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The map label for this gene is 50083340

Identifier: 50083340

GI number: 50083340

Start: 50137

End: 50811

Strand: Reverse

Name: 50083340

Synonym: ACIAD0046

Alternate gene names: NA

Gene position: 50811-50137 (Counterclockwise)

Preceding gene: 50083341

Following gene: 50083338

Centisome position: 1.41

GC content: 42.67

Gene sequence:

>675_bases
ATGCTCGCGTGTGATCAAACAGTGATAGGAAGACTCATGAATCCAGATCGCCATCAACAATTTCTAATCCGCAAAGAACG
CATCCTGAGTGTCGCTGAAAGGCTGTTACTGGAAAACAATCAGGAAATTACGCTAGATGAGCTTGTCGCAGAGCTCGACA
TTGCGAAAGGAACGCTCTATAAACATTTCAAGAGTAAAAATGAGCTGCTACTCGAACTGGTGATTCAGAATGAACGACGC
TTGCTGGAAATTTCACAGAAGCACCATCATGATTTCAAGGAATATGCACCGATTTATATGTTGCATCATTTACTGGCACC
TGCACGAACCATCTTGCTGCACCAGCTTGAAGAAAATTTGACCATGACCGAATCGAAGCTCAATCATCTGTTTGAAGCAC
TTTATGAAATTCGTCAGGAACGTATTCTGGCCATTAAGGACATTACCGAAGCCTATTTAAAATCGGTCAACTATGATATG
TCGATTCGTGACTATCTGTCTTACATCTGGTCACTGACCTATGGTGCTGCGCTGCTGCTGAACTCAAGTTATTATCAACG
TTCGATTGGCTCAAGACAAAAACTGATCAACCTATATGTCAATCAGGCACTGTCCTTGCCTGCGCAGTCGATCAATCTGG
ATGCCTTTGAAATCGATCTGAAAGATCTTTCGTAA

Upstream 100 bases:

>100_bases
GGGATAAGCTGGTTTTTTTGTTGAAGACCATGTGTTGTACATGATATAGAGTAAAGTGATATTAATTAAAGCAATAGACA
ATCTCGCCAAAAGCAAATGG

Downstream 100 bases:

>100_bases
CGCTCGCCTCTAAATCACAGTCAATAAAAAAGGTTTCTACATCATAGAAACCTTTTTTATGCATTCAGAAAAAATTCTGC
ATGGTTATTTCTTGGCAGTA

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Bacterial Regulatory Protein

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MLACDQTVIGRLMNPDRHQQFLIRKERILSVAERLLLENNQEITLDELVAELDIAKGTLYKHFKSKNELLLELVIQNERR
LLEISQKHHHDFKEYAPIYMLHHLLAPARTILLHQLEENLTMTESKLNHLFEALYEIRQERILAIKDITEAYLKSVNYDM
SIRDYLSYIWSLTYGAALLLNSSYYQRSIGSRQKLINLYVNQALSLPAQSINLDAFEIDLKDLS

Sequences:

>Translated_224_residues
MLACDQTVIGRLMNPDRHQQFLIRKERILSVAERLLLENNQEITLDELVAELDIAKGTLYKHFKSKNELLLELVIQNERR
LLEISQKHHHDFKEYAPIYMLHHLLAPARTILLHQLEENLTMTESKLNHLFEALYEIRQERILAIKDITEAYLKSVNYDM
SIRDYLSYIWSLTYGAALLLNSSYYQRSIGSRQKLINLYVNQALSLPAQSINLDAFEIDLKDLS
>Mature_224_residues
MLACDQTVIGRLMNPDRHQQFLIRKERILSVAERLLLENNQEITLDELVAELDIAKGTLYKHFKSKNELLLELVIQNERR
LLEISQKHHHDFKEYAPIYMLHHLLAPARTILLHQLEENLTMTESKLNHLFEALYEIRQERILAIKDITEAYLKSVNYDM
SIRDYLSYIWSLTYGAALLLNSSYYQRSIGSRQKLINLYVNQALSLPAQSINLDAFEIDLKDLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26269; Mature: 26269

Theoretical pI: Translated: 6.42; Mature: 6.42

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLACDQTVIGRLMNPDRHQQFLIRKERILSVAERLLLENNQEITLDELVAELDIAKGTLY
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KHFKSKNELLLELVIQNERRLLEISQKHHHDFKEYAPIYMLHHLLAPARTILLHQLEENL
HHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMTESKLNHLFEALYEIRQERILAIKDITEAYLKSVNYDMSIRDYLSYIWSLTYGAALLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NSSYYQRSIGSRQKLINLYVNQALSLPAQSINLDAFEIDLKDLS
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCC
>Mature Secondary Structure
MLACDQTVIGRLMNPDRHQQFLIRKERILSVAERLLLENNQEITLDELVAELDIAKGTLY
CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
KHFKSKNELLLELVIQNERRLLEISQKHHHDFKEYAPIYMLHHLLAPARTILLHQLEENL
HHHCCHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TMTESKLNHLFEALYEIRQERILAIKDITEAYLKSVNYDMSIRDYLSYIWSLTYGAALLL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH
NSSYYQRSIGSRQKLINLYVNQALSLPAQSINLDAFEIDLKDLS
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA