| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475907
Identifier: 49475907
GI number: 49475907
Start: 1315040
End: 1316482
Strand: Reverse
Name: 49475907
Synonym: BH11840
Alternate gene names: NA
Gene position: 1316482-1315040 (Counterclockwise)
Preceding gene: 49475910
Following gene: 49475902
Centisome position: 68.17
GC content: 42.55
Gene sequence:
>1443_bases ATGCCGGCATTTGTTGATTTGGAAGAATTATTGGCGACACGTCTTCTTGTGCAGGGCAATTCTGGTTCTGGAAAATCACA TCTTTTGCGCCGTCTTCTTGAACAAAGTTCTTCATGGGTACAACATTGTGTGATCGATCCAGAGGGTGATTTCGTCACTT TGGCAGATAAATTTGGACATGTCATTGTTGAAGCGCAACGAAGCGAACAAGAGTTAATGCGTATTGCTTACAGGATTCGC CAACATCGGGTTTCAGTGGTGTTGAATCTTGAAGGTTTGGATACTGAACAACAGATGCGCGCTGTGGGTACCTTTCTTGG TGCACTGTTTGATGTGGAACGTGATTATTGGTATCCCATGCTTGTTGTTGTCGATGAAGCACAATTATTTGCTCCAGCTG TGGCGGGAGAAGTTTCTGATGAAGCGCGTAAAATTTCCCTTAGTGCTATGACCAATCTTATGTGTCGAGGGCGCAAACGT GGTCTTGCTGGTGTCATTGCTACACAGCGTTTGGCTAAGCTTGCCAAAAACGTTGCTGCTGAAGCGTCAAATTTTTTAAT AGGGCGAACTTTCTTAGATATTGATATGGTGCGCGCTGCTGATCTTTTGGGAATGGAGCGTCGCCAAGCCGAAATGTTTA GAGATCTTGAGCGTGGTCATTTTGTTGCTTTAGGGCCTGCTTTATCAAGGCGTTCTTTACGGATCATCATTGGTTCTGTT GAAACATTGGCACGTTCTTCTAGCCCAAAATTAATGCCACTTCCAAAAGAGCGAGTGGATGTAAAAGAACTTGTTTTTAC TGCTTCTCAAGAGGAAATTTTAATTCCCTTTAAACAATCACGAGAGCCGGTGAAAGAAAAATCGATTCATGCAATATTAG AAAAAGCTGTAAATAAAAAACGAGAATTGTTGGCAGAAAACTCGAGTTTATTTCCTGAACTTTCTGTTGTTGATCGTGAT CTCCAGGCAGAATGTATTATTCGGGAAATTCTTGAGGATCCTGAGGCTTTTTATCGTTCTACAGCTGTACTTTATCAAGA TTTCTTGGTGCGTTGCCGTATTCATGGTCTCTCAGGAGATTTTTTAAATCTTTCGCAATTTCGACGTAAATTGGCTATTG CTCAGGCTTGTGTAGATAAAGAAACCGCTGTCAGTGAAAACTGGAAGCGCATTTTGTATATCTCAGAAAGTTTGGAAGAT GATGTCCAAGGTGTTTTTTTGAATGTGGCTCAGGCCGCTTTGGGTGGGAAGCCGTGCCCATCAGATGCATTTTTAGCGCG TCTTTATGGTACGCATTCTTTAAGCCGTGCACGCCGACTTTTAACCTACTTTGAAGAGCGTGGACTCATCGTTATCCATA CGCATTTTAGCGGTCAACGCATTATAGCCTTTCCTGATCTTGGTGTAGAAACAGCACCAGGAGATCCTAAAGAACCAATT TAA
Upstream 100 bases:
>100_bases AAATCAATACGAGCCGGATTCAAAATCAAATAGTGGAGACGTTATGAAGGTGGAGATCGCCTTGGGTGAGATGGCAGAAG GTAATGCTTTGCGTAAATCA
Downstream 100 bases:
>100_bases CCGAATAAGCTGGAGACAGATTGCTCTGCTGCTGTTCTTGCGATTGCTTCTCCAATGAGGTCAGTAATTGGCAAAACACG GATATTATGGGCTTTCTCAA
Product: hypothetical protein
Products: NA
Alternate protein names: AAA ATPase; ATPase-Like Protein; GMP Reductase
Number of amino acids: Translated: 480; Mature: 479
Protein sequence:
>480_residues MPAFVDLEELLATRLLVQGNSGSGKSHLLRRLLEQSSSWVQHCVIDPEGDFVTLADKFGHVIVEAQRSEQELMRIAYRIR QHRVSVVLNLEGLDTEQQMRAVGTFLGALFDVERDYWYPMLVVVDEAQLFAPAVAGEVSDEARKISLSAMTNLMCRGRKR GLAGVIATQRLAKLAKNVAAEASNFLIGRTFLDIDMVRAADLLGMERRQAEMFRDLERGHFVALGPALSRRSLRIIIGSV ETLARSSSPKLMPLPKERVDVKELVFTASQEEILIPFKQSREPVKEKSIHAILEKAVNKKRELLAENSSLFPELSVVDRD LQAECIIREILEDPEAFYRSTAVLYQDFLVRCRIHGLSGDFLNLSQFRRKLAIAQACVDKETAVSENWKRILYISESLED DVQGVFLNVAQAALGGKPCPSDAFLARLYGTHSLSRARRLLTYFEERGLIVIHTHFSGQRIIAFPDLGVETAPGDPKEPI
Sequences:
>Translated_480_residues MPAFVDLEELLATRLLVQGNSGSGKSHLLRRLLEQSSSWVQHCVIDPEGDFVTLADKFGHVIVEAQRSEQELMRIAYRIR QHRVSVVLNLEGLDTEQQMRAVGTFLGALFDVERDYWYPMLVVVDEAQLFAPAVAGEVSDEARKISLSAMTNLMCRGRKR GLAGVIATQRLAKLAKNVAAEASNFLIGRTFLDIDMVRAADLLGMERRQAEMFRDLERGHFVALGPALSRRSLRIIIGSV ETLARSSSPKLMPLPKERVDVKELVFTASQEEILIPFKQSREPVKEKSIHAILEKAVNKKRELLAENSSLFPELSVVDRD LQAECIIREILEDPEAFYRSTAVLYQDFLVRCRIHGLSGDFLNLSQFRRKLAIAQACVDKETAVSENWKRILYISESLED DVQGVFLNVAQAALGGKPCPSDAFLARLYGTHSLSRARRLLTYFEERGLIVIHTHFSGQRIIAFPDLGVETAPGDPKEPI >Mature_479_residues PAFVDLEELLATRLLVQGNSGSGKSHLLRRLLEQSSSWVQHCVIDPEGDFVTLADKFGHVIVEAQRSEQELMRIAYRIRQ HRVSVVLNLEGLDTEQQMRAVGTFLGALFDVERDYWYPMLVVVDEAQLFAPAVAGEVSDEARKISLSAMTNLMCRGRKRG LAGVIATQRLAKLAKNVAAEASNFLIGRTFLDIDMVRAADLLGMERRQAEMFRDLERGHFVALGPALSRRSLRIIIGSVE TLARSSSPKLMPLPKERVDVKELVFTASQEEILIPFKQSREPVKEKSIHAILEKAVNKKRELLAENSSLFPELSVVDRDL QAECIIREILEDPEAFYRSTAVLYQDFLVRCRIHGLSGDFLNLSQFRRKLAIAQACVDKETAVSENWKRILYISESLEDD VQGVFLNVAQAALGGKPCPSDAFLARLYGTHSLSRARRLLTYFEERGLIVIHTHFSGQRIIAFPDLGVETAPGDPKEPI
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53868; Mature: 53737
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAFVDLEELLATRLLVQGNSGSGKSHLLRRLLEQSSSWVQHCVIDPEGDFVTLADKFGH CCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHCC VIVEAQRSEQELMRIAYRIRQHRVSVVLNLEGLDTEQQMRAVGTFLGALFDVERDYWYPM EEEEECCCHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEE LVVVDEAQLFAPAVAGEVSDEARKISLSAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAA EEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EASNFLIGRTFLDIDMVRAADLLGMERRQAEMFRDLERGHFVALGPALSRRSLRIIIGSV HHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECH ETLARSSSPKLMPLPKERVDVKELVFTASQEEILIPFKQSREPVKEKSIHAILEKAVNKK HHHHCCCCCCCCCCCHHHCCHHHHHHHCCCCCEEECCHHCCCCHHHHHHHHHHHHHHHHH RELLAENSSLFPELSVVDRDLQAECIIREILEDPEAFYRSTAVLYQDFLVRCRIHGLSGD HHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCC FLNLSQFRRKLAIAQACVDKETAVSENWKRILYISESLEDDVQGVFLNVAQAALGGKPCP CCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC SDAFLARLYGTHSLSRARRLLTYFEERGLIVIHTHFSGQRIIAFPDLGVETAPGDPKEPI HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC >Mature Secondary Structure PAFVDLEELLATRLLVQGNSGSGKSHLLRRLLEQSSSWVQHCVIDPEGDFVTLADKFGH CCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCCCEEEEEHHHCC VIVEAQRSEQELMRIAYRIRQHRVSVVLNLEGLDTEQQMRAVGTFLGALFDVERDYWYPM EEEEECCCHHHHHHHHHHHHHCEEEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCEE LVVVDEAQLFAPAVAGEVSDEARKISLSAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAA EEEEECHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHH EASNFLIGRTFLDIDMVRAADLLGMERRQAEMFRDLERGHFVALGPALSRRSLRIIIGSV HHHCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEEEECH ETLARSSSPKLMPLPKERVDVKELVFTASQEEILIPFKQSREPVKEKSIHAILEKAVNKK HHHHCCCCCCCCCCCHHHCCHHHHHHHCCCCCEEECCHHCCCCHHHHHHHHHHHHHHHHH RELLAENSSLFPELSVVDRDLQAECIIREILEDPEAFYRSTAVLYQDFLVRCRIHGLSGD HHHHHCCCCCCCCHHHHCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHEECCCCC FLNLSQFRRKLAIAQACVDKETAVSENWKRILYISESLEDDVQGVFLNVAQAALGGKPCP CCCHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCCCCC SDAFLARLYGTHSLSRARRLLTYFEERGLIVIHTHFSGQRIIAFPDLGVETAPGDPKEPI HHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCEEEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA