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The map label for this gene is tnpR [C]

Identifier: 49476098

GI number: 49476098

Start: 1641708

End: 1641863

Strand: Reverse

Name: tnpR [C]

Synonym: BH14360

Alternate gene names: 49476098

Gene position: 1641863-1641708 (Counterclockwise)

Preceding gene: 49476104

Following gene: 49476090

Centisome position: 85.02

GC content: 40.38

Gene sequence:

>156_bases
ATGGTCATTCAAATTTTAGCTGTTGTAACAGAGGTTGAACCTGCACGTATTTTGGAGCGGACCAATGATGGGTGCACCGC
TGCTATGGCATCAGGTATAAAATTTGGTAGAAAACCCTATCCTAAAATAGAGATGACTCTCTCACTGATGAAATAA

Upstream 100 bases:

>100_bases
AACAGTCTTTGTTTTCGAAAATGCTCTAAAGACCGCAGAGGCATCGTAGCAGAGAGACATCGTAGCGAAGATACATCGTA
CCGGAGATACAAGAGGAGAA

Downstream 100 bases:

>100_bases
AGAATTTCATTCAAAATAATCAAGAAGAAAACAGTTCTCTCTTTTGCGACTTATTGCAGGTTTAAACGACAGATCTCTCT
AAAGAATTCAGAGAGCCTGC

Product: resolvase fragment-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 51; Mature: 51

Protein sequence:

>51_residues
MVIQILAVVTEVEPARILERTNDGCTAAMASGIKFGRKPYPKIEMTLSLMK

Sequences:

>Translated_51_residues
MVIQILAVVTEVEPARILERTNDGCTAAMASGIKFGRKPYPKIEMTLSLMK
>Mature_51_residues
MVIQILAVVTEVEPARILERTNDGCTAAMASGIKFGRKPYPKIEMTLSLMK

Specific function: This Protein Catalyzes The Site-Specific Recombination Of The Transposon And Also Regulates Its Frequency Of Transposition. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5623; Mature: 5623

Theoretical pI: Translated: 9.34; Mature: 9.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
9.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVIQILAVVTEVEPARILERTNDGCTAAMASGIKFGRKPYPKIEMTLSLMK
CHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEHEEEECC
>Mature Secondary Structure
MVIQILAVVTEVEPARILERTNDGCTAAMASGIKFGRKPYPKIEMTLSLMK
CHHHHHHHHHCCCHHHHHHCCCCCHHHHHHHHHCCCCCCCCCEEHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA