Click here to switch to the map view.

The map label for this gene is uidR [C]

Identifier: 50083743

GI number: 50083743

Start: 496193

End: 496882

Strand: Direct

Name: uidR [C]

Synonym: ACIAD0504

Alternate gene names: 50083743

Gene position: 496193-496882 (Clockwise)

Preceding gene: 50083738

Following gene: 50083744

Centisome position: 13.79

GC content: 38.41

Gene sequence:

>690_bases
ATGTCTGTATCAAAAGTACTTAAAACTAAAGATCGTATCTTACAGATCAGTTTGCAACTGTTTAACGAACGTGGAGAACG
TTCTGTGACGACCAATCATATTGCTGCTGAACTGGGGATCAGTCCAGGCAATCTTTATTACCATTTCAGAAACAAACAAG
AAATTATCAAAGAACTCATGGAGCATTATCAGAAGGAAACGCTTGAGATGTTGGCACTTCCCGAAGATCGACTTTTAAAT
GCAAATGACAAAATCCGTTATTTTCAGGTGTTGAGTGGACAGTTATGGCAATACCGTTTTTTACATCGAGATGTTTATCA
TCTGGTTGAAAATAATGATGATTTTAAAAAGATTTATCCAAAATTTGCTGGGCAGGTGATGCAGCAAGGTCAAAAGATTT
ATCAGGCTTTTGTCGATGCTGGACTCATGAAAATGACCACCTCGGAAATTGAAGCGCTGATTATTAATCTTTGGATTGTA
CTAACCAACTGGACTAATTTTCTGTATATGTCTGGACATATCAGTGATAGTAATCATCTGGAAGAAAAGTGGGTATGGCA
GGCATTACGTCAGATGGTGTTTTTGGAAGGGCCTTATTTGATGGGGGAAAGCCGTGAAACTTATGAGCGCTTACTCGAAA
GTTTTGGGCAATCTGAATTGTTTGCGAGTCTGTCGTTGAAAAGTGAGTAA

Upstream 100 bases:

>100_bases
AAATTTAGCTATACTATATTTTTTAGAGTAAATACTCTAAAGAGTCAAGTCTGTTTCTGTGTTAGTTTTCTAACCTATTG
AATATCAACGGTTACTAAGA

Downstream 100 bases:

>100_bases
TTGATGAGCCCTATTCAGTCTGAGATAAAAACGCGCTAGAATAATCGGCTTGTTTTTTAACTGACCTATAGTGATATTAA
TCAAATGAACACCACTACTG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; Transcriptional Regulator PhaD; Transcriptional Regulator TetR Family Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; Transcriptional Reguator TetR Family; HTH-Type Transcriptional Regulator TetR-Family; HTH-Type Transcriptional Regulator; Transcriptional Regulator Transcription Regulator Protein; Transcriptional Regulator Tetr Family; TetR/AcrR Family Transcriptional Regulator

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSVSKVLKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQEIIKELMEHYQKETLEMLALPEDRLLN
ANDKIRYFQVLSGQLWQYRFLHRDVYHLVENNDDFKKIYPKFAGQVMQQGQKIYQAFVDAGLMKMTTSEIEALIINLWIV
LTNWTNFLYMSGHISDSNHLEEKWVWQALRQMVFLEGPYLMGESRETYERLLESFGQSELFASLSLKSE

Sequences:

>Translated_229_residues
MSVSKVLKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQEIIKELMEHYQKETLEMLALPEDRLLN
ANDKIRYFQVLSGQLWQYRFLHRDVYHLVENNDDFKKIYPKFAGQVMQQGQKIYQAFVDAGLMKMTTSEIEALIINLWIV
LTNWTNFLYMSGHISDSNHLEEKWVWQALRQMVFLEGPYLMGESRETYERLLESFGQSELFASLSLKSE
>Mature_228_residues
SVSKVLKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQEIIKELMEHYQKETLEMLALPEDRLLNA
NDKIRYFQVLSGQLWQYRFLHRDVYHLVENNDDFKKIYPKFAGQVMQQGQKIYQAFVDAGLMKMTTSEIEALIINLWIVL
TNWTNFLYMSGHISDSNHLEEKWVWQALRQMVFLEGPYLMGESRETYERLLESFGQSELFASLSLKSE

Specific function: Repressor For The Uidrabc (Gusrabc) Operon. [C]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27039; Mature: 26908

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSKVLKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQEIIKELM
CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
EHYQKETLEMLALPEDRLLNANDKIRYFQVLSGQLWQYRFLHRDVYHLVENNDDFKKIYP
HHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KFAGQVMQQGQKIYQAFVDAGLMKMTTSEIEALIINLWIVLTNWTNFLYMSGHISDSNHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
EEKWVWQALRQMVFLEGPYLMGESRETYERLLESFGQSELFASLSLKSE
HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SVSKVLKTKDRILQISLQLFNERGERSVTTNHIAAELGISPGNLYYHFRNKQEIIKELM
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHH
EHYQKETLEMLALPEDRLLNANDKIRYFQVLSGQLWQYRFLHRDVYHLVENNDDFKKIYP
HHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
KFAGQVMQQGQKIYQAFVDAGLMKMTTSEIEALIINLWIVLTNWTNFLYMSGHISDSNHL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHH
EEKWVWQALRQMVFLEGPYLMGESRETYERLLESFGQSELFASLSLKSE
HHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA