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The map label for this gene is ybgC [C]

Identifier: 49476145

GI number: 49476145

Start: 1708424

End: 1708864

Strand: Reverse

Name: ybgC [C]

Synonym: BH14880

Alternate gene names: 49476145

Gene position: 1708864-1708424 (Counterclockwise)

Preceding gene: 49476146

Following gene: 49476144

Centisome position: 88.49

GC content: 37.64

Gene sequence:

>441_bases
ATGCTGGAAAAAAAAACTTTCAAAAGTAGCCATACAAATGCTTTTCATGATTTTCAGGCTCGGGTTTATGTTGCTGATAC
AGATTTTTCTGGTGTGGTTTACCATGCGCGCTATCTAGAATTTTTTGAAAGGGGACGCTCAGAGTTTTTACGGGATACAG
GTTTTAATAACACGCTTTTAGCATCAGGTGTTGAGGGTGAAAAACTCTTTTTTGTTGTACGTCATATGGAAATCAATTTT
TCTAGGCCAGCACAAATCGACAATCTTTTAACCATTAAAACACGCATCAGTCGTCTTCAAGGCGCACGCTTTTTTATGGA
GCAATATATTCTACATGGTGAGAGCATGTTGGTCACAGCAAAAGTTGAAATTGCCCTCATTAATGAAGAGGGAAAACCAC
GACGTTTACCTAAAGAGCTTTTTTCAACAATTGTTGTTTAA

Upstream 100 bases:

>100_bases
CTTTGTGCTCTGGCCTTCACGGTTTTAACACAAAAGCATGTTCAATTGCGCAAGACGCTCAATAATTCATTATGATAGAC
GATTTTATGGGATGAAGCTG

Downstream 100 bases:

>100_bases
AAGTGACCTTTGTTAAAAAAGTGCTATGATAGTGGTTCTCTCTAAAGACAAAGTGCAGTTTGTTTTGTTAAATTTAGAAA
CTATAAAACAATCTGTTTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MLEKKTFKSSHTNAFHDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINF
SRPAQIDNLLTIKTRISRLQGARFFMEQYILHGESMLVTAKVEIALINEEGKPRRLPKELFSTIVV

Sequences:

>Translated_146_residues
MLEKKTFKSSHTNAFHDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINF
SRPAQIDNLLTIKTRISRLQGARFFMEQYILHGESMLVTAKVEIALINEEGKPRRLPKELFSTIVV
>Mature_146_residues
MLEKKTFKSSHTNAFHDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDTGFNNTLLASGVEGEKLFFVVRHMEINF
SRPAQIDNLLTIKTRISRLQGARFFMEQYILHGESMLVTAKVEIALINEEGKPRRLPKELFSTIVV

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=127, Percent_Identity=37.7952755905512, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 16954; Mature: 16954

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS01328 4HBCOA_THIOESTERASE ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLEKKTFKSSHTNAFHDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDTGFNNTLL
CCCCCCCCCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ASGVEGEKLFFVVRHMEINFSRPAQIDNLLTIKTRISRLQGARFFMEQYILHGESMLVTA
ECCCCCCEEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
KVEIALINEEGKPRRLPKELFSTIVV
EEEEEEECCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MLEKKTFKSSHTNAFHDFQARVYVADTDFSGVVYHARYLEFFERGRSEFLRDTGFNNTLL
CCCCCCCCCCCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEE
ASGVEGEKLFFVVRHMEINFSRPAQIDNLLTIKTRISRLQGARFFMEQYILHGESMLVTA
ECCCCCCEEEEEEEEEEECCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
KVEIALINEEGKPRRLPKELFSTIVV
EEEEEEECCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]