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The map label for this gene is dedA [H]

Identifier: 50083434

GI number: 50083434

Start: 148593

End: 149279

Strand: Reverse

Name: dedA [H]

Synonym: ACIAD0148

Alternate gene names: 50083434

Gene position: 149279-148593 (Counterclockwise)

Preceding gene: 50083438

Following gene: 50083421

Centisome position: 4.15

GC content: 40.17

Gene sequence:

>687_bases
CTGCTAGGATTTGAACACGCTTTTGTGCTGTTGTGTCTCATGGAACTGTTTGATTTTATTTTGCACGTAGATGAACATCT
ACTTGAATTTGTTCGTAATTATGGGGTATGGATTTACGCCATTCTATTTCTGATTATTTTTGTAGAAACAGGCTTAGTCG
TCATGCCTTTTTTACCTGGCGATAGCTTACTATTTGCGGCAGGAGCTTTGGCAGCATCGACGGGCGCAATGGATCCATGG
GTGCTGGGTGTTCTATTATTTATTGCCGCAGTACTGGGTGATACACTGAATTATCACATTGGTCGTTATATTGGACCACG
CGTGTTTGAAACCAATTCACGATTTATCAATAAAGCGCATCTCACCAAGACACATCAGTTTTTTGAACGTCATGGTGGTA
AAACTATTATTTTTGCGCGCTTTATTCCTTTTGCTCGTACCTTTGCACCCTTTGTTGCAGGTGCAGGCAGTATGAACTAT
AAATTCTTTCTGACTTATAATGCGATTGGTGCGTTCTGCTGGATTGCGTCTTTTATTACACTTGGCTATTTGTTTGGAAA
TATGCCTGTTGTCAAAGACAATTTTACCCATTTGATTTTCGGAATCATTATCTTGAGCGTGCTTCCTGCGATTATTGGGT
TCATACGTCAAAAGCTAGGCAGCAAAGTAAAAGACAAACGGATTTAG

Upstream 100 bases:

>100_bases
TGCAATAAATATGCAAATGAAAGACTCATCGTTCCAAAAATAACACATTCAAATCTTTTTGAATTTTTATACTTTATCTT
ACTGACTTTCGATTGTAGCA

Downstream 100 bases:

>100_bases
AAGAATCTAAAAATCACAGGCAACATACAAATCACCAGTAACAGTGCAGATCCTTTATATAAATGATCTGCTTTTACGCC
CTTGACATCGCCAGATAATA

Product: integral membrane protein (DedA)

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 228; Mature: 228

Protein sequence:

>228_residues
MLGFEHAFVLLCLMELFDFILHVDEHLLEFVRNYGVWIYAILFLIIFVETGLVVMPFLPGDSLLFAAGALAASTGAMDPW
VLGVLLFIAAVLGDTLNYHIGRYIGPRVFETNSRFINKAHLTKTHQFFERHGGKTIIFARFIPFARTFAPFVAGAGSMNY
KFFLTYNAIGAFCWIASFITLGYLFGNMPVVKDNFTHLIFGIIILSVLPAIIGFIRQKLGSKVKDKRI

Sequences:

>Translated_228_residues
MLGFEHAFVLLCLMELFDFILHVDEHLLEFVRNYGVWIYAILFLIIFVETGLVVMPFLPGDSLLFAAGALAASTGAMDPW
VLGVLLFIAAVLGDTLNYHIGRYIGPRVFETNSRFINKAHLTKTHQFFERHGGKTIIFARFIPFARTFAPFVAGAGSMNY
KFFLTYNAIGAFCWIASFITLGYLFGNMPVVKDNFTHLIFGIIILSVLPAIIGFIRQKLGSKVKDKRI
>Mature_228_residues
MLGFEHAFVLLCLMELFDFILHVDEHLLEFVRNYGVWIYAILFLIIFVETGLVVMPFLPGDSLLFAAGALAASTGAMDPW
VLGVLLFIAAVLGDTLNYHIGRYIGPRVFETNSRFINKAHLTKTHQFFERHGGKTIIFARFIPFARTFAPFVAGAGSMNY
KFFLTYNAIGAFCWIASFITLGYLFGNMPVVKDNFTHLIFGIIILSVLPAIIGFIRQKLGSKVKDKRI

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=204, Percent_Identity=57.843137254902, Blast_Score=240, Evalue=5e-65,
Organism=Escherichia coli, GI1789481, Length=154, Percent_Identity=37.012987012987, Blast_Score=96, Evalue=2e-21,
Organism=Escherichia coli, GI1789384, Length=197, Percent_Identity=32.994923857868, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25640; Mature: 25640

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGFEHAFVLLCLMELFDFILHVDEHLLEFVRNYGVWIYAILFLIIFVETGLVVMPFLPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCC
DSLLFAAGALAASTGAMDPWVLGVLLFIAAVLGDTLNYHIGRYIGPRVFETNSRFINKAH
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
LTKTHQFFERHGGKTIIFARFIPFARTFAPFVAGAGSMNYKFFLTYNAIGAFCWIASFIT
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
LGYLFGNMPVVKDNFTHLIFGIIILSVLPAIIGFIRQKLGSKVKDKRI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC
>Mature Secondary Structure
MLGFEHAFVLLCLMELFDFILHVDEHLLEFVRNYGVWIYAILFLIIFVETGLVVMPFLPG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEECCCC
DSLLFAAGALAASTGAMDPWVLGVLLFIAAVLGDTLNYHIGRYIGPRVFETNSRFINKAH
CHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHH
LTKTHQFFERHGGKTIIFARFIPFARTFAPFVAGAGSMNYKFFLTYNAIGAFCWIASFIT
HHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHH
LGYLFGNMPVVKDNFTHLIFGIIILSVLPAIIGFIRQKLGSKVKDKRI
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]