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The map label for this gene is 50084245

Identifier: 50084245

GI number: 50084245

Start: 1034335

End: 1034628

Strand: Direct

Name: 50084245

Synonym: ACIAD1044

Alternate gene names: NA

Gene position: 1034335-1034628 (Clockwise)

Preceding gene: 50084244

Following gene: 50084247

Centisome position: 28.74

GC content: 35.71

Gene sequence:

>294_bases
ATGAAATCTGAATTTTACCAAGGAAAAATCAAGCAATATGATGCCACAAAGGGATTTGGATTTATTGGGGGCTTAGAGCA
AGATGTTTTTTTTCATATTTCAGACTTTCCCCTTGAAGAGGGTGAGCCAAAGCGCAATGAGCGCGTAAAATTTATGGTGG
TTGAAAATAACGGTAAGTTTAAAGCAGTTAAAATCCAGCGTGTCGTTGATCAGTCTGCAAAAGCCAAAAAATCAAGAGCA
GTAGAAAATAATACTTCGATTACGTCTGCCTTACTCTCAAATTTTAAAAAATAA

Upstream 100 bases:

>100_bases
TAAAAGCAATGGCCCAGACAAGCCTGTTGATTGCTATTTTCCAGTATTGAATAAGATTAATGTATAATCCAGAAATTATG
TAACAAACTAGGTAGTCACT

Downstream 100 bases:

>100_bases
ATGACCTAAAAAATCCCTCTTGAAAGAGGGATTTTTTTGTTTAGCTTATCGAATCATCCAAATTCGGTGCTAACCAACGC
TTCGCTTCATCCATTGTCCA

Product: cold shock protein

Products: NA

Alternate protein names: Cold Shock Protein; Cold Shock/Excaliber Domain-Containing Protein CspD

Number of amino acids: Translated: 97; Mature: 97

Protein sequence:

>97_residues
MKSEFYQGKIKQYDATKGFGFIGGLEQDVFFHISDFPLEEGEPKRNERVKFMVVENNGKFKAVKIQRVVDQSAKAKKSRA
VENNTSITSALLSNFKK

Sequences:

>Translated_97_residues
MKSEFYQGKIKQYDATKGFGFIGGLEQDVFFHISDFPLEEGEPKRNERVKFMVVENNGKFKAVKIQRVVDQSAKAKKSRA
VENNTSITSALLSNFKK
>Mature_97_residues
MKSEFYQGKIKQYDATKGFGFIGGLEQDVFFHISDFPLEEGEPKRNERVKFMVVENNGKFKAVKIQRVVDQSAKAKKSRA
VENNTSITSALLSNFKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11051; Mature: 11051

Theoretical pI: Translated: 10.36; Mature: 10.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEFYQGKIKQYDATKGFGFIGGLEQDVFFHISDFPLEEGEPKRNERVKFMVVENNGKF
CCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCE
KAVKIQRVVDQSAKAKKSRAVENNTSITSALLSNFKK
EEEEHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKSEFYQGKIKQYDATKGFGFIGGLEQDVFFHISDFPLEEGEPKRNERVKFMVVENNGKF
CCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEECCCCE
KAVKIQRVVDQSAKAKKSRAVENNTSITSALLSNFKK
EEEEHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA