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The map label for this gene is atpD

Identifier: 50083469

GI number: 50083469

Start: 183875

End: 185269

Strand: Direct

Name: atpD

Synonym: ACIAD0187

Alternate gene names: 50083469

Gene position: 183875-185269 (Clockwise)

Preceding gene: 50083468

Following gene: 50083470

Centisome position: 5.11

GC content: 45.52

Gene sequence:

>1395_bases
ATGAGTAGCGGTCGTATCATTCAGATCATCGGCGCGGTTATCGACGTCGAGTTTGAGCGCAATAGCGTTCCTAAGATCTA
TGACGCTCTCCAAGTTGACGGTACTGAAACTACATTAGAAGTTCAGCAACAGCTTGGCGATGGTGTTGTTCGTACCATCG
CAATGGGTTCTACAGAAGGTCTTAAACGTGGTCTTAATGTAACCAGTACAAATGCACCGATTTCTGTTCCAGTTGGCCCA
GCGACGCTTGGCCGTATCATGGACGTTTTAGGTCGCCCGATTGATGAAGCAGGTCCTGTAGCGACTGAAGAGCGTTTGCC
AATTCACCGTCAAGCCCCTTCTTATGCTGAACAAGCAGCTTCGACTGACCTTTTAGAAACTGGTATTAAAGTCATCGACT
TACTTTGCCCGTTCGCGAAAGGTGGTAAAGTTGGTCTGTTCGGTGGTGCTGGTGTTGGTAAAACCGTTAACATGATGGAG
TTGATCAACAACATCGCGAAAGCTCACTCAGGTTTATCTGTGTTTGCTGGTGTTGGTGAGCGTACTCGTGAAGGTAACGA
CTTCTATCACGAAATGAAAGATTCTAACGTTCTTGACAAAGTAGCCATGGTCTACGGTCAGATGAACGAGCCACCAGGTA
ACCGTTTACGCGTAGCGTTGACTGGTTTGACCATGGCTGAATACTTCCGTGATCAAAAAGACGAAAACGGTAAAGGTCGT
GACGTATTATTATTCGTCGACAACATCTACCGTTACACACTTGCAGGTACTGAAGTATCAGCATTGTTAGGCCGTATGCC
ATCTGCAGTAGGTTACCAACCGACACTTGCAGAAGAAATGGGTGTTCTTCAAGAGCGTATTACGTCGACTAAATCTGGTT
CGATCACATCGATCCAGGCAGTATACGTACCTGCCGATGACTTAACAGATCCATCGCCTGCAACCACGTTTGCTCACTTA
GATGCAACAGTGGTATTGAGCCGTGACATCGCATCTTCTGGTATTTATCCAGCGATCGATCCACTTGACTCAACTTCACG
TCAGCTAGATCCATTGGTTGTTGGTCAAGAGCATTATGAAATTGCACGTTCTGTACAGAACGTATTGCAACGTTATAAAG
AGCTTAAAGACATCATCGCGATTTTGGGTATGGATGAATTGGCAGAAGAAGATAAGTTGGTTGTTTACCGTGCGCGTAAA
ATCCAACGCTTCTTCTCTCAACCGTTCCACGTTGCTGAAGTATTTACGGGTGCGCCTGGTAAATTAGTACCGCTTAAAGA
AACGATTCGTGGCTTTAAAGGTCTTTTAGCTGGTGAATACGATCACATCCCAGAACAAGCGTTCTACATGGTGGGTGGTA
TTGACGAAGTAATTGCTAAAGCTGAGAAACTTTAA

Upstream 100 bases:

>100_bases
CAACAAGCTGCGTCAAGCCGCGATTACTCAGGAAATTTCCGAGATCGTTGGCGGTGCCGCTGCCGTTTAACATTATTAAG
TTTGAATTGAGGAGACAGCA

Downstream 100 bases:

>100_bases
TTAGCAACTCTAATTTAGGAGGTTCTCATGGCGACGATGCAATGTGATGTCGTAAGTGTGAAAGAGTCAATTTACTCTGG
ACAAGTTACGATGTTGATCG

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta

Number of amino acids: Translated: 464; Mature: 463

Protein sequence:

>464_residues
MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVPVGP
ATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGR
DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFAHL
DATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARK
IQRFFSQPFHVAEVFTGAPGKLVPLKETIRGFKGLLAGEYDHIPEQAFYMVGGIDEVIAKAEKL

Sequences:

>Translated_464_residues
MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVPVGP
ATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMME
LINNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGR
DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFAHL
DATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARK
IQRFFSQPFHVAEVFTGAPGKLVPLKETIRGFKGLLAGEYDHIPEQAFYMVGGIDEVIAKAEKL
>Mature_463_residues
SSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEGLKRGLNVTSTNAPISVPVGPA
TLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAASTDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMEL
INNIAKAHSGLSVFAGVGERTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGRD
VLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQAVYVPADDLTDPSPATTFAHLD
ATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYEIARSVQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKI
QRFFSQPFHVAEVFTGAPGKLVPLKETIRGFKGLLAGEYDHIPEQAFYMVGGIDEVIAKAEKL

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family

Homologues:

Organism=Homo sapiens, GI32189394, Length=471, Percent_Identity=69.6390658174098, Blast_Score=669, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=323, Percent_Identity=26.9349845201238, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI19913426, Length=402, Percent_Identity=23.8805970149254, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI19913428, Length=413, Percent_Identity=24.9394673123487, Blast_Score=108, Evalue=1e-23,
Organism=Homo sapiens, GI50345984, Length=309, Percent_Identity=25.2427184466019, Blast_Score=104, Evalue=2e-22,
Organism=Homo sapiens, GI4757810, Length=309, Percent_Identity=25.2427184466019, Blast_Score=104, Evalue=2e-22,
Organism=Escherichia coli, GI1790170, Length=466, Percent_Identity=79.3991416309013, Blast_Score=756, Evalue=0.0,
Organism=Escherichia coli, GI1788251, Length=336, Percent_Identity=30.6547619047619, Blast_Score=138, Evalue=6e-34,
Organism=Escherichia coli, GI1790172, Length=346, Percent_Identity=24.8554913294798, Blast_Score=108, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI25144756, Length=471, Percent_Identity=68.1528662420382, Blast_Score=644, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17565854, Length=364, Percent_Identity=27.7472527472527, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI17510931, Length=344, Percent_Identity=25.2906976744186, Blast_Score=112, Evalue=4e-25,
Organism=Caenorhabditis elegans, GI17570191, Length=347, Percent_Identity=24.4956772334294, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=337, Percent_Identity=24.6290801186944, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988063, Length=337, Percent_Identity=24.6290801186944, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71988074, Length=363, Percent_Identity=22.3140495867769, Blast_Score=86, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6322581, Length=463, Percent_Identity=67.170626349892, Blast_Score=638, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=395, Percent_Identity=26.0759493670886, Blast_Score=118, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6319370, Length=374, Percent_Identity=25.4010695187166, Blast_Score=108, Evalue=2e-24,
Organism=Saccharomyces cerevisiae, GI6320016, Length=238, Percent_Identity=24.7899159663866, Blast_Score=76, Evalue=9e-15,
Organism=Drosophila melanogaster, GI24638766, Length=470, Percent_Identity=67.0212765957447, Blast_Score=640, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=470, Percent_Identity=64.468085106383, Blast_Score=593, Evalue=1e-170,
Organism=Drosophila melanogaster, GI24583992, Length=325, Percent_Identity=27.3846153846154, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI20129479, Length=326, Percent_Identity=26.3803680981595, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583988, Length=322, Percent_Identity=27.9503105590062, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583986, Length=322, Percent_Identity=27.9503105590062, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583984, Length=322, Percent_Identity=27.9503105590062, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281361666, Length=400, Percent_Identity=23.75, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24646341, Length=400, Percent_Identity=23.75, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI17136796, Length=400, Percent_Identity=23.75, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI24658560, Length=337, Percent_Identity=24.9258160237389, Blast_Score=105, Evalue=9e-23,
Organism=Drosophila melanogaster, GI24638768, Length=92, Percent_Identity=52.1739130434783, Blast_Score=90, Evalue=4e-18,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): ATPB_ACIAD (Q6FFK0)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_044979.1
- HSSP:   P00829
- ProteinModelPortal:   Q6FFK0
- SMR:   Q6FFK0
- STRING:   Q6FFK0
- GeneID:   2878055
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD0187
- NMPDR:   fig|62977.3.peg.274
- eggNOG:   COG0055
- HOGENOM:   HBG565875
- OMA:   IGQEHYD
- PhylomeDB:   Q6FFK0
- ProtClustDB:   PRK09280
- BioCyc:   ASP62977:ACIAD0187-MONOMER
- HAMAP:   MF_01347
- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100
- PANTHER:   PTHR15184:SF8
- SMART:   SM00382
- TIGRFAMs:   TIGR01039

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N; SSF47917 ATPase_a/b_C; SSF50615 ATPase_a/b_N

EC number: =3.6.3.14

Molecular weight: Translated: 50312; Mature: 50181

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEG
CCCCCEEEEEHHHHEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCHHH
LKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAA
HHCCCCEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
STDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCC
RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGR
CCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCC
DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQA
EEEEEEECHHEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
VYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYE
EEECCCCCCCCCCCCEEHHCCEEEEEECHHHCCCCCCCCCCCCCCHHHCCCEEECHHHHH
IARSVQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFHVAEVFTGAPG
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHCCCCC
KLVPLKETIRGFKGLLAGEYDHIPEQAFYMVGGIDEVIAKAEKL
CEECHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
SSGRIIQIIGAVIDVEFERNSVPKIYDALQVDGTETTLEVQQQLGDGVVRTIAMGSTEG
CCCCEEEEEHHHHEEEECCCCCCHHHHHHCCCCCHHHHHHHHHHCCHHHHHHHCCCHHH
LKRGLNVTSTNAPISVPVGPATLGRIMDVLGRPIDEAGPVATEERLPIHRQAPSYAEQAA
HHCCCCEECCCCCEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
STDLLETGIKVIDLLCPFAKGGKVGLFGGAGVGKTVNMMELINNIAKAHSGLSVFAGVGE
HHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEECCCCC
RTREGNDFYHEMKDSNVLDKVAMVYGQMNEPPGNRLRVALTGLTMAEYFRDQKDENGKGR
CCCCCCHHHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEHHHHHHHHHHCCCCCCCCC
DVLLFVDNIYRYTLAGTEVSALLGRMPSAVGYQPTLAEEMGVLQERITSTKSGSITSIQA
EEEEEEECHHEEEECCCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEE
VYVPADDLTDPSPATTFAHLDATVVLSRDIASSGIYPAIDPLDSTSRQLDPLVVGQEHYE
EEECCCCCCCCCCCCEEHHCCEEEEEECHHHCCCCCCCCCCCCCCHHHCCCEEECHHHHH
IARSVQNVLQRYKELKDIIAILGMDELAEEDKLVVYRARKIQRFFSQPFHVAEVFTGAPG
HHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEHHHHHHHHHHHCCCCCHHHHHCCCCC
KLVPLKETIRGFKGLLAGEYDHIPEQAFYMVGGIDEVIAKAEKL
CEECHHHHHHHHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA