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The map label for this gene is yxkH [H]

Identifier: 50083835

GI number: 50083835

Start: 590113

End: 590868

Strand: Direct

Name: yxkH [H]

Synonym: ACIAD0600

Alternate gene names: 50083835

Gene position: 590113-590868 (Clockwise)

Preceding gene: 50083834

Following gene: 50083836

Centisome position: 16.4

GC content: 44.97

Gene sequence:

>756_bases
ATGATGTGGTTGCTATATGTCATCATCGGTTTAGTGATTTTGGCAGGTTTGCTTTATATCATGGGCAACTATACATTCTG
GTTGCCGTATCGCTCAAACGCCTTACCGCGCATCGTGATGCTACATCAGGTCACGCCGCATGCCGAAGCCTCGGGGATGA
ATATGCCACCCGACAAGTTTGAGCAATTGCTACAATTGCTGGTGAAAAAAAACGCGGTATTTTGCTTTGTATCTGAACTT
GAGCAATATCGTGAGCAAAAAAATGTGGTGGCGCTAAGCTTTGATGATGGATTTATGGACAATTACGTGTACGCCTTTCC
ACTCTTAAAAAAATATCAAGCCAAAGCGACGATCTATCTGGCAACCCAGATTGAAGGCATCGAAGCATTGACCGTCGATC
AGGTGCAGGAGATGGCTCGATCAGGTTTTATTGAGTTTGGGGCACACACGCAGCATCATGTGAATTTATTAAAACTCGAT
GACGAAACGGCCTATCAGGAAATGCTGCATTCCAAACAGGATGTAGAGACGCTAGTAGGAGCATGTCCGAGTTTTGCCTA
TCCATTTGGCCGTTTTAATGAAAAGCATCAACAGATGGCCCGTAAGATTGGTTTTAAAAATGCCGTGTCTACACGTAAAA
AGATTGAGCCCTATGATCCAGAGCATCCATTTAATATTCCGCGCGTGAGTACCCACGGCGCAATGAATGCCCTGCAAATG
CGCATTGCGCTTGCCAAAGGACGCTATAAACTATGA

Upstream 100 bases:

>100_bases
GTGACTCATTTAATGCGAAACGGATTACTCAGTATATGCTTGAGGTCACGTTTGGTCAGCCACTTTCAGAAGCTTATGAA
TGGTCGCACGAGGTATATAC

Downstream 100 bases:

>100_bases
TCCCTAAAATTGCGTGTAGCGTGTATATCGTGACCCTTAATTGTGAGGCGTGGTTATTCAAGACCTTGCAAAGTGTGCAA
GATTTTGATGAAGTCATTAT

Product: polysaccharide deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFEQLLQLLVKKNAVFCFVSEL
EQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLD
DETAYQEMLHSKQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
RIALAKGRYKL

Sequences:

>Translated_251_residues
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFEQLLQLLVKKNAVFCFVSEL
EQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLD
DETAYQEMLHSKQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
RIALAKGRYKL
>Mature_251_residues
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKFEQLLQLLVKKNAVFCFVSEL
EQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYLATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLD
DETAYQEMLHSKQDVETLVGACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
RIALAKGRYKL

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide deacetylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 28827; Mature: 28827

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHH
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL
HHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG
EEEECCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHH
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
RIALAKGRYKL
HHHHHCCCCCC
>Mature Secondary Structure
MMWLLYVIIGLVILAGLLYIMGNYTFWLPYRSNALPRIVMLHQVTPHAEASGMNMPPDKF
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHH
EQLLQLLVKKNAVFCFVSELEQYREQKNVVALSFDDGFMDNYVYAFPLLKKYQAKATIYL
HHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHCCCEEEEE
ATQIEGIEALTVDQVQEMARSGFIEFGAHTQHHVNLLKLDDETAYQEMLHSKQDVETLVG
EEEECCCHHHHHHHHHHHHHCCCEECCCCCCCCEEEEEECCHHHHHHHHHCHHHHHHHHH
ACPSFAYPFGRFNEKHQQMARKIGFKNAVSTRKKIEPYDPEHPFNIPRVSTHGAMNALQM
CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
RIALAKGRYKL
HHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]