| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475996
Identifier: 49475996
GI number: 49475996
Start: 1459863
End: 1462346
Strand: Reverse
Name: 49475996
Synonym: BH13020
Alternate gene names: NA
Gene position: 1462346-1459863 (Counterclockwise)
Preceding gene: 49475997
Following gene: 49475995
Centisome position: 75.73
GC content: 41.34
Gene sequence:
>2484_bases ATGATTAAAGTATTTAGAAATCATGTGTGTTTATGTACTGTCACAACCGCTATTCTTTCTTTCCTACAAATTGGAGGAGT GGTTATTGCAAATGCAGAGGAGAGAAGTGGTGGTATGTCTTATACTATCACTGTTACTCCTGTGTCTCCTGGTATCTCAC CTAACACTTCTACTATTTTGGGGATGAGAATTGGTAGCCTTAATGGTCTGAGCGGTGATAACCTTAGCGGTATTGGAGGG GATGGCGGATCTGGTGGTAGAGATGCTAGTAGACATCTTAGTGGGAGTAACGCTGGACGTATTCTTAGTGGTTCTGGCGG TGATAGGGATGATGGTCAGTATGTTTACAAATATGACCGTGCTAAGGGAAAGCTTGTGATGTATAATGGGTTATATTATC TGTGCGATGGTTGTGGAGAGAGTACAATCGATAATAAATCTTATGAGATTACGAATGACAACGCTTCTCGATATCCCTCT AATACTGCTATAACGGTGAAAGGGAAAGGTGCAAAAGTGAAAGGGGAGAAAGTTAATGTTTTTAGTAAAAATTCAGAAAA ATCTTTTACACGGGGGGTGTCTGTATCAGAGGGGGGAAAAGTTACTTTGAATAATTTGACTCTCAAGAATGCAAAGGTAG CTCTTCATGCTAGCGATGGGATGATTGAGGTGGATGGAGGGACTATTATTGAAAGTCAAATGGCTGTCCAAACAATAGGG GGAAAAACGCATGTTGTTTTAAACAACACAAAGATTGAAACAAATAGTGGAAAGGCAAGCCTTTATAGTTATGGCAGTGC AGAAATTAAGATGAATGGTGGATCAGTTGATTTCAAGGACAGTCATGGGGTTTCTTCAACGCTAAACGGCAAGATAGCTT TTGATAATGTTACTATCACTGGAAAGAGTAGTAAAGATAAAAGTCATGCGGTTTTTCTTATGGATTTTGGTGGTTCTGTT GATTTTAAGGGCGGCACTATTAATGTTATTGATATTCACGGCATTTTGTCAGAAAATACAGTTAGTATTGTTAATTCGAT TCCACTGTATGAGAATTTGTCTGAGCGTGATCGTATGACTGAGGTTAATCTCACATCTTCTTCTGTTACAGTGGAGGGTG AAAGATCTTACGGTATATATTTTCGGGGGGAAAAGCCAGGGGAGGAATTTGAGAATAGAGGAAAGCTAGAAGAGGAAAAA ACGCTACCCAGATTGGAAGCTATTAATTTGAGGCAGACAATGTTTTCTGCTCCAGACAGTGTGGCTCTTTATAGTACCGA TAGTACTTATGGTGTTGTTAATTTAATGCAAAGTACCCTTTCAGGGCGTTCATTGTTAAGAGCTGAGAGGGGAGCTTTGG TGAAAGTTTTAGCCAGTGCCTCTACCCTTGAAGGGAGCACTCATGTTGATGATCGTTCTACTGCTGAGCTCTATTTGGGT GCTGGTTCGACATGGATTTTGAAACAAAAGCAAGAGAGGGATTCACGTGAATCTGCTCGTATAAATGATTCATTTGTTTC ATTCGTAAGTCTTATAAATGATAGTTCTATTAAGTTTCACAAACTGAAATCTGCTCCAACTTACGATTATCAAACGCTGC ACATTGGAAATGGGACAGGTACCGTTTATAAAGCGCATGATGGTGCACATATTTATTTGAACACATATCTGAATGAGGGG GGAGACCTTAACAAGCAAAAGACTGACCGTGTTTTGATATATGGTGATGTTTCTGGAACAACGACAGTCCATGTGCGCAG TATGCCAGAAAGTCCAGGAGAACCTACGGGGAGTGGTGGAAATAACCAAGGGATTTCACTCATTCAGGTTTCTGGAAAGG CAGAAAAAGATTCTTTTCAGTTAGATGGCGGTTACGTTACGGTAGGGCATTCACCTTATCAGTATACGCTCTATGCTTAT GGGCCAGAATCTGATTTAGGGAAGGCACATCCCAATCAAAGATTAGTTAAAGGTGAAGAAGCGTTTTGGGATTTTCGCCT CGAAAATAGATATACTAAGCCATCTCCTGAACCTGAGCCAGAACCGGGACCTCGTCCAGAGCCAACTCCGCCACCTCGTC CTGATCCGGGAGTTAAAGCGGTTGTACCACAAGTTCCCACATATCTGCTTTTGCCCAATGCCTTGTTTCATAGTGGTTTG ATGCATGTTGGCAATCAAGCTAAGCGGTTAGAAGCTTTACGCACTGTTTCTGGTGGTTTCTTGCAAAGTGAGGAAAAGCC TGCCTTTTTTGTGCGCGGTTATGGGAGTGATTACCGTTATACCTCCAATCTTTCTGTGCTGGAATATGGTTATGGGGGCG AGCTTAGCTATAATGCAGTCGAAGCGGGTGTTTTACTGAAAACAATTGAAGGTGAATATAGTAACACCTCTTTTGGGGTT ATAGGGACTTATGAGAGACTTTCTTTGCAACCTTTAGAGGTTGAACAAAGCGCCAAAAAAGTGCCTTTGATAAATGGTCA GTGA
Upstream 100 bases:
>100_bases CCTTTTGGTTTAGCCTTTTGAGTGTTGAGGGAGTAAGCGGGATGTTTTTAGGAGTGCTTTTATTTTCCAATGAGAGGGGA AGAAAAGTTTCGAGGGAATT
Downstream 100 bases:
>100_bases CAGCTTATGGCGGTTTGCAGTGTGATACGGATTTTTATTTGGATGGTCTTTTATCCTATGGTTTGTTTAAGGGTGATGTG GTCACTCTTGCACGTGGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Outer Membrane Autotransporter; Surface Protein; Inducible Autotransporter Protein B; Inducible Bartonella Autotransporter C; Inducible Autotransporter Protein C; Inducible Bartonella Autotransporter E; Inducible Bartonella Autotransporter B; Inducible Autotransporter Protein A; Inducible Bartonella Autotransporter F; Inducible Autotransporter ProteinE; Inducible Bartonella Autotransporter A
Number of amino acids: Translated: 827; Mature: 827
Protein sequence:
>827_residues MIKVFRNHVCLCTVTTAILSFLQIGGVVIANAEERSGGMSYTITVTPVSPGISPNTSTILGMRIGSLNGLSGDNLSGIGG DGGSGGRDASRHLSGSNAGRILSGSGGDRDDGQYVYKYDRAKGKLVMYNGLYYLCDGCGESTIDNKSYEITNDNASRYPS NTAITVKGKGAKVKGEKVNVFSKNSEKSFTRGVSVSEGGKVTLNNLTLKNAKVALHASDGMIEVDGGTIIESQMAVQTIG GKTHVVLNNTKIETNSGKASLYSYGSAEIKMNGGSVDFKDSHGVSSTLNGKIAFDNVTITGKSSKDKSHAVFLMDFGGSV DFKGGTINVIDIHGILSENTVSIVNSIPLYENLSERDRMTEVNLTSSSVTVEGERSYGIYFRGEKPGEEFENRGKLEEEK TLPRLEAINLRQTMFSAPDSVALYSTDSTYGVVNLMQSTLSGRSLLRAERGALVKVLASASTLEGSTHVDDRSTAELYLG AGSTWILKQKQERDSRESARINDSFVSFVSLINDSSIKFHKLKSAPTYDYQTLHIGNGTGTVYKAHDGAHIYLNTYLNEG GDLNKQKTDRVLIYGDVSGTTTVHVRSMPESPGEPTGSGGNNQGISLIQVSGKAEKDSFQLDGGYVTVGHSPYQYTLYAY GPESDLGKAHPNQRLVKGEEAFWDFRLENRYTKPSPEPEPEPGPRPEPTPPPRPDPGVKAVVPQVPTYLLLPNALFHSGL MHVGNQAKRLEALRTVSGGFLQSEEKPAFFVRGYGSDYRYTSNLSVLEYGYGGELSYNAVEAGVLLKTIEGEYSNTSFGV IGTYERLSLQPLEVEQSAKKVPLINGQ
Sequences:
>Translated_827_residues MIKVFRNHVCLCTVTTAILSFLQIGGVVIANAEERSGGMSYTITVTPVSPGISPNTSTILGMRIGSLNGLSGDNLSGIGG DGGSGGRDASRHLSGSNAGRILSGSGGDRDDGQYVYKYDRAKGKLVMYNGLYYLCDGCGESTIDNKSYEITNDNASRYPS NTAITVKGKGAKVKGEKVNVFSKNSEKSFTRGVSVSEGGKVTLNNLTLKNAKVALHASDGMIEVDGGTIIESQMAVQTIG GKTHVVLNNTKIETNSGKASLYSYGSAEIKMNGGSVDFKDSHGVSSTLNGKIAFDNVTITGKSSKDKSHAVFLMDFGGSV DFKGGTINVIDIHGILSENTVSIVNSIPLYENLSERDRMTEVNLTSSSVTVEGERSYGIYFRGEKPGEEFENRGKLEEEK TLPRLEAINLRQTMFSAPDSVALYSTDSTYGVVNLMQSTLSGRSLLRAERGALVKVLASASTLEGSTHVDDRSTAELYLG AGSTWILKQKQERDSRESARINDSFVSFVSLINDSSIKFHKLKSAPTYDYQTLHIGNGTGTVYKAHDGAHIYLNTYLNEG GDLNKQKTDRVLIYGDVSGTTTVHVRSMPESPGEPTGSGGNNQGISLIQVSGKAEKDSFQLDGGYVTVGHSPYQYTLYAY GPESDLGKAHPNQRLVKGEEAFWDFRLENRYTKPSPEPEPEPGPRPEPTPPPRPDPGVKAVVPQVPTYLLLPNALFHSGL MHVGNQAKRLEALRTVSGGFLQSEEKPAFFVRGYGSDYRYTSNLSVLEYGYGGELSYNAVEAGVLLKTIEGEYSNTSFGV IGTYERLSLQPLEVEQSAKKVPLINGQ >Mature_827_residues MIKVFRNHVCLCTVTTAILSFLQIGGVVIANAEERSGGMSYTITVTPVSPGISPNTSTILGMRIGSLNGLSGDNLSGIGG DGGSGGRDASRHLSGSNAGRILSGSGGDRDDGQYVYKYDRAKGKLVMYNGLYYLCDGCGESTIDNKSYEITNDNASRYPS NTAITVKGKGAKVKGEKVNVFSKNSEKSFTRGVSVSEGGKVTLNNLTLKNAKVALHASDGMIEVDGGTIIESQMAVQTIG GKTHVVLNNTKIETNSGKASLYSYGSAEIKMNGGSVDFKDSHGVSSTLNGKIAFDNVTITGKSSKDKSHAVFLMDFGGSV DFKGGTINVIDIHGILSENTVSIVNSIPLYENLSERDRMTEVNLTSSSVTVEGERSYGIYFRGEKPGEEFENRGKLEEEK TLPRLEAINLRQTMFSAPDSVALYSTDSTYGVVNLMQSTLSGRSLLRAERGALVKVLASASTLEGSTHVDDRSTAELYLG AGSTWILKQKQERDSRESARINDSFVSFVSLINDSSIKFHKLKSAPTYDYQTLHIGNGTGTVYKAHDGAHIYLNTYLNEG GDLNKQKTDRVLIYGDVSGTTTVHVRSMPESPGEPTGSGGNNQGISLIQVSGKAEKDSFQLDGGYVTVGHSPYQYTLYAY GPESDLGKAHPNQRLVKGEEAFWDFRLENRYTKPSPEPEPEPGPRPEPTPPPRPDPGVKAVVPQVPTYLLLPNALFHSGL MHVGNQAKRLEALRTVSGGFLQSEEKPAFFVRGYGSDYRYTSNLSVLEYGYGGELSYNAVEAGVLLKTIEGEYSNTSFGV IGTYERLSLQPLEVEQSAKKVPLINGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89055; Mature: 89055
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKVFRNHVCLCTVTTAILSFLQIGGVVIANAEERSGGMSYTITVTPVSPGISPNTSTIL CEEEECCCEEEEHHHHHHHHHHHHCCEEEECCHHCCCCEEEEEEEEECCCCCCCCCCEEE GMRIGSLNGLSGDNLSGIGGDGGSGGRDASRHLSGSNAGRILSGSGGDRDDGQYVYKYDR EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEC AKGKLVMYNGLYYLCDGCGESTIDNKSYEITNDNASRYPSNTAITVKGKGAKVKGEKVNV CCCCEEEECCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCEECCCEEEE FSKNSEKSFTRGVSVSEGGKVTLNNLTLKNAKVALHASDGMIEVDGGTIIESQMAVQTIG EECCCCCHHHCCCEECCCCEEEEEEEEEECEEEEEEECCCEEEECCCEEEECCEEEEECC GKTHVVLNNTKIETNSGKASLYSYGSAEIKMNGGSVDFKDSHGVSSTLNGKIAFDNVTIT CEEEEEEECCEEECCCCCEEEEECCCEEEEECCCEEECCCCCCCCCCCCCEEEEEEEEEE GKSSKDKSHAVFLMDFGGSVDFKGGTINVIDIHGILSENTVSIVNSIPLYENLSERDRMT CCCCCCCCCEEEEEECCCEEEECCCEEEEEEEEEEECCCEEEEHHCCCCCCCCCHHCCEE EVNLTSSSVTVEGERSYGIYFRGEKPGEEFENRGKLEEEKTLPRLEAINLRQTMFSAPDS EEEECCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCHHHCCCCHHHCCHHHHHHCCCCC VALYSTDSTYGVVNLMQSTLSGRSLLRAERGALVKVLASASTLEGSTHVDDRSTAELYLG EEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCHHCCCCCCCCCCCCEEEEEE AGSTWILKQKQERDSRESARINDSFVSFVSLINDSSIKFHKLKSAPTYDYQTLHIGNGTG CCCEEEEECHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCC TVYKAHDGAHIYLNTYLNEGGDLNKQKTDRVLIYGDVSGTTTVHVRSMPESPGEPTGSGG EEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC NNQGISLIQVSGKAEKDSFQLDGGYVTVGHSPYQYTLYAYGPESDLGKAHPNQRLVKGEE CCCCEEEEEECCCCCCCCEEECCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCEECCCC AFWDFRLENRYTKPSPEPEPEPGPRPEPTPPPRPDPGVKAVVPQVPTYLLLPNALFHSGL CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECHHHHHHHH MHVGNQAKRLEALRTVSGGFLQSEEKPAFFVRGYGSDYRYTSNLSVLEYGYGGELSYNAV HHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCEECCEE EAGVLLKTIEGEYSNTSFGVIGTYERLSLQPLEVEQSAKKVPLINGQ ECCEEEEEECCCCCCCEEEEEECHHHCCCCCCCHHHCCCCCCCCCCC >Mature Secondary Structure MIKVFRNHVCLCTVTTAILSFLQIGGVVIANAEERSGGMSYTITVTPVSPGISPNTSTIL CEEEECCCEEEEHHHHHHHHHHHHCCEEEECCHHCCCCEEEEEEEEECCCCCCCCCCEEE GMRIGSLNGLSGDNLSGIGGDGGSGGRDASRHLSGSNAGRILSGSGGDRDDGQYVYKYDR EEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCEEEEEEC AKGKLVMYNGLYYLCDGCGESTIDNKSYEITNDNASRYPSNTAITVKGKGAKVKGEKVNV CCCCEEEECCEEEEEECCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCEECCCEEEE FSKNSEKSFTRGVSVSEGGKVTLNNLTLKNAKVALHASDGMIEVDGGTIIESQMAVQTIG EECCCCCHHHCCCEECCCCEEEEEEEEEECEEEEEEECCCEEEECCCEEEECCEEEEECC GKTHVVLNNTKIETNSGKASLYSYGSAEIKMNGGSVDFKDSHGVSSTLNGKIAFDNVTIT CEEEEEEECCEEECCCCCEEEEECCCEEEEECCCEEECCCCCCCCCCCCCEEEEEEEEEE GKSSKDKSHAVFLMDFGGSVDFKGGTINVIDIHGILSENTVSIVNSIPLYENLSERDRMT CCCCCCCCCEEEEEECCCEEEECCCEEEEEEEEEEECCCEEEEHHCCCCCCCCCHHCCEE EVNLTSSSVTVEGERSYGIYFRGEKPGEEFENRGKLEEEKTLPRLEAINLRQTMFSAPDS EEEECCCEEEEECCCCEEEEEECCCCCHHHHHCCCCCHHHCCCCHHHCCHHHHHHCCCCC VALYSTDSTYGVVNLMQSTLSGRSLLRAERGALVKVLASASTLEGSTHVDDRSTAELYLG EEEEECCCCHHHHHHHHHHHCCHHHHHHHCCCEEEEEECCHHCCCCCCCCCCCCEEEEEE AGSTWILKQKQERDSRESARINDSFVSFVSLINDSSIKFHKLKSAPTYDYQTLHIGNGTG CCCEEEEECHHHCCCHHHCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCC TVYKAHDGAHIYLNTYLNEGGDLNKQKTDRVLIYGDVSGTTTVHVRSMPESPGEPTGSGG EEEEECCCCEEEEEEEECCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCC NNQGISLIQVSGKAEKDSFQLDGGYVTVGHSPYQYTLYAYGPESDLGKAHPNQRLVKGEE CCCCEEEEEECCCCCCCCEEECCCEEEECCCCEEEEEEEECCCCCCCCCCCCCCEECCCC AFWDFRLENRYTKPSPEPEPEPGPRPEPTPPPRPDPGVKAVVPQVPTYLLLPNALFHSGL CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCEEEEECHHHHHHHH MHVGNQAKRLEALRTVSGGFLQSEEKPAFFVRGYGSDYRYTSNLSVLEYGYGGELSYNAV HHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCEEEECCCEEEEECCCCCEECCEE EAGVLLKTIEGEYSNTSFGVIGTYERLSLQPLEVEQSAKKVPLINGQ ECCEEEEEECCCCCCCEEEEEECHHHCCCCCCCHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA