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The map label for this gene is yqfA [C]

Identifier: 49481225

GI number: 49481225

Start: 5199288

End: 5199935

Strand: Reverse

Name: yqfA [C]

Synonym: BT9727_5132

Alternate gene names: 49481225

Gene position: 5199935-5199288 (Counterclockwise)

Preceding gene: 49479008

Following gene: 49480462

Centisome position: 99.28

GC content: 34.1

Gene sequence:

>648_bases
ATGAATGCTTACATAAGAGAACCGGTTAATGCTTTTACCCATTTGGGAGGAGCTGTATTATCGTTTATTGCATTATTAGC
TATGCTTGTAAAAGTTTCTATTAAGATGCCATCTTTCGCGGCAATTACTGCTGTTATTTTGTTTGGTATTGGAATGATGG
TTCTGTATACAGCATCAGCTGTATATCATAGTGTTGTAGCTAGTGAACGTGTTATTTATTTCTTTAGGAAGCTTGATCAC
TCTATGATTTTTATATTGATTGCAGGTACATATGCACCATTTTGTTTAATTACATTACATTCCGCAAACGGTTTATTATT
ATTTTGTTTAGTTTACGCAACTGCCATTTGTGGCATTATTTTTAAAATGTTTTGGTTTAGTTGCCCAAGGTGGTTATCAA
CAGCAATTTATATTACGATGGGCTGGTTAATTGTTCTATTTTTTGCACCGTTAGCAGAGGGTTTAAGCACAGGGGGGCTC
ATATTCTTAGCACTCGGTGGTATTTTTTATACAATTGGTGGATTTATTTATGGTGCGAAGCCAAAATGGTTAGAGTTTAA
ATATATGGGACATCATGAAATTTTTCACGTTTTCGTGTTATTGGGAAGCCTAGCTCACTTTTTAAGTGTATATTGCTATG
TAATTTAA

Upstream 100 bases:

>100_bases
TACGAAACAAATGAATTGTAAATGTTGACCTCAAATATTAATAAGTATATAATTACATGTAGTTATCAAAACTACATGTA
ATTATATGAGGGGTGTTTAT

Downstream 100 bases:

>100_bases
CAATATAAAATTTCCGATTGATTTTTATTTTTCTTGATTAATAAAAAAAGATATAGACACATATGTATGTTGAAGAGTTG
CATAACGTAAAGGTTATGTG

Product: hemolysin III-like protein

Products: NA

Alternate protein names: Hemolysin III; Hly-III [H]

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MNAYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAVILFGIGMMVLYTASAVYHSVVASERVIYFFRKLDH
SMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIIFKMFWFSCPRWLSTAIYITMGWLIVLFFAPLAEGLSTGGL
IFLALGGIFYTIGGFIYGAKPKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI

Sequences:

>Translated_215_residues
MNAYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAVILFGIGMMVLYTASAVYHSVVASERVIYFFRKLDH
SMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIIFKMFWFSCPRWLSTAIYITMGWLIVLFFAPLAEGLSTGGL
IFLALGGIFYTIGGFIYGAKPKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI
>Mature_215_residues
MNAYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAVILFGIGMMVLYTASAVYHSVVASERVIYFFRKLDH
SMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGIIFKMFWFSCPRWLSTAIYITMGWLIVLFFAPLAEGLSTGGL
IFLALGGIFYTIGGFIYGAKPKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI

Specific function: Unknown

COG id: COG1272

COG function: function code R; Predicted membrane protein, hemolysin III homolog

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0073 (Hly-III) family [H]

Homologues:

Organism=Escherichia coli, GI1789266, Length=209, Percent_Identity=35.4066985645933, Blast_Score=113, Evalue=8e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004254
- InterPro:   IPR005744 [H]

Pfam domain/function: PF03006 HlyIII [H]

EC number: NA

Molecular weight: Translated: 23904; Mature: 23904

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: PS00024 HEMOPEXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAVILFGIGMMVLYTASA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VYHSVVASERVIYFFRKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGII
HHHHHHHHHHHHHHHHHHCHHHEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
FKMFWFSCPRWLSTAIYITMGWLIVLFFAPLAEGLSTGGLIFLALGGIFYTIGGFIYGAK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
PKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNAYIREPVNAFTHLGGAVLSFIALLAMLVKVSIKMPSFAAITAVILFGIGMMVLYTASA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VYHSVVASERVIYFFRKLDHSMIFILIAGTYAPFCLITLHSANGLLLFCLVYATAICGII
HHHHHHHHHHHHHHHHHHCHHHEEEEEHHCCCCEEEEEEECCCCHHHHHHHHHHHHHHHH
FKMFWFSCPRWLSTAIYITMGWLIVLFFAPLAEGLSTGGLIFLALGGIFYTIGGFIYGAK
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCC
PKWLEFKYMGHHEIFHVFVLLGSLAHFLSVYCYVI
CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7495855 [H]