Click here to switch to the map view.

The map label for this gene is smf [H]

Identifier: 50083491

GI number: 50083491

Start: 204848

End: 205999

Strand: Reverse

Name: smf [H]

Synonym: ACIAD0209

Alternate gene names: 50083491

Gene position: 205999-204848 (Counterclockwise)

Preceding gene: 50083492

Following gene: 50083490

Centisome position: 5.72

GC content: 45.05

Gene sequence:

>1152_bases
ATGATTACAATACTTTCATCACATCACTACCACACCATCAAGGTGTGGTATGTATTACAGCATTCACTTTCAGGCTTCAA
AAAACTCATTCATTATTTTGGTGATTGTGAAACAGCACTACAACCCCAGCGTTTAAGTGACTGGCAAAAGCTCGGATTAC
ATGCCAATCATCTAAAGCGCCTAGAGGAAGTCCATACATTACAAGGACAGCAGCAATTCGAAAAGATGCTTGCTCAGCTT
CAAACCCATACCGATTTTATTGTGACACCCGATGATCCCGCTTATCCATCGCAGTTAATTCCCTATCAGGATCGCCCTCC
CATTCTATTTGGTCAAGGCTCAATACAAAGCCTGATCCAACCACAAATTGCAGTCGTGGGTAGTCGTAAACCCAGCCCTC
ATGGTCGACAGGTAGCATATGACTTTTCTTATTTTTTAAGTGAAAAAGGTTTTTATATTACCAGCGGTTTAGCCCATGGA
ATTGATGAAGCTGCACATCAGGGGAGTCTGGTACACCACCGCGCAATAGCTGTGGTCGGAACAGGGTTAGATCTATGCTA
TCCATCAGGCAATAAAGCCTTGAAACAGCACATACGAGATCAGGGTGGTGCGATCGTTAGTGAATTCTTGCCAGGAACAC
CACCTTTACAAGCCCATTTTCCGCGACGCAACCGTATCGTGAGTGGCTTAAGTCTAGGTGTTCTGGTGGTTGAAGCGACA
TTGAAAAGTGGCTCATTAATTACCGCCAATAAAGCGGCAGAACAAGGTAAAGTTGTTTTTGCGATTCCAGGCCATATTTA
TAGTGAGTTTCATCAAGGCTGCCATCAACTGATTCGCGAAGGTGCGATTTTAGTCGATCACCCCGAACAGATCATTGAAG
ACCTGGCACTTCCGACCCATTGGCATAGTCAGTCTACTGCATCGGGAGAAGCCAATGCCGATGATTCAGGCAAAACCGAT
GATGCTGATTTACCTGATGACTTGCTTCCCCTCTATCAGCTTCTAGACTGGCAAGGTCAAGATCTGGATCAGTTGGCACA
ACACTATCAGGGTTCAACAGCCGAACTAACAGCTCAATTGATGGAACTTGAACTACTGGGTGTGTGTATTCAACAATCAG
GTCGCTATCTGCGTTGTAGAAGCCCCTATTAA

Upstream 100 bases:

>100_bases
AATTAAGTTATGCTTATATTCTTGAAAGCAGCCTACCAGTCAAGGTAGGGGCAGAAATAAAACCACCTCGTGAAGAGGAT
TAACACTTTTTTATATTTTT

Downstream 100 bases:

>100_bases
GGTTCACAATGAGTTTATTTTTAAGTTTGGAGTTTGATTATGCTGACTACCTCAGTCGCTGAAGCCGCACATTGTTTAAA
GCAGGGACAGGTTTTGGCAT

Product: Rossmann-fold nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MITILSSHHYHTIKVWYVLQHSLSGFKKLIHYFGDCETALQPQRLSDWQKLGLHANHLKRLEEVHTLQGQQQFEKMLAQL
QTHTDFIVTPDDPAYPSQLIPYQDRPPILFGQGSIQSLIQPQIAVVGSRKPSPHGRQVAYDFSYFLSEKGFYITSGLAHG
IDEAAHQGSLVHHRAIAVVGTGLDLCYPSGNKALKQHIRDQGGAIVSEFLPGTPPLQAHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKVVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTHWHSQSTASGEANADDSGKTD
DADLPDDLLPLYQLLDWQGQDLDQLAQHYQGSTAELTAQLMELELLGVCIQQSGRYLRCRSPY

Sequences:

>Translated_383_residues
MITILSSHHYHTIKVWYVLQHSLSGFKKLIHYFGDCETALQPQRLSDWQKLGLHANHLKRLEEVHTLQGQQQFEKMLAQL
QTHTDFIVTPDDPAYPSQLIPYQDRPPILFGQGSIQSLIQPQIAVVGSRKPSPHGRQVAYDFSYFLSEKGFYITSGLAHG
IDEAAHQGSLVHHRAIAVVGTGLDLCYPSGNKALKQHIRDQGGAIVSEFLPGTPPLQAHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKVVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTHWHSQSTASGEANADDSGKTD
DADLPDDLLPLYQLLDWQGQDLDQLAQHYQGSTAELTAQLMELELLGVCIQQSGRYLRCRSPY
>Mature_383_residues
MITILSSHHYHTIKVWYVLQHSLSGFKKLIHYFGDCETALQPQRLSDWQKLGLHANHLKRLEEVHTLQGQQQFEKMLAQL
QTHTDFIVTPDDPAYPSQLIPYQDRPPILFGQGSIQSLIQPQIAVVGSRKPSPHGRQVAYDFSYFLSEKGFYITSGLAHG
IDEAAHQGSLVHHRAIAVVGTGLDLCYPSGNKALKQHIRDQGGAIVSEFLPGTPPLQAHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKVVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTHWHSQSTASGEANADDSGKTD
DADLPDDLLPLYQLLDWQGQDLDQLAQHYQGSTAELTAQLMELELLGVCIQQSGRYLRCRSPY

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=315, Percent_Identity=41.2698412698413, Blast_Score=209, Evalue=3e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 42514; Mature: 42514

Theoretical pI: Translated: 6.54; Mature: 6.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITILSSHHYHTIKVWYVLQHSLSGFKKLIHYFGDCETALQPQRLSDWQKLGLHANHLKR
CEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHH
LEEVHTLQGQQQFEKMLAQLQTHTDFIVTPDDPAYPSQLIPYQDRPPILFGQGSIQSLIQ
HHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHC
PQIAVVGSRKPSPHGRQVAYDFSYFLSEKGFYITSGLAHGIDEAAHQGSLVHHRAIAVVG
CCEEEEECCCCCCCCCEEEEHHHHHHCCCCEEEECHHHHHHHHHHHCCCHHHHHEEEEEE
TGLDLCYPSGNKALKQHIRDQGGAIVSEFLPGTPPLQAHFPRRNRIVSGLSLGVLVVEAT
CCCEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEH
LKSGSLITANKAAEQGKVVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTH
HCCCCEEEECCHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCC
WHSQSTASGEANADDSGKTDDADLPDDLLPLYQLLDWQGQDLDQLAQHYQGSTAELTAQL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
MELELLGVCIQQSGRYLRCRSPY
HHHHHHHHHHHCCCCEEEECCCC
>Mature Secondary Structure
MITILSSHHYHTIKVWYVLQHSLSGFKKLIHYFGDCETALQPQRLSDWQKLGLHANHLKR
CEEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCCCHHHHHH
LEEVHTLQGQQQFEKMLAQLQTHTDFIVTPDDPAYPSQLIPYQDRPPILFGQGSIQSLIQ
HHHHHHHCCHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCEEECCCHHHHHHC
PQIAVVGSRKPSPHGRQVAYDFSYFLSEKGFYITSGLAHGIDEAAHQGSLVHHRAIAVVG
CCEEEEECCCCCCCCCEEEEHHHHHHCCCCEEEECHHHHHHHHHHHCCCHHHHHEEEEEE
TGLDLCYPSGNKALKQHIRDQGGAIVSEFLPGTPPLQAHFPRRNRIVSGLSLGVLVVEAT
CCCEEECCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHEEEEEH
LKSGSLITANKAAEQGKVVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTH
HCCCCEEEECCHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCEEEECHHHHHHHHCCCCC
WHSQSTASGEANADDSGKTDDADLPDDLLPLYQLLDWQGQDLDQLAQHYQGSTAELTAQL
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCHHHHHHHH
MELELLGVCIQQSGRYLRCRSPY
HHHHHHHHHHHCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8432722; 8112305; 9278503 [H]