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The map label for this gene is gidB

Identifier: 49476316

GI number: 49476316

Start: 1925236

End: 1925883

Strand: Reverse

Name: gidB

Synonym: BH16670

Alternate gene names: 49476316

Gene position: 1925883-1925236 (Counterclockwise)

Preceding gene: 49476317

Following gene: 49476315

Centisome position: 99.73

GC content: 31.48

Gene sequence:

>648_bases
ATGGATTTTTCTATAGAACAAAAATATCAAGAGCTTTTAAAAATAATTTCTTCTGTTTCACGTGAAACGATGCAGGATTT
AATGCATTTTGAATCTTTGATAATACAATGGAATAAACATATTAATTTAATATCTTCTTCAACAATACCTCTTTTATGGA
CACGTCATATTTTGGATTCAGCACAAATCTACCCTTTACACAGTGATCTTCTGCATTGGTGTGATCTTGGATCAGGTGGT
GGATTTCCTGCAATTGTTATTGCTATTTTTATGAAAGAAAAAAAAACAGGACATATTGATCTCGTTGAAAGCAATGGAAA
AAAAGTAGCTTTTTTACGAACAGTTATTGCTCAACTTGATCTTCCAGCAACGGTTTATCATTGTAGAATTGAAGATGTAA
CTCAAAAAATAAAAAATCCAGAGGTTATAACAGCACGGGGATTAGCTTGCCTAGATGATCTTTTAAGGCTTATTTTTCCT
TTATTAACACAAAAAACAATCGCTCTTTTGCAAAAAGGTCGGGATTACTCTAAAGAAATAAAAAATGCCTCTGCCAATTG
GCAGTTTGATCTGCTAAAACATAAGAGTAAAATTGATGAAAATTCTGTTATTTTAGAAATTTCTCAGGTTCGATCATTTA
GAGGGTAA

Upstream 100 bases:

>100_bases
TTGCTGATGCACAAAAAATTGATGGTATGACGCCAGCAGCATTATCACTTATTATCACTTATATTCAACGTCAAAGACGT
GAAAAGGCTAAATCAGCTTA

Downstream 100 bases:

>100_bases
AGCAAAATGAGCGAAATGCGGATTATCGCTATTGCAAACCAAAAAGGTGGAGTTGGAAAAACAACCACAGCAATAAATCT
TGCAACAGCTTTGGCAGCCA

Product: 16S rRNA methyltransferase GidB

Products: NA

Alternate protein names: 16S rRNA 7-methylguanosine methyltransferase; 16S rRNA m7G methyltransferase

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MDFSIEQKYQELLKIISSVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDSAQIYPLHSDLLHWCDLGSGG
GFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLDLPATVYHCRIEDVTQKIKNPEVITARGLACLDDLLRLIFP
LLTQKTIALLQKGRDYSKEIKNASANWQFDLLKHKSKIDENSVILEISQVRSFRG

Sequences:

>Translated_215_residues
MDFSIEQKYQELLKIISSVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDSAQIYPLHSDLLHWCDLGSGG
GFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLDLPATVYHCRIEDVTQKIKNPEVITARGLACLDDLLRLIFP
LLTQKTIALLQKGRDYSKEIKNASANWQFDLLKHKSKIDENSVILEISQVRSFRG
>Mature_215_residues
MDFSIEQKYQELLKIISSVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDSAQIYPLHSDLLHWCDLGSGG
GFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLDLPATVYHCRIEDVTQKIKNPEVITARGLACLDDLLRLIFP
LLTQKTIALLQKGRDYSKEIKNASANWQFDLLKHKSKIDENSVILEISQVRSFRG

Specific function: Specifically methylates the N7 position of guanosine in position 527 of 16S rRNA

COG id: COG0357

COG function: function code M; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RNA methyltransferase rsmG family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RSMG_BARHE (Q6G1L0)

Other databases:

- EMBL:   BX897699
- RefSeq:   YP_034357.1
- ProteinModelPortal:   Q6G1L0
- SMR:   Q6G1L0
- GeneID:   2864739
- GenomeReviews:   BX897699_GR
- KEGG:   bhe:BH16670
- NMPDR:   fig|283166.1.peg.1485
- HOGENOM:   HBG686577
- OMA:   HCRIEDV
- ProtClustDB:   PRK00107
- BioCyc:   BHEN283166:BH16670-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00074
- InterPro:   IPR003682
- PIRSF:   PIRSF003078
- TIGRFAMs:   TIGR00138

Pfam domain/function: PF02527 GidB

EC number: =2.1.1.170

Molecular weight: Translated: 24566; Mature: 24566

Theoretical pI: Translated: 8.48; Mature: 8.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSIEQKYQELLKIISSVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCC
AQIYPLHSDLLHWCDLGSGGGFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLD
CEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC
LPATVYHCRIEDVTQKIKNPEVITARGLACLDDLLRLIFPLLTQKTIALLQKGRDYSKEI
CCHHHHEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KNASANWQFDLLKHKSKIDENSVILEISQVRSFRG
HCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHCCCC
>Mature Secondary Structure
MDFSIEQKYQELLKIISSVSRETMQDLMHFESLIIQWNKHINLISSSTIPLLWTRHILDS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHCC
AQIYPLHSDLLHWCDLGSGGGFPAIVIAIFMKEKKTGHIDLVESNGKKVAFLRTVIAQLD
CEEEECHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCC
LPATVYHCRIEDVTQKIKNPEVITARGLACLDDLLRLIFPLLTQKTIALLQKGRDYSKEI
CCHHHHEEEHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
KNASANWQFDLLKHKSKIDENSVILEISQVRSFRG
HCCCCCCHHHHHHHHHCCCCCCEEEEHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA