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The map label for this gene is rapE

Identifier: 49478262

GI number: 49478262

Start: 3342605

End: 3343702

Strand: Reverse

Name: rapE

Synonym: BT9727_3275

Alternate gene names: 49478262

Gene position: 3343702-3342605 (Counterclockwise)

Preceding gene: 49479483

Following gene: 49478261

Centisome position: 63.84

GC content: 27.32

Gene sequence:

>1098_bases
TTGATGAATATACAAATCACTGGCAATGAATTAATTACTAAGATGCTGAATGATTGGTATCGAGATATTAGAGCTCAACG
TATAAGTGAAGCAAAAAAATTAAAAGAAGAGATCGATAAAAAGCTTTATATTATCGAATCAGATGTAAATGTTTCATTTC
ACTATTATCTGTTAGAATTTCGATATAAAGTGCTAATAGATGGTTTAGGTAATTTGAAAAAAGCTTTTGATAAAATAGAT
GCATTGCCTAAACCAAATGATGAATATTCTAATTATTATTATTATTTATTCAAAGCCATTCATTATACAATTCTTACTAA
TTATAGTGAAGCTAGCAACTATTTTGAAAAAGCTGAAGGGTTATTAGAGCATATTTCAGATGAAATTGAATATGCAGAGT
TTAATTATAGAGTTGCTATATTAAAATACCACTTGCATTACGCATATTCAGCTATTGAATACGCTTCAAAAGCAAGAGAT
ATCTTTGTTAAACAAGCTGGGTATGAAGTGAACATAGCGTTGTGCGAAAATATATTAGGATTATCTTTTTCGGAATTAAA
GCAGCATGATAAAGGTGAGGAATATATTGCGTCAGCAATAAACATTTTACAAAAAAATGATGCTGAAATGTTAATATTAA
GAATCAGACATAATTTAGGTTTATTGTATGCGAGTCAAAATCTTTCAGTTTTAGCAATTAGACATTTATCTGAGGTTTCT
AAAAAAATGCCTACTCATTATAAGGCAATCTTTTTAGAGGCAAGAGAATATTATAAATTAGGTGAAATAGAAAAAGCGAA
GGAATTAATTGAAAGTGGATTGAAGGTTTGTAAGGAATTAAAAAATGATGAATATAGATATCACTTTTTAATTCTAGAGG
GATTTTGTCAGCATTTAGAGGTAGAAAAAATAGAAAAAATTATTCTCGAAGGTTTTTCTTACTTTGAAAGAAAAAATTTA
TCGGAGTATATTCACGAATATACTGAAAGTCTGGCATTAGAGTTTCATAAAGTAGGTAATATAGAAAAAGCAGAAAAGTA
TTTTTTTATGAGTTATGAAATAAAAAAGAGAATATTTGAAAAAGAAGCATTGAAATAA

Upstream 100 bases:

>100_bases
GTGAATGAATTTCGTTCAATTGTTGAGAAATATATATATAGATAGATATAAATAAGTAAATTATGTTATTTTTATGATAA
TTAAAAGAAGGAGAGTGGAT

Downstream 100 bases:

>100_bases
AGAAAAAACTTGGATTATCTATAATGGGTATAGCAGCTGGAGTTATGGGGTTTTATGATAGAAAACCTTTGTAATAAATT
AGCTCAAAGTGGATACGGTG

Product: response regulator aspartate phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MMNIQITGNELITKMLNDWYRDIRAQRISEAKKLKEEIDKKLYIIESDVNVSFHYYLLEFRYKVLIDGLGNLKKAFDKID
ALPKPNDEYSNYYYYLFKAIHYTILTNYSEASNYFEKAEGLLEHISDEIEYAEFNYRVAILKYHLHYAYSAIEYASKARD
IFVKQAGYEVNIALCENILGLSFSELKQHDKGEEYIASAINILQKNDAEMLILRIRHNLGLLYASQNLSVLAIRHLSEVS
KKMPTHYKAIFLEAREYYKLGEIEKAKELIESGLKVCKELKNDEYRYHFLILEGFCQHLEVEKIEKIILEGFSYFERKNL
SEYIHEYTESLALEFHKVGNIEKAEKYFFMSYEIKKRIFEKEALK

Sequences:

>Translated_365_residues
MMNIQITGNELITKMLNDWYRDIRAQRISEAKKLKEEIDKKLYIIESDVNVSFHYYLLEFRYKVLIDGLGNLKKAFDKID
ALPKPNDEYSNYYYYLFKAIHYTILTNYSEASNYFEKAEGLLEHISDEIEYAEFNYRVAILKYHLHYAYSAIEYASKARD
IFVKQAGYEVNIALCENILGLSFSELKQHDKGEEYIASAINILQKNDAEMLILRIRHNLGLLYASQNLSVLAIRHLSEVS
KKMPTHYKAIFLEAREYYKLGEIEKAKELIESGLKVCKELKNDEYRYHFLILEGFCQHLEVEKIEKIILEGFSYFERKNL
SEYIHEYTESLALEFHKVGNIEKAEKYFFMSYEIKKRIFEKEALK
>Mature_365_residues
MMNIQITGNELITKMLNDWYRDIRAQRISEAKKLKEEIDKKLYIIESDVNVSFHYYLLEFRYKVLIDGLGNLKKAFDKID
ALPKPNDEYSNYYYYLFKAIHYTILTNYSEASNYFEKAEGLLEHISDEIEYAEFNYRVAILKYHLHYAYSAIEYASKARD
IFVKQAGYEVNIALCENILGLSFSELKQHDKGEEYIASAINILQKNDAEMLILRIRHNLGLLYASQNLSVLAIRHLSEVS
KKMPTHYKAIFLEAREYYKLGEIEKAKELIESGLKVCKELKNDEYRYHFLILEGFCQHLEVEKIEKIILEGFSYFERKNL
SEYIHEYTESLALEFHKVGNIEKAEKYFFMSYEIKKRIFEKEALK

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001440
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: PF00515 TPR_1 [H]

EC number: NA

Molecular weight: Translated: 43313; Mature: 43313

Theoretical pI: Translated: 6.46; Mature: 6.46

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNIQITGNELITKMLNDWYRDIRAQRISEAKKLKEEIDKKLYIIESDVNVSFHYYLLEF
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHH
RYKVLIDGLGNLKKAFDKIDALPKPNDEYSNYYYYLFKAIHYTILTNYSEASNYFEKAEG
HHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLEHISDEIEYAEFNYRVAILKYHLHYAYSAIEYASKARDIFVKQAGYEVNIALCENILG
HHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHC
LSFSELKQHDKGEEYIASAINILQKNDAEMLILRIRHNLGLLYASQNLSVLAIRHLSEVS
CCHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEHHCCEEEEECCCCHHHHHHHHHHHH
KKMPTHYKAIFLEAREYYKLGEIEKAKELIESGLKVCKELKNDEYRYHFLILEGFCQHLE
HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCC
VEKIEKIILEGFSYFERKNLSEYIHEYTESLALEFHKVGNIEKAEKYFFMSYEIKKRIFE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEHHHHHHHHHHH
KEALK
HHCCC
>Mature Secondary Structure
MMNIQITGNELITKMLNDWYRDIRAQRISEAKKLKEEIDKKLYIIESDVNVSFHYYLLEF
CEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHH
RYKVLIDGLGNLKKAFDKIDALPKPNDEYSNYYYYLFKAIHYTILTNYSEASNYFEKAEG
HHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
LLEHISDEIEYAEFNYRVAILKYHLHYAYSAIEYASKARDIFVKQAGYEVNIALCENILG
HHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHC
LSFSELKQHDKGEEYIASAINILQKNDAEMLILRIRHNLGLLYASQNLSVLAIRHLSEVS
CCHHHHHCCCCCHHHHHHHHHHHHCCCHHHEEEEEHHCCEEEEECCCCHHHHHHHHHHHH
KKMPTHYKAIFLEAREYYKLGEIEKAKELIESGLKVCKELKNDEYRYHFLILEGFCQHLE
HHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHHHCC
VEKIEKIILEGFSYFERKNLSEYIHEYTESLALEFHKVGNIEKAEKYFFMSYEIKKRIFE
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHEEHHHHHHHHHHH
KEALK
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]