| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475995
Identifier: 49475995
GI number: 49475995
Start: 1459285
End: 1459866
Strand: Reverse
Name: 49475995
Synonym: BH13010
Alternate gene names: NA
Gene position: 1459866-1459285 (Counterclockwise)
Preceding gene: 49475996
Following gene: 49475990
Centisome position: 75.6
GC content: 42.44
Gene sequence:
>582_bases GTGACAGCTTATGGCGGTTTGCAGTGTGATACGGATTTTTATTTGGATGGTCTTTTATCCTATGGTTTGTTTAAGGGTGA TGTGGTCACTCTTGCACGTGGCAAGACGACAACATTAAAGGGAAAACCTCTCAGTGCTTCAGTGACTGCTGGTAAAGCTT TTATGGTAGGAGAGGAAGGTTTTGTTCTTGATCCGCAGGTTCAGGCTATTTATCAGCATATTCAGTTTGATAAGGCTCGT GATATTGACGATTTTGAGATTGAATTGGGGAAATTGGATCAATGGACGATGCGTGTTGGTGGACGTTTAACAAAGACCTT TTCTGCAACCGATGAGCCACGTGTTGTTTCCTTGTATGGCAAGCTGCATCTTGCGCATAGTTTTGGAAAAAAGCAATCTG TGCATTTCAAAGATGCTTTCCAGTTGGGTGCTTTTGGTTCTTTTGTAGAAACTGGATTAGGTTTTAATGCTCGGTTGTCT TCAAACTTTACTCTTCACGGTGATCTGAGTTATCAGCAGAAGCTTACGAAGGCTGGTTTTTCTGGAACCAGTTTTTCGGG TGGAATGCGCTATCAGTTCTAG
Upstream 100 bases:
>100_bases GTAACACCTCTTTTGGGGTTATAGGGACTTATGAGAGACTTTCTTTGCAACCTTTAGAGGTTGAACAAAGCGCCAAAAAA GTGCCTTTGATAAATGGTCA
Downstream 100 bases:
>100_bases AATACAAGACAATCTGTATTTTGATATAGAAGGCAGCACAGTGTGATGCTTTATAATTTTTTTCTCTGTTGCTTTCTCTA AAGGGTTTTCCGTTTATTAA
Product: surface protein
Products: NA
Alternate protein names: Surface Protein; Outer Membrane Autotransporter; Inducible Autotransporter Protein B; Inducible Autotransporter Protein D; Inducible Bartonella Autotransporter C; Inducible Autotransporter Protein C; Inducible Bartonella Autotransporter E; Inducible Bartonella Autotransporter B; Inducible Autotransporter Protein A; Inducible Bartonella Autotransporter F; Inducible Autotransporter ProteinE; Inducible Bartonella Autotransporter A; Inducible Bartonella Autotransporter D
Number of amino acids: Translated: 193; Mature: 192
Protein sequence:
>193_residues MTAYGGLQCDTDFYLDGLLSYGLFKGDVVTLARGKTTTLKGKPLSASVTAGKAFMVGEEGFVLDPQVQAIYQHIQFDKAR DIDDFEIELGKLDQWTMRVGGRLTKTFSATDEPRVVSLYGKLHLAHSFGKKQSVHFKDAFQLGAFGSFVETGLGFNARLS SNFTLHGDLSYQQKLTKAGFSGTSFSGGMRYQF
Sequences:
>Translated_193_residues MTAYGGLQCDTDFYLDGLLSYGLFKGDVVTLARGKTTTLKGKPLSASVTAGKAFMVGEEGFVLDPQVQAIYQHIQFDKAR DIDDFEIELGKLDQWTMRVGGRLTKTFSATDEPRVVSLYGKLHLAHSFGKKQSVHFKDAFQLGAFGSFVETGLGFNARLS SNFTLHGDLSYQQKLTKAGFSGTSFSGGMRYQF >Mature_192_residues TAYGGLQCDTDFYLDGLLSYGLFKGDVVTLARGKTTTLKGKPLSASVTAGKAFMVGEEGFVLDPQVQAIYQHIQFDKARD IDDFEIELGKLDQWTMRVGGRLTKTFSATDEPRVVSLYGKLHLAHSFGKKQSVHFKDAFQLGAFGSFVETGLGFNARLSS NFTLHGDLSYQQKLTKAGFSGTSFSGGMRYQF
Specific function: Unknown
COG id: COG3468
COG function: function code MU; Type V secretory pathway, adhesin AidA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21198; Mature: 21067
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAYGGLQCDTDFYLDGLLSYGLFKGDVVTLARGKTTTLKGKPLSASVTAGKAFMVGEEG CCCCCCCEECHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCEEEEECCEEEEECCCC FVLDPQVQAIYQHIQFDKARDIDDFEIELGKLDQWTMRVGGRLTKTFSATDEPRVVSLYG EEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEEEEEEE KLHLAHSFGKKQSVHFKDAFQLGAFGSFVETGLGFNARLSSNFTLHGDLSYQQKLTKAGF EEEEHHHCCCCCCCCHHHHHHHCCHHHHHHHCCCCCEEECCCEEEECCCHHHHHHHHCCC SGTSFSGGMRYQF CCCCCCCCEEECC >Mature Secondary Structure TAYGGLQCDTDFYLDGLLSYGLFKGDVVTLARGKTTTLKGKPLSASVTAGKAFMVGEEG CCCCCCEECHHHHHHHHHHHCCCCCCEEEEECCCEEEECCCCCEEEEECCEEEEECCCC FVLDPQVQAIYQHIQFDKARDIDDFEIELGKLDQWTMRVGGRLTKTFSATDEPRVVSLYG EEECHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHCCEEEEEECCCCCCEEEEEEE KLHLAHSFGKKQSVHFKDAFQLGAFGSFVETGLGFNARLSSNFTLHGDLSYQQKLTKAGF EEEEHHHCCCCCCCCHHHHHHHCCHHHHHHHCCCCCEEECCCEEEECCCHHHHHHHHCCC SGTSFSGGMRYQF CCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA