Click here to switch to the map view.

The map label for this gene is ymaE [H]

Identifier: 49478998

GI number: 49478998

Start: 3261895

End: 3262719

Strand: Reverse

Name: ymaE [H]

Synonym: BT9727_3190

Alternate gene names: 49478998

Gene position: 3262719-3261895 (Counterclockwise)

Preceding gene: 49478217

Following gene: 49478216

Centisome position: 62.29

GC content: 38.18

Gene sequence:

>825_bases
ATGAAAAATTTCGTTTGTACAACGTGTGGCGTGCAGTATGCAGCGAGTGTAGAAGAACCAGTGAGTTGTCATATTTGTGA
TGAAGAGAGACAATATGTGAATCCGAAAGGGCAGTCTTGGACGACGCTAGAAAGCTTACAAACAAGTGATACATATAAAA
ATGAAATAATCGAAGAGGAAAATGGGCTTTTTAGTATTACAACAAAACCAGGATTTGCGATCGGTCAAACGGCATATGTA
GTGAAAACAGATTCATATCGTTTACTGTGGGACTGTATTACTTATTTAGATGAAACGACAATTGCGAAAATAAAAGAGCT
TGGTGGATTAGATGCGATTGCATTATCTCACCCGCATTATTATTCAACGCAAGTAGAATGGGCGGAGACATTTGATGTAC
CAATTTATATACACGAAGATGATAAAGAGTGGGTGATGCGTCCGAGTAGTCGTATTATTTATTGGTCTGGTGAGTCTTTA
CAATTAGCGGATGGGATTACTATACATCGTCTTGGAGGACATTTTAGTGGCGGTTCTGTATTGCATTGGGAAGAAGGTAA
TGACGGAAAAGGGATTTTGTTAACAGGTGATATTATTCAAGTTGTAGCGGATGAACGATGGGTAAGCTTTATGTACAGCT
ATCCAAACTTAATTCCATTACCAGCGAGAAAAGTGGAAGAAATGGTGAATCGAGTGAAGCCGTTACAGTTTAATCGTTTA
TACAACGCTTTTCATCGAGTAGTAAAAGAAAATGCAAATGAGGCAGTTGAACGTTCTGCTGAAAGATATATTAAGGCGGT
AGAAGGAAAGTTGTTTTATACGTAA

Upstream 100 bases:

>100_bases
TATTTACTTACTTTTATCAGTTTATTAATTGAAAATAAAAAAGCAGATCATTATCAACAAAAATCAGCTTAATAAAAATA
GAGGGATAGGGGAAATTATG

Downstream 100 bases:

>100_bases
AAAGTAATTTGATAAGCGGCAATGCACTGTATGATTTGCTGTTTTTATAACACTGAAATGTCATTATTTGTCGGTAAGTC
GATATTCTTTGTCGAAACGT

Product: metallo-beta-lactamase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSDTYKNEIIEEENGLFSITTKPGFAIGQTAYV
VKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHYYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESL
QLADGITIHRLGGHFSGGSVLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNRL
YNAFHRVVKENANEAVERSAERYIKAVEGKLFYT

Sequences:

>Translated_274_residues
MKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSDTYKNEIIEEENGLFSITTKPGFAIGQTAYV
VKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHYYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESL
QLADGITIHRLGGHFSGGSVLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNRL
YNAFHRVVKENANEAVERSAERYIKAVEGKLFYT
>Mature_274_residues
MKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSDTYKNEIIEEENGLFSITTKPGFAIGQTAYV
VKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHYYSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESL
QLADGITIHRLGGHFSGGSVLHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNRL
YNAFHRVVKENANEAVERSAERYIKAVEGKLFYT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31293; Mature: 31293

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSDTYKNEIIEEE
CCCEEEECCCCHHHCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHCC
NGLFSITTKPGFAIGQTAYVVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHY
CCEEEEECCCCCEECCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCE
YSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESLQLADGITIHRLGGHFSGGSV
ECCEEEEHEECCEEEEEECCCHHHHCCCCCEEEEECCCEEEEECCEEEEECCCCCCCCCE
LHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNRL
EEECCCCCCCEEEEECHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH
YNAFHRVVKENANEAVERSAERYIKAVEGKLFYT
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEECC
>Mature Secondary Structure
MKNFVCTTCGVQYAASVEEPVSCHICDEERQYVNPKGQSWTTLESLQTSDTYKNEIIEEE
CCCEEEECCCCHHHCCCCCCCEEEEECCHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHCC
NGLFSITTKPGFAIGQTAYVVKTDSYRLLWDCITYLDETTIAKIKELGGLDAIALSHPHY
CCEEEEECCCCCEECCEEEEEEECCCHHHHHHHHHHCCHHHHHHHHHCCCEEEEECCCCE
YSTQVEWAETFDVPIYIHEDDKEWVMRPSSRIIYWSGESLQLADGITIHRLGGHFSGGSV
ECCEEEEHEECCEEEEEECCCHHHHCCCCCEEEEECCCEEEEECCEEEEECCCCCCCCCE
LHWEEGNDGKGILLTGDIIQVVADERWVSFMYSYPNLIPLPARKVEEMVNRVKPLQFNRL
EEECCCCCCCEEEEECHHHEEHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH
YNAFHRVVKENANEAVERSAERYIKAVEGKLFYT
HHHHHHHHHHCHHHHHHHHHHHHHHHHCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]