| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49476076
Identifier: 49476076
GI number: 49476076
Start: 1623718
End: 1624002
Strand: Reverse
Name: 49476076
Synonym: BH14120
Alternate gene names: NA
Gene position: 1624002-1623718 (Counterclockwise)
Preceding gene: 49476077
Following gene: 49476075
Centisome position: 84.1
GC content: 44.56
Gene sequence:
>285_bases CTGGCAAAACCAATGGAACAGAATAACAAACAAACAGAGCAAAAATTAAGTAAAGGGCGCGAACAAATAAAAAAAGCCCA CCAAACGCAAACAAAGCCGAATGTGAAGCAAACAGAGATCTCTTCAATCCGTCCTCCCCATCTTTGTCCCATTTGTGGTC AGATGGCACAACAAAACGCCTATCCTTTCTGTTCAACACGATGCCGGGCGATTGATCTGAACCGATGGCTTTCGGGCTCT TATATCTTGCCACCCCTGCCACAAAAAGCTGATGAAGAAGAGTAA
Upstream 100 bases:
>100_bases GTGGGCTTGCCTTTGGCTGAAACAATGGATCTTCTCACGGCTTATCACTATCCACTTCTCACTCATTGGAATGGAAAAAC ACATTAGAGAAACGGATTGA
Downstream 100 bases:
>100_bases AAAGGCTGCCTAGTCTTGAGAAGCGTTGGAAGTCCGGCTTTGGGTTGAACAGGGCAGGTATTTGAAGTTGAGCAGGGCTG GGCGTTTGAGCTTGGGAAAT
Product: zinc-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 94; Mature: 93
Protein sequence:
>94_residues MAKPMEQNNKQTEQKLSKGREQIKKAHQTQTKPNVKQTEISSIRPPHLCPICGQMAQQNAYPFCSTRCRAIDLNRWLSGS YILPPLPQKADEEE
Sequences:
>Translated_94_residues MAKPMEQNNKQTEQKLSKGREQIKKAHQTQTKPNVKQTEISSIRPPHLCPICGQMAQQNAYPFCSTRCRAIDLNRWLSGS YILPPLPQKADEEE >Mature_93_residues AKPMEQNNKQTEQKLSKGREQIKKAHQTQTKPNVKQTEISSIRPPHLCPICGQMAQQNAYPFCSTRCRAIDLNRWLSGSY ILPPLPQKADEEE
Specific function: Unknown
COG id: COG3024
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0243 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005584 - InterPro: IPR013088 [H]
Pfam domain/function: PF03884 DUF329 [H]
EC number: NA
Molecular weight: Translated: 10763; Mature: 10632
Theoretical pI: Translated: 9.36; Mature: 9.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPMEQNNKQTEQKLSKGREQIKKAHQTQTKPNVKQTEISSIRPPHLCPICGQMAQQNA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCC YPFCSTRCRAIDLNRWLSGSYILPPLPQKADEEE CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AKPMEQNNKQTEQKLSKGREQIKKAHQTQTKPNVKQTEISSIRPPHLCPICGQMAQQNA CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCC YPFCSTRCRAIDLNRWLSGSYILPPLPQKADEEE CCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12597275 [H]