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The map label for this gene is dadA

Identifier: 50083404

GI number: 50083404

Start: 115660

End: 116919

Strand: Direct

Name: dadA

Synonym: ACIAD0115

Alternate gene names: 50083404

Gene position: 115660-116919 (Clockwise)

Preceding gene: 50083400

Following gene: 50083405

Centisome position: 3.21

GC content: 45.56

Gene sequence:

>1260_bases
ATGCGTGTCATTGTTTTAGGTAGTGGTGTGATTGGTGTAGCAAGCGCTTATTACCTTGCGCAACAAGGGGCACATGTCAC
TGTTCTTGATCGTCAAACAGGTCCAGCAGAAGAAACCAGTTTTGGTAATGCAGGACAAATTTCTCCTGGTTATTCGACGC
CTTGGGCAGCGCCTGGCATTCCATTTAAAGCGGTCAAATGGATGTTTCAGCATCATGCACCATTGGCCATTAATCTGGAT
GGCAGCATGTGGCAATTACAGTGGATGGCACAAATGCTGAAAAACTGTAATCCGCAAAGTTATAGCCAAAATAAAGAACG
CATGATGCGCGTTGCGGAATATAGTCGTGACTGTCTGAAATCTCTACGCGAGACTACGGGAATCAGTTATGAAAATCGCG
CTAAAGGTACACTACAGGTGTTTCGTAAAGAAGCACAGCTTGAAGCAGTACAGCGTGATATTGAAGTTCTACAAGAGTGT
GGTGTCAGTTATGAGCTGTTATATCAAGATGATCTGGCGCGTGTAGAACCAGCACTCGAACATGCCAAAGATAAACTGGT
CGGTGGTTTACATTTACCAAATGATGAAACAGGTGATTGCTACCTGTTTACCAATGCCTTGGCCCAGAAAGCCAAAGAAC
TGGGTGTAAATTTTCAGTTTAACCAGAATGTAGAAGGTCTGGTGGTTGAAGGTGACGAGATTAAAGGCGTTCGTGTGAAT
GGTCAGGTGTTAAAAGCAGATCGTTATGTATTGGCATTTGGCAGTTATTCACGTGATTTTCTCAAACCACTGGCGTTAAA
TTTACCTGTTTATCCAGTGAAAGGTTACTCGCTGACCATCCCAATTGTACAACCTGAGTTTGCACCACAGTCGACGGTAC
TGGATGAAACCTACAAGATTGCCATTACCCGTTTTGACCAGCGTATCCGTGTAGGGGGAATGGCTGAGCTCAGTGGTTTT
AATTTGGGTTTGAATCAGGATCGCCGTGCCACACTTGAAATGGTGACACAAGACCTTTTCCCTGGCGGTAATATGGCAGA
AGCTTCGTTCTGGACGGGCTTACGGCCTATGACACCAGACAGCACGCCAATTATCGGTGCGACCCGTTTTAAAAATCTAT
TTCTAAATACAGGACATGGCACCTTGGGCTGGACGATGGCCTGCGGCTCGGGCAAGTTGATCAGCGATATTGTATTGAGC
CATCAGACCGAGATTAGTACCGAAGGTCTTTCACTACAGCGTTATTCAACCGCTGCTTAA

Upstream 100 bases:

>100_bases
TTTAAGATTTAACTGGATTATAGCTTTAAAAATAGTGAAATAAACTATTGATGCGGAAATATACTAGTTAAATAAACTAG
TATGTGCCAGGGGATAGGGT

Downstream 100 bases:

>100_bases
GCTTTATTATTGAGTATCAAGGAAGACACTTATGCCACGTCCGATTCAGGCTGTTATTCATCTTGAAGCACTTGCGCACA
ATCTTAAGATTGTGCGTGCA

Product: D-amino acid dehydrogenase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MRVIVLGSGVIGVASAYYLAQQGAHVTVLDRQTGPAEETSFGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLD
GSMWQLQWMAQMLKNCNPQSYSQNKERMMRVAEYSRDCLKSLRETTGISYENRAKGTLQVFRKEAQLEAVQRDIEVLQEC
GVSYELLYQDDLARVEPALEHAKDKLVGGLHLPNDETGDCYLFTNALAQKAKELGVNFQFNQNVEGLVVEGDEIKGVRVN
GQVLKADRYVLAFGSYSRDFLKPLALNLPVYPVKGYSLTIPIVQPEFAPQSTVLDETYKIAITRFDQRIRVGGMAELSGF
NLGLNQDRRATLEMVTQDLFPGGNMAEASFWTGLRPMTPDSTPIIGATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLS
HQTEISTEGLSLQRYSTAA

Sequences:

>Translated_419_residues
MRVIVLGSGVIGVASAYYLAQQGAHVTVLDRQTGPAEETSFGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLD
GSMWQLQWMAQMLKNCNPQSYSQNKERMMRVAEYSRDCLKSLRETTGISYENRAKGTLQVFRKEAQLEAVQRDIEVLQEC
GVSYELLYQDDLARVEPALEHAKDKLVGGLHLPNDETGDCYLFTNALAQKAKELGVNFQFNQNVEGLVVEGDEIKGVRVN
GQVLKADRYVLAFGSYSRDFLKPLALNLPVYPVKGYSLTIPIVQPEFAPQSTVLDETYKIAITRFDQRIRVGGMAELSGF
NLGLNQDRRATLEMVTQDLFPGGNMAEASFWTGLRPMTPDSTPIIGATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLS
HQTEISTEGLSLQRYSTAA
>Mature_419_residues
MRVIVLGSGVIGVASAYYLAQQGAHVTVLDRQTGPAEETSFGNAGQISPGYSTPWAAPGIPFKAVKWMFQHHAPLAINLD
GSMWQLQWMAQMLKNCNPQSYSQNKERMMRVAEYSRDCLKSLRETTGISYENRAKGTLQVFRKEAQLEAVQRDIEVLQEC
GVSYELLYQDDLARVEPALEHAKDKLVGGLHLPNDETGDCYLFTNALAQKAKELGVNFQFNQNVEGLVVEGDEIKGVRVN
GQVLKADRYVLAFGSYSRDFLKPLALNLPVYPVKGYSLTIPIVQPEFAPQSTVLDETYKIAITRFDQRIRVGGMAELSGF
NLGLNQDRRATLEMVTQDLFPGGNMAEASFWTGLRPMTPDSTPIIGATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLS
HQTEISTEGLSLQRYSTAA

Specific function: Oxidative deamination of D-amino acids

COG id: NA

COG function: NA

Gene ontology:

Cell location: Inner Membrane-Bound [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DadA oxidoreductase family

Homologues:

Organism=Escherichia coli, GI1787438, Length=417, Percent_Identity=63.5491606714628, Blast_Score=552, Evalue=1e-158,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DADA_ACIAD (Q6FFR5)

Other databases:

- EMBL:   CR543861
- RefSeq:   YP_044914.1
- ProteinModelPortal:   Q6FFR5
- STRING:   Q6FFR5
- GeneID:   2878458
- GenomeReviews:   CR543861_GR
- KEGG:   aci:ACIAD0115
- NMPDR:   fig|62977.3.peg.89
- eggNOG:   COG0665
- HOGENOM:   HBG729204
- OMA:   PITDESQ
- PhylomeDB:   Q6FFR5
- ProtClustDB:   PRK00711
- BioCyc:   ASP62977:ACIAD0115-MONOMER
- HAMAP:   MF_01202
- InterPro:   IPR023080
- InterPro:   IPR006076

Pfam domain/function: PF01266 DAO

EC number: =1.4.99.1

Molecular weight: Translated: 46299; Mature: 46299

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVIVLGSGVIGVASAYYLAQQGAHVTVLDRQTGPAEETSFGNAGQISPGYSTPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYSQNKERMMRVAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
SLRETTGISYENRAKGTLQVFRKEAQLEAVQRDIEVLQECGVSYELLYQDDLARVEPALE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
HAKDKLVGGLHLPNDETGDCYLFTNALAQKAKELGVNFQFNQNVEGLVVEGDEIKGVRVN
HHHHHHHCCEECCCCCCCCEEEEHHHHHHHHHHHCCCEEECCCCCEEEEECCCEEEEEEC
GQVLKADRYVLAFGSYSRDFLKPLALNLPVYPVKGYSLTIPIVQPEFAPQSTVLDETYKI
CEEEECCEEEEEECCCCHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCHHHCCCEEE
AITRFDQRIRVGGMAELSGFNLGLNQDRRATLEMVTQDLFPGGNMAEASFWTGLRPMTPD
EEEECCCHHEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC
STPIIGATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLSHQTEISTEGLSLQRYSTAA
CCCEEEHHHHCEEEEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCCCCC
>Mature Secondary Structure
MRVIVLGSGVIGVASAYYLAQQGAHVTVLDRQTGPAEETSFGNAGQISPGYSTPWAAPGI
CEEEEEECCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PFKAVKWMFQHHAPLAINLDGSMWQLQWMAQMLKNCNPQSYSQNKERMMRVAEYSRDCLK
CHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
SLRETTGISYENRAKGTLQVFRKEAQLEAVQRDIEVLQECGVSYELLYQDDLARVEPALE
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHH
HAKDKLVGGLHLPNDETGDCYLFTNALAQKAKELGVNFQFNQNVEGLVVEGDEIKGVRVN
HHHHHHHCCEECCCCCCCCEEEEHHHHHHHHHHHCCCEEECCCCCEEEEECCCEEEEEEC
GQVLKADRYVLAFGSYSRDFLKPLALNLPVYPVKGYSLTIPIVQPEFAPQSTVLDETYKI
CEEEECCEEEEEECCCCHHHHHHHHHCCCEEEECCCEEEEEEECCCCCCCCHHHCCCEEE
AITRFDQRIRVGGMAELSGFNLGLNQDRRATLEMVTQDLFPGGNMAEASFWTGLRPMTPD
EEEECCCHHEECCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCCC
STPIIGATRFKNLFLNTGHGTLGWTMACGSGKLISDIVLSHQTEISTEGLSLQRYSTAA
CCCEEEHHHHCEEEEECCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA