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The map label for this gene is ygfA [H]

Identifier: 50084310

GI number: 50084310

Start: 1104282

End: 1104917

Strand: Reverse

Name: ygfA [H]

Synonym: ACIAD1116

Alternate gene names: 50084310

Gene position: 1104917-1104282 (Counterclockwise)

Preceding gene: 50084311

Following gene: 50084309

Centisome position: 30.7

GC content: 39.31

Gene sequence:

>636_bases
ATGAATCATGCCCTAAACCCGACCACAGAGCAGCCACTTTCCAGTCTAGAGATCAAAGCGCTCAGAAAAAAAATAATCAG
ACAACGTCGGTTTATTAATCGTTATCTTCAACTTCAGTCCGAACAAAAATGCCTGTATCAATTTCGACAGTTTTTAAAAA
ATACCCGTTTAACATCTAGTCAGAATATTGGACTGTATCTGCATGCATTTGGCGAAATTTATACGCGAAAGATAATTTTA
GAATGTTTTAAGTTGGGCAAAAAGGTTTATTTGCCCATGATCTGTAATGTGAACCAGACACTGGTCTGGATAGAAATTAC
TAAAACACAATATTTTAACCGAAGATTTTATCATCATGCTTTAGGCATGAAAGAACCGATGGCCAGTCGAGGTCATCATG
TATCACATCTTGACCTACTGCTTATGCCTTTGGTTGCCTGCGATGATCAAGGTACACGTATGGGTATGGGAGGTGGTTTT
TATGATCGAACGTTAGTCACTTCTTCGCATACCCCCTTTCGACTAGGTTTGGCTCATTCATTTCAATATCTCGATCAGAA
GTTGTTTCGCCAGTCTTGGGATCAGCCTCTTGATGCATTACTCACACCAGAAAAATGCTATCGTTTCAAACGTTAA

Upstream 100 bases:

>100_bases
CTGCTTATCTTTAGTAAACAATATCAAATCATTTTATACGTCTGTTCAACTTTAAATCGCGGCATTACAATAGTATGAAT
ACGTGAGGTAAACATTCGAT

Downstream 100 bases:

>100_bases
ACCATGCCCAGAGCTTGAGAATGATTAAATTCCGACTGATTTGCTCATTTTTTTGACATTTTCTATTGTCATGCCCTTGT
AATTTTTAAAATACCCATCA

Product: ligase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKIIL
ECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGF
YDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPLDALLTPEKCYRFKR

Sequences:

>Translated_211_residues
MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKIIL
ECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGF
YDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPLDALLTPEKCYRFKR
>Mature_211_residues
MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSSQNIGLYLHAFGEIYTRKIIL
ECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHALGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGF
YDRTLVTSSHTPFRLGLAHSFQYLDQKLFRQSWDQPLDALLTPEKCYRFKR

Specific function: Unknown

COG id: COG0212

COG function: function code H; 5-formyltetrahydrofolate cyclo-ligase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 5-formyltetrahydrofolate cyclo-ligase family [H]

Homologues:

Organism=Escherichia coli, GI1789278, Length=191, Percent_Identity=32.4607329842932, Blast_Score=86, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002698 [H]

Pfam domain/function: PF01812 5-FTHF_cyc-lig [H]

EC number: NA

Molecular weight: Translated: 24947; Mature: 24947

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA
CCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECHHHHHHHHHHHH
LGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS
CCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCEEHHHHHH
FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR
HHHHHHHHHHHHCCCCHHHHCCHHHHHCCCC
>Mature Secondary Structure
MNHALNPTTEQPLSSLEIKALRKKIIRQRRFINRYLQLQSEQKCLYQFRQFLKNTRLTSS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCC
QNIGLYLHAFGEIYTRKIILECFKLGKKVYLPMICNVNQTLVWIEITKTQYFNRRFYHHA
CCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEEEEECHHHHHHHHHHHH
LGMKEPMASRGHHVSHLDLLLMPLVACDDQGTRMGMGGGFYDRTLVTSSHTPFRLGLAHS
CCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEECCCCCEEHHHHHH
FQYLDQKLFRQSWDQPLDALLTPEKCYRFKR
HHHHHHHHHHHHCCCCHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]