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The map label for this gene is glpQ

Identifier: 49479482

GI number: 49479482

Start: 3335747

End: 3336691

Strand: Reverse

Name: glpQ

Synonym: BT9727_3270

Alternate gene names: 49479482

Gene position: 3336691-3335747 (Counterclockwise)

Preceding gene: 49478261

Following gene: 49478259

Centisome position: 63.71

GC content: 33.44

Gene sequence:

>945_bases
ATGAGAAAAATTATTAGCGTATTAGTTATTTTCTTTATGACGGGAAGTATTTTTGCTGGGGGAGCTGTTCATGCGAAAGC
AGAAGGAAAGCATGAGTGGAATAAGAATAAGTTTTTAAATATTGCACATCGCGGAGCAAGTGGACATGCACCTGAGCATA
CTTTTGCTTCTTATGATTTAGTGAAAAAAATGAAAGCGGATTATTTGGAGTTAGATATTCAATTAACTAAGGATGGCCAA
TTAATTGCAATGCATGATACAGCAGTTGATCGTACGACAAATGGAACAGGCGAAGTACGAGATAAAACGTTAAGCGAAAT
AAAGAGTTTAGATGCAGGATCGTGGTTCAATAAAGCGTATCCAGAAAAGGCTAAGCAAGAGTATGTTGGTCAAAAAGTTC
CGACTCTTGAAGAAATTTTCCAAAAGTACGGAAGAAGCATGAAGTATTACATTGAAACAAAATCACCAGATGTGTATCCA
GGAATGGAAGAGAAATTATTAGCTTTATTAGAAAAATATAATTTAATAGGTCAAAACATGTCTTCTAGCCGTGTGATGAT
TCAATCATTTAGTAAAGATAGTTTGAAAAAGATTCATAGTATGAATAAAAATATTCCGTTAGTTCAATTGCTTTGGTATT
ATCCAAATGAAAACAATGAGATTGTTGAATGGTCTGGCATTACACATGAGCCGAAACGTGTAACGAATGATGATTTTCAA
GAAATTAAAAAGTATGCAGTCGGTATTGGACCAAACTTACGTAATGATAACGGAGATTTAATTATCAATGAGTCATATAT
GAAAATGGCTAGGCAAAATGGTCTGTTAATTCATCCTTATACAATTAATGAGAAACCAGATATGAGATTGTTAATGAAAT
GGGGTGCTACAGGAATGTTTACAAATTATCCGGATCGATTACATAGTGTGTTAAAAGAAAAATAA

Upstream 100 bases:

>100_bases
AATTTTAATATAAGCTTATAAAAATAATGAAAGTATATCTTCTATTTCGTGTAAATCTCATTAACTTGTTGAAATTTACA
ACGTAGGAAGGGTTAAAAGG

Downstream 100 bases:

>100_bases
ATAGGAGAAAAGGTATACCGACGTTTTGGTATACCTTTTTCTATTATGCTAGATTATAGTAGTAGGATACATATTCTTCT
AAGCCTTGAACCTCTTTTTC

Product: glycerophosphoryl diester phosphodiesterase

Products: NA

Alternate protein names: Glycerophosphodiester phosphodiesterase [H]

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNKNKFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTKDGQ
LIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAYPEKAKQEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYP
GMEEKLLALLEKYNLIGQNMSSSRVMIQSFSKDSLKKIHSMNKNIPLVQLLWYYPNENNEIVEWSGITHEPKRVTNDDFQ
EIKKYAVGIGPNLRNDNGDLIINESYMKMARQNGLLIHPYTINEKPDMRLLMKWGATGMFTNYPDRLHSVLKEK

Sequences:

>Translated_314_residues
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNKNKFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTKDGQ
LIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAYPEKAKQEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYP
GMEEKLLALLEKYNLIGQNMSSSRVMIQSFSKDSLKKIHSMNKNIPLVQLLWYYPNENNEIVEWSGITHEPKRVTNDDFQ
EIKKYAVGIGPNLRNDNGDLIINESYMKMARQNGLLIHPYTINEKPDMRLLMKWGATGMFTNYPDRLHSVLKEK
>Mature_314_residues
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNKNKFLNIAHRGASGHAPEHTFASYDLVKKMKADYLELDIQLTKDGQ
LIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAYPEKAKQEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYP
GMEEKLLALLEKYNLIGQNMSSSRVMIQSFSKDSLKKIHSMNKNIPLVQLLWYYPNENNEIVEWSGITHEPKRVTNDDFQ
EIKKYAVGIGPNLRNDNGDLIINESYMKMARQNGLLIHPYTINEKPDMRLLMKWGATGMFTNYPDRLHSVLKEK

Specific function: Glycerophosphoryl diester phosphodiesterase hydrolyzes deacylated phospholipids to G3P and the corresponding alcohols [H]

COG id: COG0584

COG function: function code C; Glycerophosphoryl diester phosphodiesterase

Gene ontology:

Cell location: Periplasmic Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycerophosphoryl diester phosphodiesterase family [H]

Homologues:

Organism=Homo sapiens, GI7706617, Length=104, Percent_Identity=40.3846153846154, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1788572, Length=366, Percent_Identity=27.3224043715847, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1789858, Length=266, Percent_Identity=25.187969924812, Blast_Score=86, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17542344, Length=280, Percent_Identity=25.3571428571429, Blast_Score=85, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004129
- InterPro:   IPR017946 [H]

Pfam domain/function: PF03009 GDPD [H]

EC number: =3.1.4.46 [H]

Molecular weight: Translated: 35988; Mature: 35988

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNKNKFLNIAHRGASGHAPEHTFASYDL
CHHHHHHHHHHHHHCCHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
VKKMKADYLELDIQLTKDGQLIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAY
HHHHHCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCC
PEKAKQEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYPGMEEKLLALLEKYNLIGQNM
CHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
SSSRVMIQSFSKDSLKKIHSMNKNIPLVQLLWYYPNENNEIVEWSGITHEPKRVTNDDFQ
CCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHH
EIKKYAVGIGPNLRNDNGDLIINESYMKMARQNGLLIHPYTINEKPDMRLLMKWGATGMF
HHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCEEEEEEECCCCCCHHHHEECCCCCCC
TNYPDRLHSVLKEK
CCCHHHHHHHHHCC
>Mature Secondary Structure
MRKIISVLVIFFMTGSIFAGGAVHAKAEGKHEWNKNKFLNIAHRGASGHAPEHTFASYDL
CHHHHHHHHHHHHHCCHHCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHH
VKKMKADYLELDIQLTKDGQLIAMHDTAVDRTTNGTGEVRDKTLSEIKSLDAGSWFNKAY
HHHHHCCEEEEEEEECCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHCC
PEKAKQEYVGQKVPTLEEIFQKYGRSMKYYIETKSPDVYPGMEEKLLALLEKYNLIGQNM
CHHHHHHHHCCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCC
SSSRVMIQSFSKDSLKKIHSMNKNIPLVQLLWYYPNENNEIVEWSGITHEPKRVTNDDFQ
CCCCHHHHHCCHHHHHHHHHCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCHHHH
EIKKYAVGIGPNLRNDNGDLIINESYMKMARQNGLLIHPYTINEKPDMRLLMKWGATGMF
HHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHCCEEEEEEECCCCCCHHHHEECCCCCCC
TNYPDRLHSVLKEK
CCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8012593; 9384377 [H]