| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is 49475682
Identifier: 49475682
GI number: 49475682
Start: 1023296
End: 1025224
Strand: Reverse
Name: 49475682
Synonym: BH09250
Alternate gene names: NA
Gene position: 1025224-1023296 (Counterclockwise)
Preceding gene: 49475683
Following gene: 49475681
Centisome position: 53.09
GC content: 43.6
Gene sequence:
>1929_bases ATGCCATTACCCTATCACACGCATATATTTAAGCTTGAACCAGCAACAAAGGAAGAAGTCAAAGAAGGTGTTTTAGATAG TAAAGCTCTTGCACCCATTTCAGTGGGCAGTGCAGCAGCTTATGAGGTAGAATATTTCGCAACCGCTGCTCAAGGAAAGA AAGCTGATGATGCGGTTGCAAAGAGAGATATTGGTAAACTTGCCTACAAAGATAAGATCACTGTTAACGATATTAAAGCA AGTGGGCAAGCCCATGAGAATACGATTTTATCAGGGGATGGTTGGATACAAATATCACCTTTAGGAATTGGTGATATGAG TGCGGTTACATATGATCCCGATAATGTGAGATCAAATGTGTTTTCCATGGAAAATATGCATGAGGGTCCTACCAAAAAGA TTTTGACTGAAGAAGAAAGATCAAAGCTTCGGTGGCTAAGTTCTACCCAGCCAACAATAGAAAAATGGTATAAAGGAAGT GAAGGTGTTTATTATCCTATATCTCCGGTAGATCTCAAAAATACCATCAGTTATTTTGCCATATCAAAGTCTTTTGGTAT GTTAAAATCAGTCTATGATCCAGATAAAATAGCAAAAGATGCATTTGATATGGAGAATATGAAAGAGGGGAATGAGCACC TTATTTTAACCCCTCAAGAACGTGCACAGATTGCAAAAATTGATAAAATTGAAAATGATGTGCAACATGCACAGGAAAGT GCACAACAAGGGACACATACAGCAACTAAAGCAAAAGAGGCAGCAGAGAGTGTATTAGATACGGCGAGTGTTGCACAAAA AAATGCTACGGATGCAAAAGCTATTGCTACCACTGCACAAACAGCAGCTAATAAAGCGCAAGATGTAGCGCACAGTGTAG AGAAAAAAGTTGATCTCATTCAACCTCTTGCAAAACAAGACTGGATTGATGGAACAAAAACAATAGACGCACTTATCTCA CCAGCCAACCTCATGGCTTCAATCAAAGCCAATAGCCTAAATGATAATGGTAGCAATGATAGTGGATATAGAAAACCTGT TGAAATCCTTATAACAGAAAGTGGAGACATTCCTTGGCCAGAAGGTGTTACTGATGAGACAGAACTTGAGATATGGGCTT GGGGTGGCGGCGATGCTGGGAGGGATAGTCTTTATGGTGGCACTGGCGGCGAAGGTGGTTTTGGTGGTTGTTGTACGTAC GTAAGAACAAGGAAAAAATTTCTTGGAAAGAATTCGGTCAAGATTGGAAAAGGCGGAAAGAGTCGTAATAATCCTGGAGG CGACCGCACAGTAGTTGGTCAATTTATTATAGCTTTTGGTGGAAATAACTCAATTAAACCTTATCAAAAAGGCGTGTTTA AAGGTGAGGATGCTACAGGCAAAGATGGCGATTATAATGGTAAAGATGGCTTTCTTGGTGGTGGTGGTGGCCAGGGTGCT GGCGGCACTGGCGGCGAAGGTGGTCGTGGTGGTCGTGGTGGTGATAATTTTTTATCCGATGGTGGTTGGGGTGGTTGGGG CGGTTGGAGCAACACTGGCTGTAAAGGTGGTAGAGGTGGTGATGGTGGGAGTAGTGTTTATGGTTTAGGGGGTAAAGGTG GTGATGGTGGGAGTAGTGTTTATGGCGGTGGTGGTGGTGGCGGCACTGGCGGTGAAGGTCGTGGTAGCACTAGCGGTAAA GGCGGTACAGGTGGGAGTAGTGTTTATGGTGGTGACGGTGGTGGTGACGGTAGTTATTATAATGGTAAAGTTGGTGATGG TGGCCATAGCATGTGGGGCGGTCATGGTGGTAAAGGCGCTTTAGTTCCTAAAGAGAGTAAGGTACTTTATGGCGGTGGTG GTGGCGGTTATTTTCCTGGAAAGGATGCAACGTCTTCCTCCAGTGGCGATGGTGGCGATGGCGCCGTATTAATCAAGGTA TATTTATAA
Upstream 100 bases:
>100_bases CGTATCGAGACCCTGCAAAAAAACCTTGATGCATTGCGCTTACAGGTCTCACTCTCCACACACAATCTCAAAAAATGAAC TGATTAAGGAATAAACTGCA
Downstream 100 bases:
>100_bases AATGGAATTGAACGATGGCACGAAAAATCAATAAAAATTGTCTCAATTATTTAAAGAAATGGGAAGGGCTACGGCTCCAT GCTTATAGAGATGCTTCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 642; Mature: 641
Protein sequence:
>642_residues MPLPYHTHIFKLEPATKEEVKEGVLDSKALAPISVGSAAAYEVEYFATAAQGKKADDAVAKRDIGKLAYKDKITVNDIKA SGQAHENTILSGDGWIQISPLGIGDMSAVTYDPDNVRSNVFSMENMHEGPTKKILTEEERSKLRWLSSTQPTIEKWYKGS EGVYYPISPVDLKNTISYFAISKSFGMLKSVYDPDKIAKDAFDMENMKEGNEHLILTPQERAQIAKIDKIENDVQHAQES AQQGTHTATKAKEAAESVLDTASVAQKNATDAKAIATTAQTAANKAQDVAHSVEKKVDLIQPLAKQDWIDGTKTIDALIS PANLMASIKANSLNDNGSNDSGYRKPVEILITESGDIPWPEGVTDETELEIWAWGGGDAGRDSLYGGTGGEGGFGGCCTY VRTRKKFLGKNSVKIGKGGKSRNNPGGDRTVVGQFIIAFGGNNSIKPYQKGVFKGEDATGKDGDYNGKDGFLGGGGGQGA GGTGGEGGRGGRGGDNFLSDGGWGGWGGWSNTGCKGGRGGDGGSSVYGLGGKGGDGGSSVYGGGGGGGTGGEGRGSTSGK GGTGGSSVYGGDGGGDGSYYNGKVGDGGHSMWGGHGGKGALVPKESKVLYGGGGGGYFPGKDATSSSSGDGGDGAVLIKV YL
Sequences:
>Translated_642_residues MPLPYHTHIFKLEPATKEEVKEGVLDSKALAPISVGSAAAYEVEYFATAAQGKKADDAVAKRDIGKLAYKDKITVNDIKA SGQAHENTILSGDGWIQISPLGIGDMSAVTYDPDNVRSNVFSMENMHEGPTKKILTEEERSKLRWLSSTQPTIEKWYKGS EGVYYPISPVDLKNTISYFAISKSFGMLKSVYDPDKIAKDAFDMENMKEGNEHLILTPQERAQIAKIDKIENDVQHAQES AQQGTHTATKAKEAAESVLDTASVAQKNATDAKAIATTAQTAANKAQDVAHSVEKKVDLIQPLAKQDWIDGTKTIDALIS PANLMASIKANSLNDNGSNDSGYRKPVEILITESGDIPWPEGVTDETELEIWAWGGGDAGRDSLYGGTGGEGGFGGCCTY VRTRKKFLGKNSVKIGKGGKSRNNPGGDRTVVGQFIIAFGGNNSIKPYQKGVFKGEDATGKDGDYNGKDGFLGGGGGQGA GGTGGEGGRGGRGGDNFLSDGGWGGWGGWSNTGCKGGRGGDGGSSVYGLGGKGGDGGSSVYGGGGGGGTGGEGRGSTSGK GGTGGSSVYGGDGGGDGSYYNGKVGDGGHSMWGGHGGKGALVPKESKVLYGGGGGGYFPGKDATSSSSGDGGDGAVLIKV YL >Mature_641_residues PLPYHTHIFKLEPATKEEVKEGVLDSKALAPISVGSAAAYEVEYFATAAQGKKADDAVAKRDIGKLAYKDKITVNDIKAS GQAHENTILSGDGWIQISPLGIGDMSAVTYDPDNVRSNVFSMENMHEGPTKKILTEEERSKLRWLSSTQPTIEKWYKGSE GVYYPISPVDLKNTISYFAISKSFGMLKSVYDPDKIAKDAFDMENMKEGNEHLILTPQERAQIAKIDKIENDVQHAQESA QQGTHTATKAKEAAESVLDTASVAQKNATDAKAIATTAQTAANKAQDVAHSVEKKVDLIQPLAKQDWIDGTKTIDALISP ANLMASIKANSLNDNGSNDSGYRKPVEILITESGDIPWPEGVTDETELEIWAWGGGDAGRDSLYGGTGGEGGFGGCCTYV RTRKKFLGKNSVKIGKGGKSRNNPGGDRTVVGQFIIAFGGNNSIKPYQKGVFKGEDATGKDGDYNGKDGFLGGGGGQGAG GTGGEGGRGGRGGDNFLSDGGWGGWGGWSNTGCKGGRGGDGGSSVYGLGGKGGDGGSSVYGGGGGGGTGGEGRGSTSGKG GTGGSSVYGGDGGGDGSYYNGKVGDGGHSMWGGHGGKGALVPKESKVLYGGGGGGYFPGKDATSSSSGDGGDGAVLIKVY L
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66192; Mature: 66060
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLPYHTHIFKLEPATKEEVKEGVLDSKALAPISVGSAAAYEVEYFATAAQGKKADDAVA CCCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEEEHHHCCCCCCHHHHH KRDIGKLAYKDKITVNDIKASGQAHENTILSGDGWIQISPLGIGDMSAVTYDPDNVRSNV HHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEECCHHHHHHH FSMENMHEGPTKKILTEEERSKLRWLSSTQPTIEKWYKGSEGVYYPISPVDLKNTISYFA HHHHHCCCCCCHHHHCHHHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHH ISKSFGMLKSVYDPDKIAKDAFDMENMKEGNEHLILTPQERAQIAKIDKIENDVQHAQES HHHHHHHHHHHCCHHHHHHHHHCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH AQQGTHTATKAKEAAESVLDTASVAQKNATDAKAIATTAQTAANKAQDVAHSVEKKVDLI HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QPLAKQDWIDGTKTIDALISPANLMASIKANSLNDNGSNDSGYRKPVEILITESGDIPWP HHHHHHHCCCCHHHHHHHHCCHHHHEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC EGVTDETELEIWAWGGGDAGRDSLYGGTGGEGGFGGCCTYVRTRKKFLGKNSVKIGKGGK CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC SRNNPGGDRTVVGQFIIAFGGNNSIKPYQKGVFKGEDATGKDGDYNGKDGFLGGGGGQGA CCCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGTGGEGGRGGRGGDNFLSDGGWGGWGGWSNTGCKGGRGGDGGSSVYGLGGKGGDGGSSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC YGGGGGGGTGGEGRGSTSGKGGTGGSSVYGGDGGGDGSYYNGKVGDGGHSMWGGHGGKGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LVPKESKVLYGGGGGGYFPGKDATSSSSGDGGDGAVLIKVYL CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC >Mature Secondary Structure PLPYHTHIFKLEPATKEEVKEGVLDSKALAPISVGSAAAYEVEYFATAAQGKKADDAVA CCCCCEEEEEECCCCHHHHHHHHCCCCCCCCEECCCCCEEEEEEEHHHCCCCCCHHHHH KRDIGKLAYKDKITVNDIKASGQAHENTILSGDGWIQISPLGIGDMSAVTYDPDNVRSNV HHHHHHHHHCCCEEEEECCCCCCCCCCEEECCCCEEEEEECCCCCCCEEEECCHHHHHHH FSMENMHEGPTKKILTEEERSKLRWLSSTQPTIEKWYKGSEGVYYPISPVDLKNTISYFA HHHHHCCCCCCHHHHCHHHHHHHHHHCCCCHHHHHHHCCCCCEEECCCCCCHHHHHHHHH ISKSFGMLKSVYDPDKIAKDAFDMENMKEGNEHLILTPQERAQIAKIDKIENDVQHAQES HHHHHHHHHHHCCHHHHHHHHHCHHHHCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHH AQQGTHTATKAKEAAESVLDTASVAQKNATDAKAIATTAQTAANKAQDVAHSVEKKVDLI HHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QPLAKQDWIDGTKTIDALISPANLMASIKANSLNDNGSNDSGYRKPVEILITESGDIPWP HHHHHHHCCCCHHHHHHHHCCHHHHEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCC EGVTDETELEIWAWGGGDAGRDSLYGGTGGEGGFGGCCTYVRTRKKFLGKNSVKIGKGGK CCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCC SRNNPGGDRTVVGQFIIAFGGNNSIKPYQKGVFKGEDATGKDGDYNGKDGFLGGGGGQGA CCCCCCCCCEEEEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGTGGEGGRGGRGGDNFLSDGGWGGWGGWSNTGCKGGRGGDGGSSVYGLGGKGGDGGSSV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC YGGGGGGGTGGEGRGSTSGKGGTGGSSVYGGDGGGDGSYYNGKVGDGGHSMWGGHGGKGA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC LVPKESKVLYGGGGGGYFPGKDATSSSSGDGGDGAVLIKVYL CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA