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The map label for this gene is plcR

Identifier: 49478976

GI number: 49478976

Start: 5087115

End: 5087972

Strand: Reverse

Name: plcR

Synonym: BT9727_5033

Alternate gene names: NA

Gene position: 5087972-5087115 (Counterclockwise)

Preceding gene: 49480425

Following gene: 49481801

Centisome position: 97.14

GC content: 31.47

Gene sequence:

>858_bases
ATGCACGCAGAAAAATTAGGAAGTGAAATTAAGAAAATTAGGGTGATGAGAGGATTAACACAAAAACAGTTATCCGAGAA
TATATGTCACCAATCGGAAGTGAGCCGAATTGAATCGGGCGCGGTATACCCAAGTATGGACATATTACAAGGTATTGCAG
CAAAGTTACAAGTTCCCATTATCCATTTTTATGAGGTACTTATCTATTCTGACATTGAAAGGAATAAGCAGCTAAAAGAT
CGAATTATTACGCTTTGTAAGCAAAAGAAATATAAAGAAATTTATAATAAAGTATGGAATGAGTTGAAAAAGGAAGAATA
TCATCCTGAGCTTCAGCAGTTTCTTCAATGGCAATATCATGTGGCTGCTTACGTATTGAAAAAAATTGATTACGAATATT
GTATTTTAGAATTAAAGAAATTGCTCAATCAACAATTGGTAGGGATAGATGTATATCAGAACCTGTATATTGAAAACGCA
ATTGCAAACATTTACGCTGAAAATGGCCATTTTAAGAAGAGTATTGAGTTATATGAAAATATATTAAAGCAATTAGAAGT
ATTACATGATAATAAAGAGTTTGATGTGAAGGTGAGACATAATTATGCAAAGGCATTATACTTAGACAATCAATACGAAG
AAGCACTTTGTCACGCAAATAAAGCTATTGAACTATCGTGTCAAATTAATAGTATGACATTGATTGGACAGTTATACTAT
CGAAAAGTTGAATGCCTAGAAAAGCTAGAGTGTGATAGAGCAGAAATTGAAGATGCTTACGAAAAAGCTTACTTCTTTTT
CGATATATTAGGAAACCATACATTAAAAGAATCAATTATAAAAAGGATGAAGAAATAA

Upstream 100 bases:

>100_bases
TATTATGCATTATTTCATATCAAAAATTGTCGAATTCACTTTATTGTAGTGGTATGACAACTTGAAAAATTAGATTGTTA
TAGTGGGATGGTGAGTAAGT

Downstream 100 bases:

>100_bases
AAAAGATTTAAAAAGTAAATATGCATAATTGCATAAGATGTGGATAAATTTTCATGATATATTTAAAGAAAAAATGTGGG
TGATGGAATATGAAAAAACT

Product: transcription activator

Products: NA

Alternate protein names: XRE Family Transcriptional Regulator; Transcriptional Regulator XRE Family; Transcriptional Regulator PlcR; Helix-Turn-Helix Domain-Containing Protein; Transcriptional Activator PlcR; Xre Family Transcriptional Regulator; Transcriptional Activator; Site-Specific Tyrosine Recombinase XerS; Transcriptional Regulator PlcR Family; Transcriptional Regulator XRE; Transcriptional Regulator PlcR-Like

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPIIHFYEVLIYSDIERNKQLKD
RIITLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYHVAAYVLKKIDYEYCILELKKLLNQQLVGIDVYQNLYIENA
IANIYAENGHFKKSIELYENILKQLEVLHDNKEFDVKVRHNYAKALYLDNQYEEALCHANKAIELSCQINSMTLIGQLYY
RKVECLEKLECDRAEIEDAYEKAYFFFDILGNHTLKESIIKRMKK

Sequences:

>Translated_285_residues
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPIIHFYEVLIYSDIERNKQLKD
RIITLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYHVAAYVLKKIDYEYCILELKKLLNQQLVGIDVYQNLYIENA
IANIYAENGHFKKSIELYENILKQLEVLHDNKEFDVKVRHNYAKALYLDNQYEEALCHANKAIELSCQINSMTLIGQLYY
RKVECLEKLECDRAEIEDAYEKAYFFFDILGNHTLKESIIKRMKK
>Mature_285_residues
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPIIHFYEVLIYSDIERNKQLKD
RIITLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYHVAAYVLKKIDYEYCILELKKLLNQQLVGIDVYQNLYIENA
IANIYAENGHFKKSIELYENILKQLEVLHDNKEFDVKVRHNYAKALYLDNQYEEALCHANKAIELSCQINSMTLIGQLYY
RKVECLEKLECDRAEIEDAYEKAYFFFDILGNHTLKESIIKRMKK

Specific function: Unknown

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33872; Mature: 33872

Theoretical pI: Translated: 7.54; Mature: 7.54

Prosite motif: PS50943 HTH_CROC1 ; PS00636 DNAJ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
IHFYEVLIYSDIERNKQLKDRIITLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VAAYVLKKIDYEYCILELKKLLNQQLVGIDVYQNLYIENAIANIYAENGHFKKSIELYEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILKQLEVLHDNKEFDVKVRHNYAKALYLDNQYEEALCHANKAIELSCQINSMTLIGQLYY
HHHHHHHHHCCCCEEEEEECCHHHHHEECCHHHHHHHHCCCEEEEEEEECHHHHHHHHHH
RKVECLEKLECDRAEIEDAYEKAYFFFDILGNHTLKESIIKRMKK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC
>Mature Secondary Structure
MHAEKLGSEIKKIRVMRGLTQKQLSENICHQSEVSRIESGAVYPSMDILQGIAAKLQVPI
CCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHH
IHFYEVLIYSDIERNKQLKDRIITLCKQKKYKEIYNKVWNELKKEEYHPELQQFLQWQYH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
VAAYVLKKIDYEYCILELKKLLNQQLVGIDVYQNLYIENAIANIYAENGHFKKSIELYEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
ILKQLEVLHDNKEFDVKVRHNYAKALYLDNQYEEALCHANKAIELSCQINSMTLIGQLYY
HHHHHHHHHCCCCEEEEEECCHHHHHEECCHHHHHHHHCCCEEEEEEEECHHHHHHHHHH
RKVECLEKLECDRAEIEDAYEKAYFFFDILGNHTLKESIIKRMKK
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA