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The map label for this gene is 50083735

Identifier: 50083735

GI number: 50083735

Start: 490496

End: 490756

Strand: Direct

Name: 50083735

Synonym: ACIAD0496

Alternate gene names: NA

Gene position: 490496-490756 (Clockwise)

Preceding gene: 50083734

Following gene: 50083736

Centisome position: 13.63

GC content: 41.76

Gene sequence:

>261_bases
ATGAAAATTTTAGTTCGTAATCTTGAGCGTTCTGTGACTGAACAGGAGCTTCTTGAGTTGTTTCAACCTTTTGGTCAAGT
CGCGTCTTGTACACTGGTTTTGGATCAGAAGACGGGCAAATCCAAAGGGTTTGGCTTCGTTGAAATGCCGCATGCACGCG
AGGCCATTAAGGCGATTAAAGGTTTAAATACGTTTAAAGTAAAAGGTGCTGGCATTCGAGTTAAGGCAGCAGATGAGCAA
AACAACCAAAATAATGCTTAA

Upstream 100 bases:

>100_bases
GTTCGGCAGAAACGATTTAGTTTTGGGATTGATCTCGAGTAAACTGCCGCTAAGATGTAGGCTACTCTACATTGCCATTT
ATTTTGACATAAGGTTGTAT

Downstream 100 bases:

>100_bases
AGATGCTTGGGCTTTGTCAATCGTTGCACCTAGTGGGACGCGTATCGCACAAGGACTAAAGACTTTGGAAGTGCGATCAT
GGAGACCTGATGTTCTTCCA

Product: RNA-binding protein

Products: NA

Alternate protein names: RNA Recognition Motif-Containing Protein

Number of amino acids: Translated: 86; Mature: 86

Protein sequence:

>86_residues
MKILVRNLERSVTEQELLELFQPFGQVASCTLVLDQKTGKSKGFGFVEMPHAREAIKAIKGLNTFKVKGAGIRVKAADEQ
NNQNNA

Sequences:

>Translated_86_residues
MKILVRNLERSVTEQELLELFQPFGQVASCTLVLDQKTGKSKGFGFVEMPHAREAIKAIKGLNTFKVKGAGIRVKAADEQ
NNQNNA
>Mature_86_residues
MKILVRNLERSVTEQELLELFQPFGQVASCTLVLDQKTGKSKGFGFVEMPHAREAIKAIKGLNTFKVKGAGIRVKAADEQ
NNQNNA

Specific function: Unknown

COG id: COG0724

COG function: function code R; RNA-binding proteins (RRM domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI35493811, Length=86, Percent_Identity=34.8837209302326, Blast_Score=65, Evalue=1e-11,
Organism=Homo sapiens, GI4757926, Length=86, Percent_Identity=34.8837209302326, Blast_Score=63, Evalue=5e-11,
Organism=Drosophila melanogaster, GI24582417, Length=84, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI45550943, Length=84, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24582419, Length=84, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24582423, Length=84, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24582421, Length=84, Percent_Identity=35.7142857142857, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI19920866, Length=84, Percent_Identity=35.7142857142857, Blast_Score=64, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24582412, Length=84, Percent_Identity=35.7142857142857, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9502; Mature: 9502

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: PS50102 RRM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVRNLERSVTEQELLELFQPFGQVASCTLVLDQKTGKSKGFGFVEMPHAREAIKAIK
CCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEECCHHHHHHHHHH
GLNTFKVKGAGIRVKAADEQNNQNNA
CCCCEEECCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MKILVRNLERSVTEQELLELFQPFGQVASCTLVLDQKTGKSKGFGFVEMPHAREAIKAIK
CCHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEEECCCCCCCCCCEEECCHHHHHHHHHH
GLNTFKVKGAGIRVKAADEQNNQNNA
CCCCEEECCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA