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The map label for this gene is oruR [H]

Identifier: 50083413

GI number: 50083413

Start: 126867

End: 127841

Strand: Direct

Name: oruR [H]

Synonym: ACIAD0124

Alternate gene names: 50083413

Gene position: 126867-127841 (Clockwise)

Preceding gene: 50083412

Following gene: 50083417

Centisome position: 3.53

GC content: 29.64

Gene sequence:

>975_bases
CTGCAAATTCCTTCAAGTTGTAAAGTTTATTTTAATGATAATCATTATAATTGTCTTAATAATATCTACGATCGTGTCCC
ATTTAGCACTTGGCAAAAAATTATTTATGAAATTTATGAGCAATATCCTGTTTCTGATTTGAGTATAAAAATTGCAAGAC
ATGCAAATATTTCTTATGCAGGATTACCAGGCTATCTTATTCTTTCCAGAGAAAACTTATATCAGGCTGCCATGGATTTT
ATCTATTATGAGCGTTTGATTGTAGATTTTAATTCTGGAACCTTAAAGGTAAAGAATGGCCTCATTGAAGTAGGTTGGTC
TGATTTTCATGGTAAAGCAGGGCTACTGGTCGATGAAGTGATTATCTTCACCTATATTGAGATTGCAAAGCATATTATTT
ATCCTCAGGAATTAAAATTAGAAAAAATTTCATTTTATTATGATAAACCTGATAATACCGATTTTTATGAAAAAATATTA
GGGTGTCCTGTTTATTTCAATAGTCCAACTATTTCTGTTGTCATATCAGCAGCACATTTAGAAAGTATAAAGTTACCAAC
TAAAGATCCTATTTTATATGCCATCTTAAAACAAAAGGCGAACCGATTATTATTGGAGCTTCCTTCAAATCATGATTTTG
AACAAAGACTAGAAGTATGTATTATGCACTGCATTAAAGAGATTAGTTTAAATAATGTGGCAGATTATTTGAATATATCA
GTCCATGTATTAAAACAGAATTTATTGGAAAAAGACCTTAATTTTAGTGTATGTGTAAATAATGTAAGAAAAAAACTTGC
AGTTGCGTATCTTGAAAATGAACGATTAACTATCAGTCAAATATCAGAATTATTAGGATATTCTGAACAAAGTGCATTTC
AGCGGGCATTTAAAATCTGGATGAATATTACACCATTACAATATAGAAAAAACCTGAAGCAGGATGATTATCTTGATCTA
AAAGTTTTAGATTGA

Upstream 100 bases:

>100_bases
GAACTTAATCTTATAAATAAAGAATGAATTTTAAAATATGAAGACTTCTGTTACGGTTTTATTATTACTTATGATTGTAG
ATTTTTGTAAATCGAATAAT

Downstream 100 bases:

>100_bases
TTTATCATCTATTTAATTAATCAACAGTTGTTACATATGATAACAACTCTTTTTTGATTGATCCGAAAGGTCGAATAAGT
TACTTGTTACAAAGATCATT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MQIPSSCKVYFNDNHYNCLNNIYDRVPFSTWQKIIYEIYEQYPVSDLSIKIARHANISYAGLPGYLILSRENLYQAAMDF
IYYERLIVDFNSGTLKVKNGLIEVGWSDFHGKAGLLVDEVIIFTYIEIAKHIIYPQELKLEKISFYYDKPDNTDFYEKIL
GCPVYFNSPTISVVISAAHLESIKLPTKDPILYAILKQKANRLLLELPSNHDFEQRLEVCIMHCIKEISLNNVADYLNIS
VHVLKQNLLEKDLNFSVCVNNVRKKLAVAYLENERLTISQISELLGYSEQSAFQRAFKIWMNITPLQYRKNLKQDDYLDL
KVLD

Sequences:

>Translated_324_residues
MQIPSSCKVYFNDNHYNCLNNIYDRVPFSTWQKIIYEIYEQYPVSDLSIKIARHANISYAGLPGYLILSRENLYQAAMDF
IYYERLIVDFNSGTLKVKNGLIEVGWSDFHGKAGLLVDEVIIFTYIEIAKHIIYPQELKLEKISFYYDKPDNTDFYEKIL
GCPVYFNSPTISVVISAAHLESIKLPTKDPILYAILKQKANRLLLELPSNHDFEQRLEVCIMHCIKEISLNNVADYLNIS
VHVLKQNLLEKDLNFSVCVNNVRKKLAVAYLENERLTISQISELLGYSEQSAFQRAFKIWMNITPLQYRKNLKQDDYLDL
KVLD
>Mature_324_residues
MQIPSSCKVYFNDNHYNCLNNIYDRVPFSTWQKIIYEIYEQYPVSDLSIKIARHANISYAGLPGYLILSRENLYQAAMDF
IYYERLIVDFNSGTLKVKNGLIEVGWSDFHGKAGLLVDEVIIFTYIEIAKHIIYPQELKLEKISFYYDKPDNTDFYEKIL
GCPVYFNSPTISVVISAAHLESIKLPTKDPILYAILKQKANRLLLELPSNHDFEQRLEVCIMHCIKEISLNNVADYLNIS
VHVLKQNLLEKDLNFSVCVNNVRKKLAVAYLENERLTISQISELLGYSEQSAFQRAFKIWMNITPLQYRKNLKQDDYLDL
KVLD

Specific function: Probably activates the ArgJ gene that encodes ornithine acetyltransferase. Binds to its own promoter-operator region. Probably binds ornithine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37737; Mature: 37737

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIPSSCKVYFNDNHYNCLNNIYDRVPFSTWQKIIYEIYEQYPVSDLSIKIARHANISYA
CCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
GLPGYLILSRENLYQAAMDFIYYERLIVDFNSGTLKVKNGLIEVGWSDFHGKAGLLVDEV
CCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEECCEEEECCCCCCCCCCHHHHHH
IIFTYIEIAKHIIYPQELKLEKISFYYDKPDNTDFYEKILGCPVYFNSPTISVVISAAHL
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCEEEEEEEHHH
ESIKLPTKDPILYAILKQKANRLLLELPSNHDFEQRLEVCIMHCIKEISLNNVADYLNIS
HHCCCCCCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHVLKQNLLEKDLNFSVCVNNVRKKLAVAYLENERLTISQISELLGYSEQSAFQRAFKIW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHH
MNITPLQYRKNLKQDDYLDLKVLD
HCCCCHHHHHCCCCCCCEEEEEEC
>Mature Secondary Structure
MQIPSSCKVYFNDNHYNCLNNIYDRVPFSTWQKIIYEIYEQYPVSDLSIKIARHANISYA
CCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEEE
GLPGYLILSRENLYQAAMDFIYYERLIVDFNSGTLKVKNGLIEVGWSDFHGKAGLLVDEV
CCCCEEEEEHHHHHHHHHHHHHHHHHEEEECCCEEEEECCEEEECCCCCCCCCCHHHHHH
IIFTYIEIAKHIIYPQELKLEKISFYYDKPDNTDFYEKILGCPVYFNSPTISVVISAAHL
HHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCHHHHHHHCCCEEECCCCEEEEEEEHHH
ESIKLPTKDPILYAILKQKANRLLLELPSNHDFEQRLEVCIMHCIKEISLNNVADYLNIS
HHCCCCCCCHHHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VHVLKQNLLEKDLNFSVCVNNVRKKLAVAYLENERLTISQISELLGYSEQSAFQRAFKIW
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHCCCHHHHHHHHHHHH
MNITPLQYRKNLKQDDYLDLKVLD
HCCCCHHHHHCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9401045; 10984043 [H]