Click here to switch to the map view.

The map label for this gene is ATPH

Identifier: 49476190

GI number: 49476190

Start: 1766960

End: 1767553

Strand: Reverse

Name: ATPH

Synonym: BH15350

Alternate gene names: 49476190

Gene position: 1767553-1766960 (Counterclockwise)

Preceding gene: 49476191

Following gene: 49476189

Centisome position: 91.53

GC content: 41.41

Gene sequence:

>594_bases
GTGTCGAATTCATTTTCTCTTATACCGCTGCCATTGGTAGATCAACGCTATGCACAAGCACTTTTTGATCTCGCTCAAGA
AGAAGGGTTGGTCGAAATACTTGAAAAGGCAGTCGAATCTTTTTTGATGGTCTTAGATCAAGATGAAGACTTAAAACACT
TTGTGCAAAGCCCATTCTTTTCCGTAAAAGAGCAGGTTAAAGTTATGCATTCTGTTTGTGAAAATATTCCGTTTGCTGAT
GAAGGTGCTGGTCAGATTTTGAGTCGTTTTTTGCGTGTTATTACGCTAAACCATCGCCTTCGTGCTTTGTCTGGTATTTT
ACATGCTTTTCAGCGTCGTGTTGCTCTCTCTCGTAGGGAATTTTCAGCACAGATTATTGCTGCTCGCCCACTAAACTCTC
AGCAAGAACAACAGTTGCAAAGCGTTTTGGAAAGTGTCGTTGGGGGAAAAGTTTTTCTAAACATCTGTGTCGATCCAGAA
ATTCTTGGTGGGTTGATCATTCGTCTGGGATCATCACAGATCGATACGTCCCTTATGGCGAAGTTGTCTTCGCTTAAGAT
TGCATTGAAAAAGAGGTCAGCTGATGGATATTAG

Upstream 100 bases:

>100_bases
TTGTTCTGGATTTTAAGAAACAGATTCTTAAAATTTGGGTGCTCATTCATTTAATCTGATAACTATCAGAGAATCGCTCA
AGGGAAAGAGGCGGTATTTC

Downstream 100 bases:

>100_bases
ACCATCTGAAATTTCAAAAATTCTAAAAGAACAAATCAAAAACTTTGACCAAAAGGCTGAAGTTTCAGAAATTGGTTGGG
TTTTGTCTGTGGGTGATGGT

Product: ATP synthase delta chain

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(1) sector subunit delta; F-type ATPase subunit delta; F-ATPase subunit delta

Number of amino acids: Translated: 197; Mature: 196

Protein sequence:

>197_residues
MSNSFSLIPLPLVDQRYAQALFDLAQEEGLVEILEKAVESFLMVLDQDEDLKHFVQSPFFSVKEQVKVMHSVCENIPFAD
EGAGQILSRFLRVITLNHRLRALSGILHAFQRRVALSRREFSAQIIAARPLNSQQEQQLQSVLESVVGGKVFLNICVDPE
ILGGLIIRLGSSQIDTSLMAKLSSLKIALKKRSADGY

Sequences:

>Translated_197_residues
MSNSFSLIPLPLVDQRYAQALFDLAQEEGLVEILEKAVESFLMVLDQDEDLKHFVQSPFFSVKEQVKVMHSVCENIPFAD
EGAGQILSRFLRVITLNHRLRALSGILHAFQRRVALSRREFSAQIIAARPLNSQQEQQLQSVLESVVGGKVFLNICVDPE
ILGGLIIRLGSSQIDTSLMAKLSSLKIALKKRSADGY
>Mature_196_residues
SNSFSLIPLPLVDQRYAQALFDLAQEEGLVEILEKAVESFLMVLDQDEDLKHFVQSPFFSVKEQVKVMHSVCENIPFADE
GAGQILSRFLRVITLNHRLRALSGILHAFQRRVALSRREFSAQIIAARPLNSQQEQQLQSVLESVVGGKVFLNICVDPEI
LGGLIIRLGSSQIDTSLMAKLSSLKIALKKRSADGY

Specific function: This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes from CF(0) to CF(1) or is implicated in proton conduction

COG id: COG0712

COG function: function code C; F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein)

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase delta chain family

Homologues:

Organism=Homo sapiens, GI4502303, Length=181, Percent_Identity=26.5193370165746, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI71984710, Length=189, Percent_Identity=22.7513227513227, Blast_Score=67, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI71984717, Length=189, Percent_Identity=22.7513227513227, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI24647054, Length=169, Percent_Identity=28.9940828402367, Blast_Score=88, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24647056, Length=88, Percent_Identity=35.2272727272727, Blast_Score=66, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPD_BARHE (Q6G1W6)

Other databases:

- EMBL:   BX897699
- RefSeq:   YP_034231.1
- ProteinModelPortal:   Q6G1W6
- GeneID:   2865396
- GenomeReviews:   BX897699_GR
- KEGG:   bhe:BH15350
- NMPDR:   fig|283166.1.peg.1359
- HOGENOM:   HBG668108
- OMA:   DASLKSY
- PhylomeDB:   Q6G1W6
- ProtClustDB:   CLSK927332
- BioCyc:   BHEN283166:BH15350-MONOMER
- HAMAP:   MF_01416
- InterPro:   IPR000711
- InterPro:   IPR020781
- Gene3D:   G3DSA:1.10.520.20
- PANTHER:   PTHR11910
- PRINTS:   PR00125
- TIGRFAMs:   TIGR01145

Pfam domain/function: PF00213 OSCP; SSF47928 ATPsynt_OSCP

EC number: 3.6.3.14

Molecular weight: Translated: 21980; Mature: 21849

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: PS00389 ATPASE_DELTA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNSFSLIPLPLVDQRYAQALFDLAQEEGLVEILEKAVESFLMVLDQDEDLKHFVQSPFF
CCCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
SVKEQVKVMHSVCENIPFADEGAGQILSRFLRVITLNHRLRALSGILHAFQRRVALSRRE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAQIIAARPLNSQQEQQLQSVLESVVGGKVFLNICVDPEILGGLIIRLGSSQIDTSLMA
HHHHHHEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHH
KLSSLKIALKKRSADGY
HHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SNSFSLIPLPLVDQRYAQALFDLAQEEGLVEILEKAVESFLMVLDQDEDLKHFVQSPFF
CCCCCEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCHHH
SVKEQVKVMHSVCENIPFADEGAGQILSRFLRVITLNHRLRALSGILHAFQRRVALSRRE
HHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSAQIIAARPLNSQQEQQLQSVLESVVGGKVFLNICVDPEILGGLIIRLGSSQIDTSLMA
HHHHHHEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHCCHHHHHHHHH
KLSSLKIALKKRSADGY
HHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA