Definition Bartonella henselae str. Houston-1, complete genome.
Accession NC_005956
Length 1,931,047

Click here to switch to the map view.

The map label for this gene is 49476057

Identifier: 49476057

GI number: 49476057

Start: 1599814

End: 1600257

Strand: Reverse

Name: 49476057

Synonym: BH13920

Alternate gene names: NA

Gene position: 1600257-1599814 (Counterclockwise)

Preceding gene: 49476058

Following gene: 49476055

Centisome position: 82.87

GC content: 35.59

Gene sequence:

>444_bases
ATGGAAAAAAGAATCCGCGCGAGGCAAAAAGCTTATTTTAAAAAATTATATCGTAAGATCGCTTTTGTTTGTATACTGCT
CTTTTTCGTGGTGTGTTTTTGTTTTGGTATTATAAAAATTATCGGTTATTTTTTTTCCAACAAACAAGTAACACAACATG
TGCCTGTTGAATTGACACTTCCAGTTTTTGATCAGCGTGTGTATTGCAAGGAAATTGCTGCTTCAGTGATGCCCGATATG
AAAAAGGAAGTTTATCAGCACTGTCTTTATTTGGAAAGTGAAGCCTATTTTGCAATTCGTGAAATGTGGGATACGCTTTC
CGATACTTCAAAGAAAAGATGTATGAAAATGGTACGGCCAGGCGATGGAAACTATTTTCTCTTACAAGATTGTTTGCTCA
ATGAAAAAGACGGTGAAAAAAATAAGGCGCGCAACCACTTTTAA

Upstream 100 bases:

>100_bases
TTGATCATGTGTAGCGACAACATGTATGGTGTGCGTTGATACTTCTTTCATTTTTTGTTGTAAAAAGCTTCTCTTGAGAT
ATTCAAAGGATACGGTCTTT

Downstream 100 bases:

>100_bases
ATTTTCACGTAAAAATTTAAAGGGCGGAAAGTTGCATGAAAAAAAGATAAAAGCTGTGCTCTTACTGCAAAAAAATGTAT
AAAAATAGTGTGGCCCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 147; Mature: 147

Protein sequence:

>147_residues
MEKRIRARQKAYFKKLYRKIAFVCILLFFVVCFCFGIIKIIGYFFSNKQVTQHVPVELTLPVFDQRVYCKEIAASVMPDM
KKEVYQHCLYLESEAYFAIREMWDTLSDTSKKRCMKMVRPGDGNYFLLQDCLLNEKDGEKNKARNHF

Sequences:

>Translated_147_residues
MEKRIRARQKAYFKKLYRKIAFVCILLFFVVCFCFGIIKIIGYFFSNKQVTQHVPVELTLPVFDQRVYCKEIAASVMPDM
KKEVYQHCLYLESEAYFAIREMWDTLSDTSKKRCMKMVRPGDGNYFLLQDCLLNEKDGEKNKARNHF
>Mature_147_residues
MEKRIRARQKAYFKKLYRKIAFVCILLFFVVCFCFGIIKIIGYFFSNKQVTQHVPVELTLPVFDQRVYCKEIAASVMPDM
KKEVYQHCLYLESEAYFAIREMWDTLSDTSKKRCMKMVRPGDGNYFLLQDCLLNEKDGEKNKARNHF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17509; Mature: 17509

Theoretical pI: Translated: 9.40; Mature: 9.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.8 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
4.8 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKRIRARQKAYFKKLYRKIAFVCILLFFVVCFCFGIIKIIGYFFSNKQVTQHVPVELTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PVFDQRVYCKEIAASVMPDMKKEVYQHCLYLESEAYFAIREMWDTLSDTSKKRCMKMVRP
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDGNYFLLQDCLLNEKDGEKNKARNHF
CCCCEEEHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MEKRIRARQKAYFKKLYRKIAFVCILLFFVVCFCFGIIKIIGYFFSNKQVTQHVPVELTL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEC
PVFDQRVYCKEIAASVMPDMKKEVYQHCLYLESEAYFAIREMWDTLSDTSKKRCMKMVRP
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GDGNYFLLQDCLLNEKDGEKNKARNHF
CCCCEEEHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA