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The map label for this gene is 50083411

Identifier: 50083411

GI number: 50083411

Start: 124554

End: 125978

Strand: Direct

Name: 50083411

Synonym: ACIAD0122

Alternate gene names: NA

Gene position: 124554-125978 (Clockwise)

Preceding gene: 50083410

Following gene: 50083412

Centisome position: 3.46

GC content: 42.46

Gene sequence:

>1425_bases
ATGATACTTCATAATAAAAATTTTCAGTTAAATTTTAGATTTCTCGTGTTATGTATTTCCTTCTTATTGATCGTGCTGAT
CTCAGGTCAGAGTTGGGCAACTTGTCAGATAAATACAAGGCCTCAGTATCTGGAAACGGATGATGGAAGTGCTGCTAAAA
TAAGATTTGGTAATATACAACTGATGAATCAAGCAATCCAGCCACTGGGTAGTGTAATTGCCAGTACGATTGTTGCACCG
ACTGAATTTCGTGGACGCAATGCCAATTCGGAATCGATTTTATGGACGTGTGATGAAGGCGACCAGAATGATATTACCTT
TCTCGTTTCGACCAATGGAGATGATTATTACGGGGGTCGCACTGAGGTTTCAGCAACAGATGCAGGCGGGCAATCGGGGG
TATTTTATACCTATGCACAGTTGATCGGTTTAAGGCTGACCATGGGTGGAAAAGTCATTACTCCCTATTATCAGGATGTA
CCCGTAAATTATGAAACTGGAGCAGGTAGCAATGGTTGTGAAGTCGGAAAAATCTGTATTCGACTTAAACATATTCCAAA
CTTGCAGGCAGAGCTAATACGCATACAAACCAGCCCTGAAGGTGGCTCCAATCAGGTCAGACCACCTTTAGCTAGTGGAT
TATATAGTTATGCTGGGCCAGCAGCGTACATTCAACTGAGTAATAAAACCAATGGTATTGGGCCACAGCCTGTAGCTTTT
GGACATGATGAAATTGGAGAAAGTCACACAAACAAGTTTAATTTTTGGTGGGCTGATAATGGATTTGGTTATACCTTATT
CAATGCGATGTATATCAGTCCACCCACCAATTCATGTTTGACCACCTTTACCACACCTGTAGTCAATTTTCCTAAAACCA
ATATCCAGACATTAAATAATGGCGGGGAGGTTTCGGCAGATTTTGAGGTACAGGTGCAATGTCATAATAATGCTCAACGA
GGAACCTCAACGGGTCAAAATGCCATTGGTATACAGGTATCATCAACTACCTATGCAGCAGCTCAAACATTAGGATTAGT
CAATTCATCGACGGGCGTGAGTGCGCTGATCTCAGATCGTTATGATCAAGATACCAGTTTGGCACAAAATGTAGGAATTT
ATCTGGTCAATCCGTCAAACAATACCACTATGAATTTTGTGGGTCAGCCTGGTTTGACTGGTTCATTCCCTGCGACCTAT
GGAACGGGTTGTAGCGGATATTGTTATAGTGCAGTCACTTATCCAAGCGGAAATGCAGCTGGCTGGTATTCCCTGACACA
AAATGCTCAAGTTATTGGTTCGCCTGTAGAGAGTCATACCTTGTACCGGATTCCTTATCGTGCAGTCCTGAAAAAATTAC
CTAAAGGTACTGCCACAGCAGGTCGCGTTTATGCCACCGCAACCGTGATGGTTAAAATCCAATGA

Upstream 100 bases:

>100_bases
GGGTGCATCAAGCTGTTCGCTGCCTTATGCAATCAGTGACATCGAACTGAATCAGCCTTTGATTAAATTAAGTGCAGTGT
GTGAGATAGGGGCTAAATAA

Downstream 100 bases:

>100_bases
AGTTAGTTCTTTTTACTTTGATTATATGCTTGGGTTTATGGGGAGTCCCTGCAATTGCAGGCATACTTCCTGAAAATACG
CGTGTGATTTTTGATGGGAC

Product: fimbrial subunit, outer membrane protein

Products: NA

Alternate protein names: Adhesin MrkD; Fimbrial Subunit Outer Membrane Protein

Number of amino acids: Translated: 474; Mature: 474

Protein sequence:

>474_residues
MILHNKNFQLNFRFLVLCISFLLIVLISGQSWATCQINTRPQYLETDDGSAAKIRFGNIQLMNQAIQPLGSVIASTIVAP
TEFRGRNANSESILWTCDEGDQNDITFLVSTNGDDYYGGRTEVSATDAGGQSGVFYTYAQLIGLRLTMGGKVITPYYQDV
PVNYETGAGSNGCEVGKICIRLKHIPNLQAELIRIQTSPEGGSNQVRPPLASGLYSYAGPAAYIQLSNKTNGIGPQPVAF
GHDEIGESHTNKFNFWWADNGFGYTLFNAMYISPPTNSCLTTFTTPVVNFPKTNIQTLNNGGEVSADFEVQVQCHNNAQR
GTSTGQNAIGIQVSSTTYAAAQTLGLVNSSTGVSALISDRYDQDTSLAQNVGIYLVNPSNNTTMNFVGQPGLTGSFPATY
GTGCSGYCYSAVTYPSGNAAGWYSLTQNAQVIGSPVESHTLYRIPYRAVLKKLPKGTATAGRVYATATVMVKIQ

Sequences:

>Translated_474_residues
MILHNKNFQLNFRFLVLCISFLLIVLISGQSWATCQINTRPQYLETDDGSAAKIRFGNIQLMNQAIQPLGSVIASTIVAP
TEFRGRNANSESILWTCDEGDQNDITFLVSTNGDDYYGGRTEVSATDAGGQSGVFYTYAQLIGLRLTMGGKVITPYYQDV
PVNYETGAGSNGCEVGKICIRLKHIPNLQAELIRIQTSPEGGSNQVRPPLASGLYSYAGPAAYIQLSNKTNGIGPQPVAF
GHDEIGESHTNKFNFWWADNGFGYTLFNAMYISPPTNSCLTTFTTPVVNFPKTNIQTLNNGGEVSADFEVQVQCHNNAQR
GTSTGQNAIGIQVSSTTYAAAQTLGLVNSSTGVSALISDRYDQDTSLAQNVGIYLVNPSNNTTMNFVGQPGLTGSFPATY
GTGCSGYCYSAVTYPSGNAAGWYSLTQNAQVIGSPVESHTLYRIPYRAVLKKLPKGTATAGRVYATATVMVKIQ
>Mature_474_residues
MILHNKNFQLNFRFLVLCISFLLIVLISGQSWATCQINTRPQYLETDDGSAAKIRFGNIQLMNQAIQPLGSVIASTIVAP
TEFRGRNANSESILWTCDEGDQNDITFLVSTNGDDYYGGRTEVSATDAGGQSGVFYTYAQLIGLRLTMGGKVITPYYQDV
PVNYETGAGSNGCEVGKICIRLKHIPNLQAELIRIQTSPEGGSNQVRPPLASGLYSYAGPAAYIQLSNKTNGIGPQPVAF
GHDEIGESHTNKFNFWWADNGFGYTLFNAMYISPPTNSCLTTFTTPVVNFPKTNIQTLNNGGEVSADFEVQVQCHNNAQR
GTSTGQNAIGIQVSSTTYAAAQTLGLVNSSTGVSALISDRYDQDTSLAQNVGIYLVNPSNNTTMNFVGQPGLTGSFPATY
GTGCSGYCYSAVTYPSGNAAGWYSLTQNAQVIGSPVESHTLYRIPYRAVLKKLPKGTATAGRVYATATVMVKIQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50993; Mature: 50993

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS00261 GLYCO_HORMONE_BETA_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILHNKNFQLNFRFLVLCISFLLIVLISGQSWATCQINTRPQYLETDDGSAAKIRFGNIQ
CEEECCCCEEEHHHHHHHHHHHHHHEECCCCEEEEEECCCCCEEECCCCCEEEEEECCHH
LMNQAIQPLGSVIASTIVAPTEFRGRNANSESILWTCDEGDQNDITFLVSTNGDDYYGGR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCE
TEVSATDAGGQSGVFYTYAQLIGLRLTMGGKVITPYYQDVPVNYETGAGSNGCEVGKICI
EEEEECCCCCCCCHHHHHHHHHEEEEECCCEEECCCCCCCCCEEECCCCCCCCCCEEEEE
RLKHIPNLQAELIRIQTSPEGGSNQVRPPLASGLYSYAGPAAYIQLSNKTNGIGPQPVAF
EEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEC
GHDEIGESHTNKFNFWWADNGFGYTLFNAMYISPPTNSCLTTFTTPVVNFPKTNIQTLNN
CCHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEECC
GGEVSADFEVQVQCHNNAQRGTSTGQNAIGIQVSSTTYAAAQTLGLVNSSTGVSALISDR
CCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHEEECCCCCEEHHHCC
YDQDTSLAQNVGIYLVNPSNNTTMNFVGQPGLTGSFPATYGTGCSGYCYSAVTYPSGNAA
CCCCCHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
GWYSLTQNAQVIGSPVESHTLYRIPYRAVLKKLPKGTATAGRVYATATVMVKIQ
EEEEECCCCEEECCCCCCCEEEECCHHHHHHHCCCCCCCCCEEEEEEEEEEEEC
>Mature Secondary Structure
MILHNKNFQLNFRFLVLCISFLLIVLISGQSWATCQINTRPQYLETDDGSAAKIRFGNIQ
CEEECCCCEEEHHHHHHHHHHHHHHEECCCCEEEEEECCCCCEEECCCCCEEEEEECCHH
LMNQAIQPLGSVIASTIVAPTEFRGRNANSESILWTCDEGDQNDITFLVSTNGDDYYGGR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCCE
TEVSATDAGGQSGVFYTYAQLIGLRLTMGGKVITPYYQDVPVNYETGAGSNGCEVGKICI
EEEEECCCCCCCCHHHHHHHHHEEEEECCCEEECCCCCCCCCEEECCCCCCCCCCEEEEE
RLKHIPNLQAELIRIQTSPEGGSNQVRPPLASGLYSYAGPAAYIQLSNKTNGIGPQPVAF
EEECCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCEEC
GHDEIGESHTNKFNFWWADNGFGYTLFNAMYISPPTNSCLTTFTTPVVNFPKTNIQTLNN
CCHHCCCCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEECC
GGEVSADFEVQVQCHNNAQRGTSTGQNAIGIQVSSTTYAAAQTLGLVNSSTGVSALISDR
CCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEECCCHHHHHHHHHEEECCCCCEEHHHCC
YDQDTSLAQNVGIYLVNPSNNTTMNFVGQPGLTGSFPATYGTGCSGYCYSAVTYPSGNAA
CCCCCHHHHCCCEEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCC
GWYSLTQNAQVIGSPVESHTLYRIPYRAVLKKLPKGTATAGRVYATATVMVKIQ
EEEEECCCCEEECCCCCCCEEEECCHHHHHHHCCCCCCCCCEEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA