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The map label for this gene is yvrC [H]

Identifier: 50084176

GI number: 50084176

Start: 958057

End: 959118

Strand: Reverse

Name: yvrC [H]

Synonym: ACIAD0971

Alternate gene names: 50084176

Gene position: 959118-958057 (Counterclockwise)

Preceding gene: 50084178

Following gene: 50084175

Centisome position: 26.65

GC content: 41.9

Gene sequence:

>1062_bases
GTGTTGAGTTATTGCCCCAATATTTTTTATCTGATAATGACCACGTTATGCTTAGTGATTCAAACGGGATGTTCTCCAGC
ACAAGATCATGTACATTCACAACTGCATTCTTCAATCAGCGTAACAGATCGTGATGGAAATACCGTTCAGTTGAATCAGC
CTGCACGACGGATTGTGTGTTTATTTGAAGCCAGTGTCGATGATTTATATATGCTCGGTGCAGGCAAATCGATCATTGGA
ATCCCTGCAAAAATTTATACATCTTCAGATTTGTATCGCGCTTATTCAATTCTGGATCGACGAATTTATGAAAAAAAGAT
CGCAACGCCAAGCAACTGGGAAGCTTCGACCAATATCGAAAGTGTAGTGGCCTTACAACCAGATTTGGTCATTGTCAGCG
CAGGTCAAAAAGATGTGATCCAGATTCTGAACAGGATGCATATTCCGGTTTATTCTGTACTCTCAGAAAATCTACAACAA
ACCCGTAAAGAGCTGTTAGATCTGGGAAAACTGACAGGCAAATCTCAACGTGCCAGCGAATTGGTAGAGTTTATTGATCA
TGAAATCCAAGCGATTCAACAGCGAAATCATACGCAGTCTGATCAGAAAACCATTTATTACGGTTGGTCGGGTGGACGTA
TTTTCTCGACCTCTGGTCGCGACTCGATGCCCAATACAGTCATGACACTCGCAGGTGCTCACAATGTCGTAAATACCGCT
ATCGATCAACCGAATGTCAATCCAGAAAAGCTTATTGAATGGAACCCAGATGTCATTTTGCTCTGGAACACCAACCCGAA
ACAAATTTATCAACGTTCCGAATTAAAAACGCTCACTGCCGTAAAACAACAACACGTTTTTAATTTGAGTCCGAGTTTTT
TATTTAATCCGCATACTCCCAAAATTTTACTGGCGGCCAATCAATTGAATCACTGGGTATATCCAGCTCCACATTCTGAT
CAGGCTGCAACCCAGGACAAACTCAGAATCCTGACCCAGTTTTATGGCAAAACAGCGGCAGAACAGCTCATTCAATATGC
CAACGATGTGACCAAGGAATAA

Upstream 100 bases:

>100_bases
TGCAATTGTGGTAAATTACAATAAAATACCATCTTGTACACAAGATTGTATAAGTTAATTGACTTACTGGTCTTCTTAGT
TTTCTATGGCGTGAGATTAT

Downstream 100 bases:

>100_bases
TCTGTGAAACGTTCGTTTTTATTTTTAATTTATTTTATTCCTTTGCCACTGATTATTTTGTCATTATTGATTGGTCCCTC
TGAACAGTTTGGTATGACTG

Product: iron ABC transporter periplasmic substrate-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MLSYCPNIFYLIMTTLCLVIQTGCSPAQDHVHSQLHSSISVTDRDGNTVQLNQPARRIVCLFEASVDDLYMLGAGKSIIG
IPAKIYTSSDLYRAYSILDRRIYEKKIATPSNWEASTNIESVVALQPDLVIVSAGQKDVIQILNRMHIPVYSVLSENLQQ
TRKELLDLGKLTGKSQRASELVEFIDHEIQAIQQRNHTQSDQKTIYYGWSGGRIFSTSGRDSMPNTVMTLAGAHNVVNTA
IDQPNVNPEKLIEWNPDVILLWNTNPKQIYQRSELKTLTAVKQQHVFNLSPSFLFNPHTPKILLAANQLNHWVYPAPHSD
QAATQDKLRILTQFYGKTAAEQLIQYANDVTKE

Sequences:

>Translated_353_residues
MLSYCPNIFYLIMTTLCLVIQTGCSPAQDHVHSQLHSSISVTDRDGNTVQLNQPARRIVCLFEASVDDLYMLGAGKSIIG
IPAKIYTSSDLYRAYSILDRRIYEKKIATPSNWEASTNIESVVALQPDLVIVSAGQKDVIQILNRMHIPVYSVLSENLQQ
TRKELLDLGKLTGKSQRASELVEFIDHEIQAIQQRNHTQSDQKTIYYGWSGGRIFSTSGRDSMPNTVMTLAGAHNVVNTA
IDQPNVNPEKLIEWNPDVILLWNTNPKQIYQRSELKTLTAVKQQHVFNLSPSFLFNPHTPKILLAANQLNHWVYPAPHSD
QAATQDKLRILTQFYGKTAAEQLIQYANDVTKE
>Mature_353_residues
MLSYCPNIFYLIMTTLCLVIQTGCSPAQDHVHSQLHSSISVTDRDGNTVQLNQPARRIVCLFEASVDDLYMLGAGKSIIG
IPAKIYTSSDLYRAYSILDRRIYEKKIATPSNWEASTNIESVVALQPDLVIVSAGQKDVIQILNRMHIPVYSVLSENLQQ
TRKELLDLGKLTGKSQRASELVEFIDHEIQAIQQRNHTQSDQKTIYYGWSGGRIFSTSGRDSMPNTVMTLAGAHNVVNTA
IDQPNVNPEKLIEWNPDVILLWNTNPKQIYQRSELKTLTAVKQQHVFNLSPSFLFNPHTPKILLAANQLNHWVYPAPHSD
QAATQDKLRILTQFYGKTAAEQLIQYANDVTKE

Specific function: Probably part of an ABC transporter complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 39763; Mature: 39763

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYCPNIFYLIMTTLCLVIQTGCSPAQDHVHSQLHSSISVTDRDGNTVQLNQPARRIVC
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEEECCCHHEEEE
LFEASVDDLYMLGAGKSIIGIPAKIYTSSDLYRAYSILDRRIYEKKIATPSNWEASTNIE
EEECCCCCEEEECCCCCEEECCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
SVVALQPDLVIVSAGQKDVIQILNRMHIPVYSVLSENLQQTRKELLDLGKLTGKSQRASE
EEEEECCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LVEFIDHEIQAIQQRNHTQSDQKTIYYGWSGGRIFSTSGRDSMPNTVMTLAGAHNVVNTA
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHCHHHHHHHH
IDQPNVNPEKLIEWNPDVILLWNTNPKQIYQRSELKTLTAVKQQHVFNLSPSFLFNPHTP
CCCCCCCHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
KILLAANQLNHWVYPAPHSDQAATQDKLRILTQFYGKTAAEQLIQYANDVTKE
EEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSYCPNIFYLIMTTLCLVIQTGCSPAQDHVHSQLHSSISVTDRDGNTVQLNQPARRIVC
CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEECCCCEEEECCCHHEEEE
LFEASVDDLYMLGAGKSIIGIPAKIYTSSDLYRAYSILDRRIYEKKIATPSNWEASTNIE
EEECCCCCEEEECCCCCEEECCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHH
SVVALQPDLVIVSAGQKDVIQILNRMHIPVYSVLSENLQQTRKELLDLGKLTGKSQRASE
EEEEECCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
LVEFIDHEIQAIQQRNHTQSDQKTIYYGWSGGRIFSTSGRDSMPNTVMTLAGAHNVVNTA
HHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEECCCCCCCCCHHHHHHCHHHHHHHH
IDQPNVNPEKLIEWNPDVILLWNTNPKQIYQRSELKTLTAVKQQHVFNLSPSFLFNPHTP
CCCCCCCHHHHEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCC
KILLAANQLNHWVYPAPHSDQAATQDKLRILTQFYGKTAAEQLIQYANDVTKE
EEEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]