| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is tgt [H]
Identifier: 49475752
GI number: 49475752
Start: 1116640
End: 1117758
Strand: Reverse
Name: tgt [H]
Synonym: BH10080
Alternate gene names: 49475752
Gene position: 1117758-1116640 (Counterclockwise)
Preceding gene: 49475753
Following gene: 49475751
Centisome position: 57.88
GC content: 42.27
Gene sequence:
>1119_bases ATGATAAAGACATTTCATTATAGAAAAATTGCTCAAGATGGGTCTGCACGTCGAGGCGAAATTATAACGGGACGTGGGTG TATTCGTACACCGGCATTTATGCCTGTTGGAACGGCTGGAACCGTTAAAGCTATGTATATGGATCAAATACGTGCTCTTG GAGCAGATATCATTTTGGGTAATACTTATCATTTAATGCTGCGTCCAGGAGCTGAGTGTGTTGCGCGTTTAGGGGGCTTA CATCATTTTTCACGTTGGCATGGACCTATTTTAACGGATTCTGGTGGATTTCAGGTTATGTCGCTGGCGGGAATCCGTAA AATTACCGAACAAAGCGTGATTTTTCGCTCTTATATTAATGGAGCGTATTATGAAATGAGTCCAGAGCGTTCTATTGAGA TTCAAGGGCTTCTTAACTCTGATATACAGATGCAGCTAGATCAATGTATTGCATTACCTGCAAGTGAAAAAGAAGTAGAA TCTGCTATGGAACTTTCATTGCGGTGGGCGCAGCGTTGTAAAACAGCTTTTGGTGATCAGCCAGATAAAGCATTGTTTGG TATTGTTCAAGGCGGTGATAATATGAAAATGCGTGAACGGTCTGCCCAAGCATTGAAAGAGATGGGTTTAAAAGGCTATG CTATTGGAGGGTTGGCAGTTGGTGAACCGCAGAATGTTATGACAGCTGTATTGGATGTTACTTGTCCAATTTTGCCAGAG GATAAGCCACGTTATCTCATGGGGGTTGGTACACCTGATGATATTTTACAAAGTGTTGCTCGTGGTATTGATATGTTTGA TTGTGTTATGCCGACACGTGCAGGGCGCCATGGTTTAGCTTTTACGCGCTTTGGGAGAATTAATTTGCGCAATGCGCGTT ATGCAGAGGACCCACATCCTCTTGATCCGCAGTCACTTTGTCCTGCGGCAAATGATTATAGTTGTGCTTATTTGCATCAT TTGATTAGATCTGGCGAATCTCTTGGTGGTATGTTGTTAACTTGGAATAATCTTTTTTACTATCAGCAGCTTATGCAAGG AATTCGTGATGCCATTGAAGAAGGATGTTATGCTGATTTTTGTGCTGAAACCCGTGCTTTATGGACGAAAGGACGATAA
Upstream 100 bases:
>100_bases AAAGAATCAATCCATAAAGTTTATGCTGTTGCTGGTAAGAGAGGTATAGCTTTTCTTTCTTATAACAATATGGATTTATG GAAGCGAAAAGACGAGAGTG
Downstream 100 bases:
>100_bases GACGTTGATCCTAATGCATGGCGTCTGTTTTTTTCATGTTGTTTTTTTATTTTTGCATTAAAGAGTTTTGCTAAAATTAT GAAGTGGGAAATGCTTTTCA
Product: queuine tRNA-ribosyltransferase
Products: NA
Alternate protein names: Guanine insertion enzyme; tRNA-guanine transglycosylase [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MIKTFHYRKIAQDGSARRGEIITGRGCIRTPAFMPVGTAGTVKAMYMDQIRALGADIILGNTYHLMLRPGAECVARLGGL HHFSRWHGPILTDSGGFQVMSLAGIRKITEQSVIFRSYINGAYYEMSPERSIEIQGLLNSDIQMQLDQCIALPASEKEVE SAMELSLRWAQRCKTAFGDQPDKALFGIVQGGDNMKMRERSAQALKEMGLKGYAIGGLAVGEPQNVMTAVLDVTCPILPE DKPRYLMGVGTPDDILQSVARGIDMFDCVMPTRAGRHGLAFTRFGRINLRNARYAEDPHPLDPQSLCPAANDYSCAYLHH LIRSGESLGGMLLTWNNLFYYQQLMQGIRDAIEEGCYADFCAETRALWTKGR
Sequences:
>Translated_372_residues MIKTFHYRKIAQDGSARRGEIITGRGCIRTPAFMPVGTAGTVKAMYMDQIRALGADIILGNTYHLMLRPGAECVARLGGL HHFSRWHGPILTDSGGFQVMSLAGIRKITEQSVIFRSYINGAYYEMSPERSIEIQGLLNSDIQMQLDQCIALPASEKEVE SAMELSLRWAQRCKTAFGDQPDKALFGIVQGGDNMKMRERSAQALKEMGLKGYAIGGLAVGEPQNVMTAVLDVTCPILPE DKPRYLMGVGTPDDILQSVARGIDMFDCVMPTRAGRHGLAFTRFGRINLRNARYAEDPHPLDPQSLCPAANDYSCAYLHH LIRSGESLGGMLLTWNNLFYYQQLMQGIRDAIEEGCYADFCAETRALWTKGR >Mature_372_residues MIKTFHYRKIAQDGSARRGEIITGRGCIRTPAFMPVGTAGTVKAMYMDQIRALGADIILGNTYHLMLRPGAECVARLGGL HHFSRWHGPILTDSGGFQVMSLAGIRKITEQSVIFRSYINGAYYEMSPERSIEIQGLLNSDIQMQLDQCIALPASEKEVE SAMELSLRWAQRCKTAFGDQPDKALFGIVQGGDNMKMRERSAQALKEMGLKGYAIGGLAVGEPQNVMTAVLDVTCPILPE DKPRYLMGVGTPDDILQSVARGIDMFDCVMPTRAGRHGLAFTRFGRINLRNARYAEDPHPLDPQSLCPAANDYSCAYLHH LIRSGESLGGMLLTWNNLFYYQQLMQGIRDAIEEGCYADFCAETRALWTKGR
Specific function: Exchanges the guanine residue with 7-aminomethyl-7- deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). After this exchange, a cyclopentendiol moiety is attached to the 7-aminomethyl group of 7-deazaguanine, resulting in the hyper
COG id: COG0343
COG function: function code J; Queuine/archaeosine tRNA-ribosyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the queuine tRNA-ribosyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI13654276, Length=346, Percent_Identity=43.6416184971098, Blast_Score=287, Evalue=9e-78, Organism=Homo sapiens, GI13375872, Length=278, Percent_Identity=26.2589928057554, Blast_Score=93, Evalue=4e-19, Organism=Escherichia coli, GI1786607, Length=352, Percent_Identity=53.9772727272727, Blast_Score=374, Evalue=1e-105, Organism=Caenorhabditis elegans, GI17544680, Length=358, Percent_Identity=40.5027932960894, Blast_Score=263, Evalue=2e-70, Organism=Drosophila melanogaster, GI19920510, Length=367, Percent_Identity=43.0517711171662, Blast_Score=298, Evalue=4e-81, Organism=Drosophila melanogaster, GI21355311, Length=247, Percent_Identity=26.3157894736842, Blast_Score=76, Evalue=5e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004803 - InterPro: IPR002616 [H]
Pfam domain/function: PF01702 TGT [H]
EC number: =2.4.2.29 [H]
Molecular weight: Translated: 41254; Mature: 41254
Theoretical pI: Translated: 7.70; Mature: 7.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKTFHYRKIAQDGSARRGEIITGRGCIRTPAFMPVGTAGTVKAMYMDQIRALGADIILG CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC NTYHLMLRPGAECVARLGGLHHFSRWHGPILTDSGGFQVMSLAGIRKITEQSVIFRSYIN CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHC GAYYEMSPERSIEIQGLLNSDIQMQLDQCIALPASEKEVESAMELSLRWAQRCKTAFGDQ CCEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PDKALFGIVQGGDNMKMRERSAQALKEMGLKGYAIGGLAVGEPQNVMTAVLDVTCPILPE CCHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCEECCCCHHHHHHHHHHHCCCCCC DKPRYLMGVGTPDDILQSVARGIDMFDCVMPTRAGRHGLAFTRFGRINLRNARYAEDPHP CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCC LDPQSLCPAANDYSCAYLHHLIRSGESLGGMLLTWNNLFYYQQLMQGIRDAIEEGCYADF CCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHH CAETRALWTKGR HHHHHHHHCCCC >Mature Secondary Structure MIKTFHYRKIAQDGSARRGEIITGRGCIRTPAFMPVGTAGTVKAMYMDQIRALGADIILG CCCCCHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEC NTYHLMLRPGAECVARLGGLHHFSRWHGPILTDSGGFQVMSLAGIRKITEQSVIFRSYIN CEEEEEECCCHHHHHHHHHHHHHHHHCCCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHC GAYYEMSPERSIEIQGLLNSDIQMQLDQCIALPASEKEVESAMELSLRWAQRCKTAFGDQ CCEEEECCCCCEEEEEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC PDKALFGIVQGGDNMKMRERSAQALKEMGLKGYAIGGLAVGEPQNVMTAVLDVTCPILPE CCHHEEEEEECCCCCHHHHHHHHHHHHCCCCCEEECCEECCCCHHHHHHHHHHHCCCCCC DKPRYLMGVGTPDDILQSVARGIDMFDCVMPTRAGRHGLAFTRFGRINLRNARYAEDPHP CCCCEEEECCCHHHHHHHHHCCCCHHHHHCCCCCCCCCCEEEEECCEEECCCCCCCCCCC LDPQSLCPAANDYSCAYLHHLIRSGESLGGMLLTWNNLFYYQQLMQGIRDAIEEGCYADF CCHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHHH CAETRALWTKGR HHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]