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The map label for this gene is rpmE2

Identifier: 50083679

GI number: 50083679

Start: 423252

End: 423500

Strand: Reverse

Name: rpmE2

Synonym: ACIAD0425

Alternate gene names: 50083679

Gene position: 423500-423252 (Counterclockwise)

Preceding gene: 50083680

Following gene: 50083678

Centisome position: 11.77

GC content: 40.56

Gene sequence:

>249_bases
ATGAGACAAGGTATCCATCCAGAGTATCAACAAGTTTTGTTCCACGATACCAATGCAGACGCGTATTTTATTATTGGTAG
TACCATCCAAACCAAACAAACACGTGAATACGAAGGTAAGGTTTATCCTTACGTCACACTTGATATCTCAAGTGCATCGC
ATCCGTTTTACACTGGTGAAGTACGTCAAGCAAGCAATGAAGGTCGTGTTGCCACATTCAATAAACGCTTTAGCCGTTTC
AAACGTTAA

Upstream 100 bases:

>100_bases
ATTAACTAATTGATACAGGTATCTGCATAGAGATCATTGACTATACAAAATGAAATAATATAACATTACATAGTTAGGCA
AGAATAAATTTGAGGTTAAT

Downstream 100 bases:

>100_bases
TTTTTCCTTAAGTTTATTCATCTAAACTTATTGTATTGGAAGCCTATGGAACTATCTCCTCCACCTGGGCTTCTTTTTTT
GTCTACATTTTCTTTATACC

Product: 50S ribosomal protein L31 type B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MRQGIHPEYQQVLFHDTNADAYFIIGSTIQTKQTREYEGKVYPYVTLDISSASHPFYTGEVRQASNEGRVATFNKRFSRF
KR

Sequences:

>Translated_82_residues
MRQGIHPEYQQVLFHDTNADAYFIIGSTIQTKQTREYEGKVYPYVTLDISSASHPFYTGEVRQASNEGRVATFNKRFSRF
KR
>Mature_82_residues
MRQGIHPEYQQVLFHDTNADAYFIIGSTIQTKQTREYEGKVYPYVTLDISSASHPFYTGEVRQASNEGRVATFNKRFSRF
KR

Specific function: Unknown

COG id: COG0254

COG function: function code J; Ribosomal protein L31

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L31P family. Type B subfamily

Homologues:

Organism=Escherichia coli, GI2367109, Length=80, Percent_Identity=58.75, Blast_Score=106, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL31B_ACIAD (Q6FEZ1)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_045189.1
- ProteinModelPortal:   Q6FEZ1
- SMR:   Q6FEZ1
- STRING:   Q6FEZ1
- GeneID:   2879173
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD0425
- NMPDR:   fig|62977.3.peg.1026
- eggNOG:   COG0254
- HOGENOM:   HBG610087
- OMA:   YRTVLFH
- PhylomeDB:   Q6FEZ1
- ProtClustDB:   PRK01678
- BioCyc:   ASP62977:ACIAD0425-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00502
- InterPro:   IPR002150
- PRINTS:   PR01249
- TIGRFAMs:   TIGR00105

Pfam domain/function: PF01197 Ribosomal_L31

EC number: NA

Molecular weight: Translated: 9581; Mature: 9581

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS01143 RIBOSOMAL_L31

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQGIHPEYQQVLFHDTNADAYFIIGSTIQTKQTREYEGKVYPYVTLDISSASHPFYTGE
CCCCCCCCCCEEEEECCCCCEEEEECCEECCCCCCCCCCEECCEEEEEECCCCCCEEECC
VRQASNEGRVATFNKRFSRFKR
EECCCCCCCEEEHHHHHHHHCC
>Mature Secondary Structure
MRQGIHPEYQQVLFHDTNADAYFIIGSTIQTKQTREYEGKVYPYVTLDISSASHPFYTGE
CCCCCCCCCCEEEEECCCCCEEEEECCEECCCCCCCCCCEECCEEEEEECCCCCCEEECC
VRQASNEGRVATFNKRFSRFKR
EECCCCCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA