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The map label for this gene is ydhP [H]

Identifier: 49475751

GI number: 49475751

Start: 1114653

End: 1115843

Strand: Reverse

Name: ydhP [H]

Synonym: BH10070

Alternate gene names: 49475751

Gene position: 1115843-1114653 (Counterclockwise)

Preceding gene: 49475752

Following gene: 49475748

Centisome position: 57.78

GC content: 39.97

Gene sequence:

>1191_bases
ATGAAGTTTTCTCATAAACAAAACGTTCTTGCATCGGAGATTGATGTGAGAACACGGCGTTTGGCAATTTTAGCTCTTGC
GGTGGGAAGTTTTGCTATTGGTACGGCAGAGTTTGTTGCAATGGGGCTACAGCCGGAGATGGCACGAAATTCATCTGTTG
ATATTCCTACAGCGGGTCAATATATTTCTGCTTATGCATTGGGGGTTGTGATTGGAGCCCCTGTTTTGGCTGTTGCGACA
GCTCCGTTCTCACGCAAAACTGCTTTAATAGGATTGATGTTTTTTTATGCGCTGGCAAATATTGCCACTGCTTTTTTTTC
TGATTTTAGCATATTAGGAACATTGCGCTTTCTTAGTGGTCTTCCCCATGGCATCTATTTTGGTCTTGCGACTCTGGTGG
CAGCTTCAATGGTGGAAATGAATGAACGCTCCAAAGCTGTTGGGTCTGTTATGCTTGGTTTAACAATAGCAACTGTTTTG
GGGGCACCAGGTGCAACTTGGATTGGACAGATTGTTGGTTGGCAGATTGCTTTTATTCTTGTAGGTGCTCTTTCTTTATT
GTGTTGTTTACTGATTGGGGTGTTCTTACCTGCTGTTTTAAATGCTCAAAAAACAAGTCCTCTACGCGAACTTTGTGTAT
TAAAGCAAAAGCAGGTGTGGTTTCTCTTGATGATGGTTTCGGTTGGAGCATCAGGATTATTTTCTGTTTTTACTTATATT
AAGTCAACATTAATGCATATTTCCGGTGTTTCGCTTGATTGGGTACCATTTATTATGCCGTTAGTTGGATTGGGGATGGT
GGTAGGTAATCTTTTGGGACCTAAATTGGCAGTAAAAATTGGTATTTCACCATTGATATTTTTTTCTATGCTTTGGAGCA
CATTTGTTTTTTTCTTTTTATCTCATGCTCCATTAACCGCAGCATTAGGATGCTTTTTGGTTGGTACTTCTTTTGCAGCT
ATGCCTTCTATACAAACAAAAATCATGAATGTTGCTTTCCATGGACAGATTTTAGCGGGAGCATTGATGCAATCTGCTTT
TAATATTGCCAATGCTCTTGGAGCGGAATCTGGAGCATGGGTTTTGAAGTTGGGCTATAGTTATGAATACACTGCTGTTC
TGGGGGGTATTTTAACCCTCTGTGGATTATTAATTTTTTGCTTTTTATGGTATATGGAAAAGCGTAATTAA

Upstream 100 bases:

>100_bases
TTTTAACAAACTATTTGGCATAAGTGTAAGACATTTGTGAGTTTGTTTGTGCATAGCATGGATATTCATGCTTAAAGTAT
GATTATACAGAAGTGATTAT

Downstream 100 bases:

>100_bases
CATTTCTTTTTGTTCTTGAGAGAAAAAGATATTTTTTTGTCTTTTTAGTTTTTTGATTGTCCTGTTGGATTTTTAAATAG
GCTATAGGAAACCCGTAGGG

Product: transport transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 396

Protein sequence:

>396_residues
MKFSHKQNVLASEIDVRTRRLAILALAVGSFAIGTAEFVAMGLQPEMARNSSVDIPTAGQYISAYALGVVIGAPVLAVAT
APFSRKTALIGLMFFYALANIATAFFSDFSILGTLRFLSGLPHGIYFGLATLVAASMVEMNERSKAVGSVMLGLTIATVL
GAPGATWIGQIVGWQIAFILVGALSLLCCLLIGVFLPAVLNAQKTSPLRELCVLKQKQVWFLLMMVSVGASGLFSVFTYI
KSTLMHISGVSLDWVPFIMPLVGLGMVVGNLLGPKLAVKIGISPLIFFSMLWSTFVFFFLSHAPLTAALGCFLVGTSFAA
MPSIQTKIMNVAFHGQILAGALMQSAFNIANALGAESGAWVLKLGYSYEYTAVLGGILTLCGLLIFCFLWYMEKRN

Sequences:

>Translated_396_residues
MKFSHKQNVLASEIDVRTRRLAILALAVGSFAIGTAEFVAMGLQPEMARNSSVDIPTAGQYISAYALGVVIGAPVLAVAT
APFSRKTALIGLMFFYALANIATAFFSDFSILGTLRFLSGLPHGIYFGLATLVAASMVEMNERSKAVGSVMLGLTIATVL
GAPGATWIGQIVGWQIAFILVGALSLLCCLLIGVFLPAVLNAQKTSPLRELCVLKQKQVWFLLMMVSVGASGLFSVFTYI
KSTLMHISGVSLDWVPFIMPLVGLGMVVGNLLGPKLAVKIGISPLIFFSMLWSTFVFFFLSHAPLTAALGCFLVGTSFAA
MPSIQTKIMNVAFHGQILAGALMQSAFNIANALGAESGAWVLKLGYSYEYTAVLGGILTLCGLLIFCFLWYMEKRN
>Mature_396_residues
MKFSHKQNVLASEIDVRTRRLAILALAVGSFAIGTAEFVAMGLQPEMARNSSVDIPTAGQYISAYALGVVIGAPVLAVAT
APFSRKTALIGLMFFYALANIATAFFSDFSILGTLRFLSGLPHGIYFGLATLVAASMVEMNERSKAVGSVMLGLTIATVL
GAPGATWIGQIVGWQIAFILVGALSLLCCLLIGVFLPAVLNAQKTSPLRELCVLKQKQVWFLLMMVSVGASGLFSVFTYI
KSTLMHISGVSLDWVPFIMPLVGLGMVVGNLLGPKLAVKIGISPLIFFSMLWSTFVFFFLSHAPLTAALGCFLVGTSFAA
MPSIQTKIMNVAFHGQILAGALMQSAFNIANALGAESGAWVLKLGYSYEYTAVLGGILTLCGLLIFCFLWYMEKRN

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=377, Percent_Identity=36.0742705570292, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1786595, Length=368, Percent_Identity=32.6086956521739, Blast_Score=178, Evalue=6e-46,
Organism=Escherichia coli, GI1787808, Length=245, Percent_Identity=24.4897959183673, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI145693198, Length=333, Percent_Identity=21.9219219219219, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42273; Mature: 42273

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSHKQNVLASEIDVRTRRLAILALAVGSFAIGTAEFVAMGLQPEMARNSSVDIPTAGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHH
YISAYALGVVIGAPVLAVATAPFSRKTALIGLMFFYALANIATAFFSDFSILGTLRFLSG
HHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPHGIYFGLATLVAASMVEMNERSKAVGSVMLGLTIATVLGAPGATWIGQIVGWQIAFIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VGALSLLCCLLIGVFLPAVLNAQKTSPLRELCVLKQKQVWFLLMMVSVGASGLFSVFTYI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KSTLMHISGVSLDWVPFIMPLVGLGMVVGNLLGPKLAVKIGISPLIFFSMLWSTFVFFFL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHHHHHHH
SHAPLTAALGCFLVGTSFAAMPSIQTKIMNVAFHGQILAGALMQSAFNIANALGAESGAW
HCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VLKLGYSYEYTAVLGGILTLCGLLIFCFLWYMEKRN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFSHKQNVLASEIDVRTRRLAILALAVGSFAIGTAEFVAMGLQPEMARNSSVDIPTAGQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHH
YISAYALGVVIGAPVLAVATAPFSRKTALIGLMFFYALANIATAFFSDFSILGTLRFLSG
HHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LPHGIYFGLATLVAASMVEMNERSKAVGSVMLGLTIATVLGAPGATWIGQIVGWQIAFIL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
VGALSLLCCLLIGVFLPAVLNAQKTSPLRELCVLKQKQVWFLLMMVSVGASGLFSVFTYI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
KSTLMHISGVSLDWVPFIMPLVGLGMVVGNLLGPKLAVKIGISPLIFFSMLWSTFVFFFL
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHEEEECCHHHHHHHHHHHHHHHHHH
SHAPLTAALGCFLVGTSFAAMPSIQTKIMNVAFHGQILAGALMQSAFNIANALGAESGAW
HCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCE
VLKLGYSYEYTAVLGGILTLCGLLIFCFLWYMEKRN
EEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]