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The map label for this gene is cobC [C]

Identifier: 50084289

GI number: 50084289

Start: 1086273

End: 1086851

Strand: Direct

Name: cobC [C]

Synonym: ACIAD1092

Alternate gene names: 50084289

Gene position: 1086273-1086851 (Clockwise)

Preceding gene: 50084288

Following gene: 50084290

Centisome position: 30.19

GC content: 37.13

Gene sequence:

>579_bases
GTGATTTATTTAATCCGGCATGCGCAAAGTATGGCTAATGTAAATGCAAGATGTACTTCGCATGCCAGTATTGCATTGAC
TGAACATGGAATTTTGCAGGCTGAGCAGCTTACACAACAGCTACCTCTGGCAGACCGGGTTTTTATTTCACCTTTTCTTC
GCACGTTCCAAACTGCAAGGCCTCTTTTGTTGAGAGATCATTTACAACCTGAAGTTGTTGAAATTCAGGAATTCTCGTAT
TTATCTGATGCCAAGTGTCACAATACAACTATAGAAGAGCGTAAACCCTTTGTAGATCGTTATTGGGCACAAGCGAATCC
TGATTATAAAGATGCCGAAGATGCTGAGTCTTTTAGAGAGTTTTATCATCGGGTTGTGGACTTTGCCCAGATCCTGAATG
GTCTTAAAGATCATTATCTCACTCAAAATTTAATGGTATTTAGTCATGGGCAATTTCTTACATTATTTAAGTTGATTGCA
TTTGAACATCAAGCATTATCAATAGATTTAATGCATAAATTTCGTGATCGCATGCTTCACGATCCAGTTAAAAATACAGA
ATTTTTTATTTATTCATAG

Upstream 100 bases:

>100_bases
CTTATGAAGTACGTGCAGATGGTGAGTTGTTGACTTGTGAACCTGCGGATGTATTACCAATGGCGCAACGTTATTTCTTG
TTTTAAGGCTAAGATAAGAC

Downstream 100 bases:

>100_bases
GGTTATCGCATGAAAATCTACACCCAACGTCTTGATGAGATTGCATCGGATCAGACCTTTGAAACACTTGAACTGACCTT
TGATACACGTCAAAAATCGC

Product: alpha-ribazole-5'-phosphatase

Products: NA

Alternate protein names: Phosphoglycerate Mutase Family Protein; Alpha-Ribazole-5-Phosphatase

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MIYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLADRVFISPFLRTFQTARPLLLRDHLQPEVVEIQEFSY
LSDAKCHNTTIEERKPFVDRYWAQANPDYKDAEDAESFREFYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTLFKLIA
FEHQALSIDLMHKFRDRMLHDPVKNTEFFIYS

Sequences:

>Translated_192_residues
MIYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLADRVFISPFLRTFQTARPLLLRDHLQPEVVEIQEFSY
LSDAKCHNTTIEERKPFVDRYWAQANPDYKDAEDAESFREFYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTLFKLIA
FEHQALSIDLMHKFRDRMLHDPVKNTEFFIYS
>Mature_192_residues
MIYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLADRVFISPFLRTFQTARPLLLRDHLQPEVVEIQEFSY
LSDAKCHNTTIEERKPFVDRYWAQANPDYKDAEDAESFREFYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTLFKLIA
FEHQALSIDLMHKFRDRMLHDPVKNTEFFIYS

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.73 [C]

Molecular weight: Translated: 22588; Mature: 22588

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLADRVFISPFLRTFQTAR
CEEEEEHHHHHHCCCCCCCCCCEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PLLLRDHLQPEVVEIQEFSYLSDAKCHNTTIEERKPFVDRYWAQANPDYKDAEDAESFRE
CHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCHHHHHHHHH
FYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTLFKLIAFEHQALSIDLMHKFRDRMLH
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPVKNTEFFIYS
CCCCCCCEEEEC
>Mature Secondary Structure
MIYLIRHAQSMANVNARCTSHASIALTEHGILQAEQLTQQLPLADRVFISPFLRTFQTAR
CEEEEEHHHHHHCCCCCCCCCCEEEEHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHCC
PLLLRDHLQPEVVEIQEFSYLSDAKCHNTTIEERKPFVDRYWAQANPDYKDAEDAESFRE
CHHHHHCCCCHHHHHHHHHHHCCCCCCCCCHHHHCCHHHHHHHCCCCCCCCHHHHHHHHH
FYHRVVDFAQILNGLKDHYLTQNLMVFSHGQFLTLFKLIAFEHQALSIDLMHKFRDRMLH
HHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
DPVKNTEFFIYS
CCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA