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The map label for this gene is smf

Identifier: 49478404

GI number: 49478404

Start: 3672199

End: 3673068

Strand: Reverse

Name: smf

Synonym: BT9727_3575

Alternate gene names: 49478404

Gene position: 3673068-3672199 (Counterclockwise)

Preceding gene: 49479151

Following gene: 49478403

Centisome position: 70.13

GC content: 32.64

Gene sequence:

>870_bases
ATGAAAAGAGAACGATTGTTACATCTTCATTATTTGTTAGCAGACCATTGGAAGGCGATAGAAAGGCTATTACATGTCGA
TCCAGAATTGAAGGGAATATACACTTTTAATGCAAAACAAATGGAATGTTACACTGGAATATCCTCGAAAAAATCTTCAG
AATTAGTAAATTTTCTTCAAAGTTCAAATCTCCCGCAATATATATCTTATTTAGAGAAAAATCGAATCTTTTATATGACA
ATATGGGATAAAGATTATCCAAAATTATTAGGTGAAATACAAGATCCTCCCTTTGTATTATATGGAAAAGGAGAGAAGGA
TTTTCTCAATAAAGCGAATAAATTAGCAGTTGTTGGAACGAGAGAACCAACTTTATATGGACATGAGAGTTTAAAATTTA
TTTTACATCCATTATTAGAAAAGGAATGGCTTATTGTCAGTGGATTTGCAAGAGGGATAGATACGATGTCTCATGAAATT
ACAGTAAGACGGCATTGCCCAACAATTGCGATACTAGGACATGGATTATCGTATATATATCCAAAAGAGAATCGATATTT
ATATGAAGCGTGGAATGAATATATATTGTTATTAACAGAATATCCTCCGCACTATGCACCAAAAAAATGGTATTTTCCAA
AAAGGAATCGAATTATTAGTGGTATAAGTAAAGGTGTTTTAGTTGTAGAAGCGAAATCGAGAAGTGGGACACTTATTACT
GCAGACCTTGCTCTAGAGCAAAATAGAGAGGTATTTGCACTTCCTGGACCTATATTTACAGATAGTGCATCAGGAACAAA
TCATCTTATTCAACAAGGAGCGAAACTAGTAAGAAATGCAGAAGATATACTAGAAGAGATTTTAAATTAA

Upstream 100 bases:

>100_bases
TAAAAACTACTAATCTGTTGAAAGACACCTTCTTGCTTGAAGGTGTCTTTTTACAAACTTCTTGTTTACATAATGAAAAT
TATGGGTAAGGAGAATTGAG

Downstream 100 bases:

>100_bases
TCTTATATTTTTATGTTTTTATTAAACAATTATTGACAAATGGTAGATAGGCACTGTATGGTATATTCATTCTTGATTGA
CAAAAACAAGAGAAATCAAT

Product: SMF family nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLEKNRIFYMT
IWDKDYPKLLGEIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRHCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLVRNAEDILEEILN

Sequences:

>Translated_289_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLEKNRIFYMT
IWDKDYPKLLGEIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRHCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLVRNAEDILEEILN
>Mature_289_residues
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQSSNLPQYISYLEKNRIFYMT
IWDKDYPKLLGEIQDPPFVLYGKGEKDFLNKANKLAVVGTREPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEI
TVRRHCPTIAILGHGLSYIYPKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLVRNAEDILEEILN

Specific function: Unknown

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=244, Percent_Identity=39.7540983606557, Blast_Score=158, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 33393; Mature: 33393

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHH
SSNLPQYISYLEKNRIFYMTIWDKDYPKLLGEIQDPPFVLYGKGEKDFLNKANKLAVVGT
HCCCHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCCEEEEECCCHHHHCCCCCEEEEEC
REPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEITVRRHCPTIAILGHGLSYIY
CCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHEEEEECCCCEEEEEECCCEEEE
PKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEE
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLVRNAEDILEEILN
EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC
>Mature Secondary Structure
MKRERLLHLHYLLADHWKAIERLLHVDPELKGIYTFNAKQMECYTGISSKKSSELVNFLQ
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEECCCCCCHHHHHHHHHH
SSNLPQYISYLEKNRIFYMTIWDKDYPKLLGEIQDPPFVLYGKGEKDFLNKANKLAVVGT
HCCCHHHHHHHHHCCEEEEEEECCCHHHHHHCCCCCCEEEEECCCHHHHCCCCCEEEEEC
REPTLYGHESLKFILHPLLEKEWLIVSGFARGIDTMSHEITVRRHCPTIAILGHGLSYIY
CCCCEECHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHHEEEEECCCCEEEEEECCCEEEE
PKENRYLYEAWNEYILLLTEYPPHYAPKKWYFPKRNRIISGISKGVLVVEAKSRSGTLIT
ECCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHHCCCCCEEEEEECCCCCCEEE
ADLALEQNREVFALPGPIFTDSASGTNHLIQQGAKLVRNAEDILEEILN
EEEEECCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]