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The map label for this gene is recN [H]

Identifier: 50083616

GI number: 50083616

Start: 346630

End: 348291

Strand: Reverse

Name: recN [H]

Synonym: ACIAD0354

Alternate gene names: 50083616

Gene position: 348291-346630 (Counterclockwise)

Preceding gene: 50083621

Following gene: 50083615

Centisome position: 9.68

GC content: 44.16

Gene sequence:

>1662_bases
ATGCTGACACATTTAACTTTAATTAATTTTGCTTTGGCAGATCACCTCGCACTCGATATTGAACAGGGATTTAATGTTCT
GACTGGTGAAACTGGTGCAGGAAAATCATTACTTCTGGATGCCCTCTCGGCCAGTCTGGGAGAACGTACAGATACCAACT
ATGTTCGATACGGTGCCGAGAAAGCCGATATCAGTGCAACGTTTAGTTATAAAAATTATAGTCCTGAAGCCGAGTGGCTC
AAAGAACATGAGCTCGATGATGAATCTGAAGAAATTCATTTGCGTCGTGTCATTTTTGCGACTGGTCGTAGCAAAGCATG
GATCAATGGCCGTCCAAGCAGTTTATCTGAACTGAAAGAACTCGGACGGTTACTGGTTCAGTTATACAGCCAGCACAGTC
AGCAACAGCTATTAGAACCGCCTTACCCAAAACACTGGCTAGACCGTTACAGCAACTTTTATGCTCCAGCACAGGAAGTC
AAAACAGCTTATAGCGTATGGCAAAGTACGATTCGTCAGCATCAAGCCGCGCTAGATGCTCAGGCAACGCGTCAGCAACG
TATTGCAGCGCTAGAATTACAACTTGAAGAGCTCGAAGATATTGTTCAAATTGATTATAAAGACATCGAACAGGAATTTG
ACCGCTTAAGCCATCATGAACATATCATGCAGGATTGTGCCTACAGCTTAAATCTGCTGGATGAAGCTGAGCCAAACATT
ACACAAGAACTGTCATCGTTATTACGCCGTATCGAATCCCATGCAGGACGCAGCGAACAACTTTCAGAAATTTATAATTC
ACTGGTCAACGCCCAAAGTGAAATTGAGGATGCAACTTCAAACTTACGCCAGTTCATGGACCGGCAGAGCTTTGATCCTG
CACGCATGGAAGAACTTAACAGTACACTTGAAAGTTTCCACCGTCTGGCACGAAAATACCGCACTCAACCAGAACAGTTA
AAACAGGACTATGCTGAATGGCAGGCAGAACTGGATCAACTGCATCAACTTGAGGATCCAGAAACACTTGCCGAACAGGT
CGATCTTGCACATCAGCAATTTCTGGAAAAAGCCAAATATTTGGATCAAATCCGTCGTGAGGCTGCCCTTCCTTTGGCCA
AACAACTCACTGAACAAGTCAAGCCACTTGCGTTGCCCGAAGCTCATTTCGAGTTTAAGTTTGAACCCTTAGAACAACCC
AATGCTGAGGGTCTAAGTTTCATCCAGCTTCTATTTACTGCCAATAAAGGTATTCCACCGCAACCACTGGCACGTGTTGC
ATCTGGTGGTGAGTTATCCCGTATTGCCTTGGTCATGCAGGTGATGAATGCCGAAAAAACTGAGTCAGAAGTCTTGGTCT
TTGATGAAATTGATGTCGGAATTAGTGGAGGCACAGCAGAAGTAGTAGGTCGACTACTGGCAGATCTGGCTCAACATGTG
CAATTGCTTTGTATCACACATCAGGCACAGGTTGCCGCTCAGTCAGATCAACATCTTTTGGTCAAAAAACAGCAAACAGA
TCCAGCCAGCAGTACCATTGTTAAACTGGATGAAGAACAGCGTATTTTTGAACTGGCACGTATGTCAGGTGGTGTAGAAA
TTAATGAAACGACTTTACAGCATGCAAAACAGCTAAGACGCTTGAAATTTCAACATTCATAA

Upstream 100 bases:

>100_bases
CTTGCTATTCTTATACTGGACTTAGAATAACGAATGTCTTGTGACAAGTCCAAAACTTCTCTATCTTAGACAAAAAACTC
TTGGCGCCCTGGATGCGTTT

Downstream 100 bases:

>100_bases
GTATTAAACTGTGAAATAAATCAAGGAAAACGATTGGCGAAACCCATTTACTCTTGTATGTTGATATGAAGAATCTATAT
TTCAACACGACCTGAATTTA

Product: protein used in recombination and DNA repair

Products: NA

Alternate protein names: Recombination protein N [H]

Number of amino acids: Translated: 553; Mature: 553

Protein sequence:

>553_residues
MLTHLTLINFALADHLALDIEQGFNVLTGETGAGKSLLLDALSASLGERTDTNYVRYGAEKADISATFSYKNYSPEAEWL
KEHELDDESEEIHLRRVIFATGRSKAWINGRPSSLSELKELGRLLVQLYSQHSQQQLLEPPYPKHWLDRYSNFYAPAQEV
KTAYSVWQSTIRQHQAALDAQATRQQRIAALELQLEELEDIVQIDYKDIEQEFDRLSHHEHIMQDCAYSLNLLDEAEPNI
TQELSSLLRRIESHAGRSEQLSEIYNSLVNAQSEIEDATSNLRQFMDRQSFDPARMEELNSTLESFHRLARKYRTQPEQL
KQDYAEWQAELDQLHQLEDPETLAEQVDLAHQQFLEKAKYLDQIRREAALPLAKQLTEQVKPLALPEAHFEFKFEPLEQP
NAEGLSFIQLLFTANKGIPPQPLARVASGGELSRIALVMQVMNAEKTESEVLVFDEIDVGISGGTAEVVGRLLADLAQHV
QLLCITHQAQVAAQSDQHLLVKKQQTDPASSTIVKLDEEQRIFELARMSGGVEINETTLQHAKQLRRLKFQHS

Sequences:

>Translated_553_residues
MLTHLTLINFALADHLALDIEQGFNVLTGETGAGKSLLLDALSASLGERTDTNYVRYGAEKADISATFSYKNYSPEAEWL
KEHELDDESEEIHLRRVIFATGRSKAWINGRPSSLSELKELGRLLVQLYSQHSQQQLLEPPYPKHWLDRYSNFYAPAQEV
KTAYSVWQSTIRQHQAALDAQATRQQRIAALELQLEELEDIVQIDYKDIEQEFDRLSHHEHIMQDCAYSLNLLDEAEPNI
TQELSSLLRRIESHAGRSEQLSEIYNSLVNAQSEIEDATSNLRQFMDRQSFDPARMEELNSTLESFHRLARKYRTQPEQL
KQDYAEWQAELDQLHQLEDPETLAEQVDLAHQQFLEKAKYLDQIRREAALPLAKQLTEQVKPLALPEAHFEFKFEPLEQP
NAEGLSFIQLLFTANKGIPPQPLARVASGGELSRIALVMQVMNAEKTESEVLVFDEIDVGISGGTAEVVGRLLADLAQHV
QLLCITHQAQVAAQSDQHLLVKKQQTDPASSTIVKLDEEQRIFELARMSGGVEINETTLQHAKQLRRLKFQHS
>Mature_553_residues
MLTHLTLINFALADHLALDIEQGFNVLTGETGAGKSLLLDALSASLGERTDTNYVRYGAEKADISATFSYKNYSPEAEWL
KEHELDDESEEIHLRRVIFATGRSKAWINGRPSSLSELKELGRLLVQLYSQHSQQQLLEPPYPKHWLDRYSNFYAPAQEV
KTAYSVWQSTIRQHQAALDAQATRQQRIAALELQLEELEDIVQIDYKDIEQEFDRLSHHEHIMQDCAYSLNLLDEAEPNI
TQELSSLLRRIESHAGRSEQLSEIYNSLVNAQSEIEDATSNLRQFMDRQSFDPARMEELNSTLESFHRLARKYRTQPEQL
KQDYAEWQAELDQLHQLEDPETLAEQVDLAHQQFLEKAKYLDQIRREAALPLAKQLTEQVKPLALPEAHFEFKFEPLEQP
NAEGLSFIQLLFTANKGIPPQPLARVASGGELSRIALVMQVMNAEKTESEVLVFDEIDVGISGGTAEVVGRLLADLAQHV
QLLCITHQAQVAAQSDQHLLVKKQQTDPASSTIVKLDEEQRIFELARMSGGVEINETTLQHAKQLRRLKFQHS

Specific function: May be involved in recombinational repair of damaged DNA [H]

COG id: COG0497

COG function: function code L; ATPase involved in DNA repair

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recN family [H]

Homologues:

Organism=Escherichia coli, GI48994901, Length=557, Percent_Identity=39.3177737881508, Blast_Score=355, Evalue=5e-99,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004604
- InterPro:   IPR003395 [H]

Pfam domain/function: PF02463 SMC_N [H]

EC number: NA

Molecular weight: Translated: 62992; Mature: 62992

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTHLTLINFALADHLALDIEQGFNVLTGETGAGKSLLLDALSASLGERTDTNYVRYGAE
CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCC
KADISATFSYKNYSPEAEWLKEHELDDESEEIHLRRVIFATGRSKAWINGRPSSLSELKE
HHCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHH
LGRLLVQLYSQHSQQQLLEPPYPKHWLDRYSNFYAPAQEVKTAYSVWQSTIRQHQAALDA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QATRQQRIAALELQLEELEDIVQIDYKDIEQEFDRLSHHEHIMQDCAYSLNLLDEAEPNI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TQELSSLLRRIESHAGRSEQLSEIYNSLVNAQSEIEDATSNLRQFMDRQSFDPARMEELN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
STLESFHRLARKYRTQPEQLKQDYAEWQAELDQLHQLEDPETLAEQVDLAHQQFLEKAKY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDQIRREAALPLAKQLTEQVKPLALPEAHFEFKFEPLEQPNAEGLSFIQLLFTANKGIPP
HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCC
QPLARVASGGELSRIALVMQVMNAEKTESEVLVFDEIDVGISGGTAEVVGRLLADLAQHV
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
QLLCITHQAQVAAQSDQHLLVKKQQTDPASSTIVKLDEEQRIFELARMSGGVEINETTLQ
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCEEHHHHHH
HAKQLRRLKFQHS
HHHHHHHHHCCCC
>Mature Secondary Structure
MLTHLTLINFALADHLALDIEQGFNVLTGETGAGKSLLLDALSASLGERTDTNYVRYGAE
CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHHCCCCCCCHHHCCCC
KADISATFSYKNYSPEAEWLKEHELDDESEEIHLRRVIFATGRSKAWINGRPSSLSELKE
HHCCEEEEECCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHH
LGRLLVQLYSQHSQQQLLEPPYPKHWLDRYSNFYAPAQEVKTAYSVWQSTIRQHQAALDA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
QATRQQRIAALELQLEELEDIVQIDYKDIEQEFDRLSHHEHIMQDCAYSLNLLDEAEPNI
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
TQELSSLLRRIESHAGRSEQLSEIYNSLVNAQSEIEDATSNLRQFMDRQSFDPARMEELN
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
STLESFHRLARKYRTQPEQLKQDYAEWQAELDQLHQLEDPETLAEQVDLAHQQFLEKAKY
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
LDQIRREAALPLAKQLTEQVKPLALPEAHFEFKFEPLEQPNAEGLSFIQLLFTANKGIPP
HHHHHHHHHCHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHHCCCCCC
QPLARVASGGELSRIALVMQVMNAEKTESEVLVFDEIDVGISGGTAEVVGRLLADLAQHV
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH
QLLCITHQAQVAAQSDQHLLVKKQQTDPASSTIVKLDEEQRIFELARMSGGVEINETTLQ
HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEEEECHHHHHHHHHHHCCCCEEHHHHHH
HAKQLRRLKFQHS
HHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 3037486; 9205837; 9278503 [H]