| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is yheS [H]
Identifier: 49475346
GI number: 49475346
Start: 647705
End: 649582
Strand: Reverse
Name: yheS [H]
Synonym: BH05520
Alternate gene names: 49475346
Gene position: 649582-647705 (Counterclockwise)
Preceding gene: 49475348
Following gene: 49475342
Centisome position: 33.64
GC content: 39.19
Gene sequence:
>1878_bases ATGTTAGTATTGAATGATATTACAATACGGATAGCTGGGCGTCTTTTAATTAGCCGTGCTAACATTGCTCTTCCTACTGG TTCAAAAACTGGATTTGTTGGCTATAATGGCACTGGAAAATCAACCCTTTTTCGCGCCATTACAGGTGAAATATCACCCG AAAACGGCGATATTATTATGCCCAAAAGTACAAAGATTGGTCACGTTGCTCAAGAGGCACCCGCAACCGAACACTCTTTG CTTGCAACTGTCTTAGCCGCCAACACAGAACACGCCAATCTTCTCCATGAAGCAGAAAGCGCAACTGATCCTCTGCGGAT TGCTGCCATTTATGCACGCTTAGCCGATATTGATGCCCATGCTGCAGAAGCACGCGCCGGAAAAATCCTCTCTGGTTTAG GATTTGATTCTCACACACAACAGCGACCTCTCTCATCCTTTTCCGGCGGATGGCGTATGCGAATTGCGCTAGCAGCTATA CTGTTTACTGAGCCTGATCTTTTACTGCTCGATGAACCAACAAATTATCTCGATATTGAAGGAACTCTCTGGCTCACTGA GTATGTGCGTCAATACCCCCATACAGTAATCATAATCAGTCATGATCGCGATTTTTTAAATAATACAGTTAATTCTATCA TGCATCTCGAAAATAACCAACTTACTTTTTGGCGTGGTAATTATGATCAATTTGAACAACAAAAAGCTGAAGTTGTTAAA GTACAACAAAAACAAATTGAAAAACAAGAAGTGCAACAAAAACATATGGAAGATTTTATTGTTCGTTTTCGTGCTAAAGC AAGTAAAGCGCGACAAGCGCAATCGCGCCTCAAAGCTCTCGAAAAGCTTAAGCCCCTTACAACGTGGAAAATTCAGCATG TTCAGCCTTTTATCTTTCCAAAAGTAGAAAAGCCTGTAGCTTCTCCTATTATTGCATTATCAAACGTAAGTGTTGGTTAT GAAACAGGAAAACCAATTTTAAAAGAATTAAATTTAAGAATTGATAATGATGACCGTATCACTCTCTTGGGCTCAAACGG AAACGGAAAATCAACTCTTGCTAAATTGCTCGCTGGCCGTCTGAAAGCGGAAAAAGGAACAATCACTCTTGCTCCACATC TGAAAATTGCTTTTTTTTCTCAACATCAACTTGATGATCTGAAACCGGAAGAAAATGCAATAGATCACATGCGTCATCTC ATGCCAGGAAAAGCAGACGCTAAAATACGCGCAGCAGTCGCTCGTATGGGAATATCAACGGAAAAAATGATGACAAAAGC CAAAGAGCTTTCAGGAGGTGAAAAAGTTCGCTTGCTTATGGGACTTACTGTTTTTGAAGGGCCCCATCTTCTTATTCTTG ATGAACCAACCAATCACCTTGACATTGATAGCCGTCAAGAACTGATACATGCACTCAATCATTTTAATGGAGCAGTAATA CTTATTGCTCATGACCGCCACCTTATCGAAGCAACAATGGATCGCTTATGGCTTGTGAAAAATAAAACTGTCCTTCCTTA TGAAGGTGACATGCATACTTACCGTAAAGAGATTCTTGGACTTTCATCCAAAAAAGAAACAAATGTATCCCTCAAAAAAC AACTTTCCCTTTCTAAAAATGATCAACGAAAAAGCAACGCTCAAAAACGTTCTAGTCTTGCTCCATTACGTAAGAAAATT GTAGAAACCGAAGCATTGATAGAGTACCTTCATAAACAAATTGCACAACTTGATGAAGAACTTATTTCTGCTTCTTTTCA TAACAAAATACCTGAAAAAATAAAAGAACGTGCCCAAAAGGCTAAAAAATTACAAGAAGCTGAAACACTCTGGTTTACGT TATCTGATCAATATGAAACACAAATGATGCAAAAATAA
Upstream 100 bases:
>100_bases GCCAACTTGCACCAAGAATAAAGATGATAACTACACACTCTCTTTAAAGATTAAATCCACTTGCGCTTATTTTAAAAATA TGCAAGGGAGATTTTTCATT
Downstream 100 bases:
>100_bases ACTCTTATCACTTCAAAATTTTGCTTGCTTGGGAACTCTAGGATAATAGCCATCCATAAGGCAAAAAATTCACGACTCGA CTAAAAATTACGCATCAAAT
Product: ABC transporter, ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 625
Protein sequence:
>625_residues MLVLNDITIRIAGRLLISRANIALPTGSKTGFVGYNGTGKSTLFRAITGEISPENGDIIMPKSTKIGHVAQEAPATEHSL LATVLAANTEHANLLHEAESATDPLRIAAIYARLADIDAHAAEARAGKILSGLGFDSHTQQRPLSSFSGGWRMRIALAAI LFTEPDLLLLDEPTNYLDIEGTLWLTEYVRQYPHTVIIISHDRDFLNNTVNSIMHLENNQLTFWRGNYDQFEQQKAEVVK VQQKQIEKQEVQQKHMEDFIVRFRAKASKARQAQSRLKALEKLKPLTTWKIQHVQPFIFPKVEKPVASPIIALSNVSVGY ETGKPILKELNLRIDNDDRITLLGSNGNGKSTLAKLLAGRLKAEKGTITLAPHLKIAFFSQHQLDDLKPEENAIDHMRHL MPGKADAKIRAAVARMGISTEKMMTKAKELSGGEKVRLLMGLTVFEGPHLLILDEPTNHLDIDSRQELIHALNHFNGAVI LIAHDRHLIEATMDRLWLVKNKTVLPYEGDMHTYRKEILGLSSKKETNVSLKKQLSLSKNDQRKSNAQKRSSLAPLRKKI VETEALIEYLHKQIAQLDEELISASFHNKIPEKIKERAQKAKKLQEAETLWFTLSDQYETQMMQK
Sequences:
>Translated_625_residues MLVLNDITIRIAGRLLISRANIALPTGSKTGFVGYNGTGKSTLFRAITGEISPENGDIIMPKSTKIGHVAQEAPATEHSL LATVLAANTEHANLLHEAESATDPLRIAAIYARLADIDAHAAEARAGKILSGLGFDSHTQQRPLSSFSGGWRMRIALAAI LFTEPDLLLLDEPTNYLDIEGTLWLTEYVRQYPHTVIIISHDRDFLNNTVNSIMHLENNQLTFWRGNYDQFEQQKAEVVK VQQKQIEKQEVQQKHMEDFIVRFRAKASKARQAQSRLKALEKLKPLTTWKIQHVQPFIFPKVEKPVASPIIALSNVSVGY ETGKPILKELNLRIDNDDRITLLGSNGNGKSTLAKLLAGRLKAEKGTITLAPHLKIAFFSQHQLDDLKPEENAIDHMRHL MPGKADAKIRAAVARMGISTEKMMTKAKELSGGEKVRLLMGLTVFEGPHLLILDEPTNHLDIDSRQELIHALNHFNGAVI LIAHDRHLIEATMDRLWLVKNKTVLPYEGDMHTYRKEILGLSSKKETNVSLKKQLSLSKNDQRKSNAQKRSSLAPLRKKI VETEALIEYLHKQIAQLDEELISASFHNKIPEKIKERAQKAKKLQEAETLWFTLSDQYETQMMQK >Mature_625_residues MLVLNDITIRIAGRLLISRANIALPTGSKTGFVGYNGTGKSTLFRAITGEISPENGDIIMPKSTKIGHVAQEAPATEHSL LATVLAANTEHANLLHEAESATDPLRIAAIYARLADIDAHAAEARAGKILSGLGFDSHTQQRPLSSFSGGWRMRIALAAI LFTEPDLLLLDEPTNYLDIEGTLWLTEYVRQYPHTVIIISHDRDFLNNTVNSIMHLENNQLTFWRGNYDQFEQQKAEVVK VQQKQIEKQEVQQKHMEDFIVRFRAKASKARQAQSRLKALEKLKPLTTWKIQHVQPFIFPKVEKPVASPIIALSNVSVGY ETGKPILKELNLRIDNDDRITLLGSNGNGKSTLAKLLAGRLKAEKGTITLAPHLKIAFFSQHQLDDLKPEENAIDHMRHL MPGKADAKIRAAVARMGISTEKMMTKAKELSGGEKVRLLMGLTVFEGPHLLILDEPTNHLDIDSRQELIHALNHFNGAVI LIAHDRHLIEATMDRLWLVKNKTVLPYEGDMHTYRKEILGLSSKKETNVSLKKQLSLSKNDQRKSNAQKRSSLAPLRKKI VETEALIEYLHKQIAQLDEELISASFHNKIPEKIKERAQKAKKLQEAETLWFTLSDQYETQMMQK
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=523, Percent_Identity=37.093690248566, Blast_Score=357, Evalue=2e-98, Organism=Homo sapiens, GI27881506, Length=523, Percent_Identity=35.9464627151052, Blast_Score=336, Evalue=4e-92, Organism=Homo sapiens, GI10947137, Length=523, Percent_Identity=35.9464627151052, Blast_Score=336, Evalue=5e-92, Organism=Homo sapiens, GI69354671, Length=546, Percent_Identity=35.3479853479854, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI10947135, Length=544, Percent_Identity=34.7426470588235, Blast_Score=287, Evalue=2e-77, Organism=Homo sapiens, GI31657092, Length=158, Percent_Identity=29.746835443038, Blast_Score=71, Evalue=3e-12, Organism=Homo sapiens, GI150417984, Length=207, Percent_Identity=27.536231884058, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1789751, Length=636, Percent_Identity=38.3647798742138, Blast_Score=458, Evalue=1e-130, Organism=Escherichia coli, GI1787041, Length=524, Percent_Identity=31.4885496183206, Blast_Score=306, Evalue=3e-84, Organism=Escherichia coli, GI1787182, Length=618, Percent_Identity=28.1553398058252, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI2367384, Length=545, Percent_Identity=28.9908256880734, Blast_Score=207, Evalue=2e-54, Organism=Escherichia coli, GI1788165, Length=197, Percent_Identity=28.9340101522843, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI145693107, Length=453, Percent_Identity=21.8543046357616, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1788506, Length=228, Percent_Identity=23.2456140350877, Blast_Score=66, Evalue=7e-12, Organism=Escherichia coli, GI1787370, Length=213, Percent_Identity=26.2910798122066, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI48994883, Length=213, Percent_Identity=26.2910798122066, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1787089, Length=257, Percent_Identity=25.2918287937743, Blast_Score=64, Evalue=2e-11, Organism=Escherichia coli, GI1786398, Length=212, Percent_Identity=25.4716981132075, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87081782, Length=243, Percent_Identity=28.3950617283951, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789891, Length=216, Percent_Identity=25, Blast_Score=63, Evalue=6e-11, Organism=Escherichia coli, GI87081834, Length=183, Percent_Identity=30.0546448087432, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17555318, Length=531, Percent_Identity=36.9114877589454, Blast_Score=356, Evalue=3e-98, Organism=Caenorhabditis elegans, GI17553372, Length=531, Percent_Identity=37.4764595103578, Blast_Score=352, Evalue=3e-97, Organism=Caenorhabditis elegans, GI17559834, Length=552, Percent_Identity=33.8768115942029, Blast_Score=314, Evalue=9e-86, Organism=Caenorhabditis elegans, GI71992285, Length=190, Percent_Identity=28.4210526315789, Blast_Score=73, Evalue=6e-13, Organism=Saccharomyces cerevisiae, GI6321121, Length=537, Percent_Identity=37.8026070763501, Blast_Score=387, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6320874, Length=530, Percent_Identity=32.4528301886792, Blast_Score=308, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6325030, Length=442, Percent_Identity=28.0542986425339, Blast_Score=151, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6323278, Length=387, Percent_Identity=26.8733850129199, Blast_Score=128, Evalue=3e-30, Organism=Saccharomyces cerevisiae, GI6324314, Length=386, Percent_Identity=25.6476683937824, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI24666836, Length=518, Percent_Identity=39.96138996139, Blast_Score=394, Evalue=1e-110, Organism=Drosophila melanogaster, GI24642252, Length=525, Percent_Identity=37.1428571428571, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI18859989, Length=525, Percent_Identity=37.1428571428571, Blast_Score=343, Evalue=1e-94, Organism=Drosophila melanogaster, GI24641342, Length=540, Percent_Identity=33.3333333333333, Blast_Score=315, Evalue=5e-86, Organism=Drosophila melanogaster, GI116007328, Length=242, Percent_Identity=26.8595041322314, Blast_Score=72, Evalue=2e-12, Organism=Drosophila melanogaster, GI28574150, Length=242, Percent_Identity=26.8595041322314, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI281363262, Length=250, Percent_Identity=26, Blast_Score=66, Evalue=8e-11, Organism=Drosophila melanogaster, GI24653245, Length=250, Percent_Identity=26, Blast_Score=66, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 70301; Mature: 70301
Theoretical pI: Translated: 9.84; Mature: 9.84
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVLNDITIRIAGRLLISRANIALPTGSKTGFVGYNGTGKSTLFRAITGEISPENGDIIM CEEEEEEEEEEHHHHHEEECCEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEE PKSTKIGHVAQEAPATEHSLLATVLAANTEHANLLHEAESATDPLRIAAIYARLADIDAH CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHH AAEARAGKILSGLGFDSHTQQRPLSSFSGGWRMRIALAAILFTEPDLLLLDEPTNYLDIE HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECC GTLWLTEYVRQYPHTVIIISHDRDFLNNTVNSIMHLENNQLTFWRGNYDQFEQQKAEVVK CEEHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHH VQQKQIEKQEVQQKHMEDFIVRFRAKASKARQAQSRLKALEKLKPLTTWKIQHVQPFIFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC KVEKPVASPIIALSNVSVGYETGKPILKELNLRIDNDDRITLLGSNGNGKSTLAKLLAGR CCCCCHHCCEEEEECCCCCCCCCCHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHHH LKAEKGTITLAPHLKIAFFSQHQLDDLKPEENAIDHMRHLMPGKADAKIRAAVARMGIST HCCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH EKMMTKAKELSGGEKVRLLMGLTVFEGPHLLILDEPTNHLDIDSRQELIHALNHFNGAVI HHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE LIAHDRHLIEATMDRLWLVKNKTVLPYEGDMHTYRKEILGLSSKKETNVSLKKQLSLSKN EEECCCHHHHHHHHHEEEEECCEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC DQRKSNAQKRSSLAPLRKKIVETEALIEYLHKQIAQLDEELISASFHNKIPEKIKERAQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AKKLQEAETLWFTLSDQYETQMMQK HHHHHHHHEEEEEECCHHHHHHHCC >Mature Secondary Structure MLVLNDITIRIAGRLLISRANIALPTGSKTGFVGYNGTGKSTLFRAITGEISPENGDIIM CEEEEEEEEEEHHHHHEEECCEEECCCCCCEEEEECCCCHHHHHHHHHCCCCCCCCCEEE PKSTKIGHVAQEAPATEHSLLATVLAANTEHANLLHEAESATDPLRIAAIYARLADIDAH CCCCCCCCHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCHHH AAEARAGKILSGLGFDSHTQQRPLSSFSGGWRMRIALAAILFTEPDLLLLDEPTNYLDIE HHHHHHHHHHHCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHHCCCCEEEEECCCCEEECC GTLWLTEYVRQYPHTVIIISHDRDFLNNTVNSIMHLENNQLTFWRGNYDQFEQQKAEVVK CEEHHHHHHHHCCCEEEEEECCHHHHHHHHHHHEEECCCEEEEEECCHHHHHHHHHHHHH VQQKQIEKQEVQQKHMEDFIVRFRAKASKARQAQSRLKALEKLKPLTTWKIQHVQPFIFP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCC KVEKPVASPIIALSNVSVGYETGKPILKELNLRIDNDDRITLLGSNGNGKSTLAKLLAGR CCCCCHHCCEEEEECCCCCCCCCCHHHHHCCCEECCCCEEEEEECCCCCHHHHHHHHHHH LKAEKGTITLAPHLKIAFFSQHQLDDLKPEENAIDHMRHLMPGKADAKIRAAVARMGIST HCCCCCEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCH EKMMTKAKELSGGEKVRLLMGLTVFEGPHLLILDEPTNHLDIDSRQELIHALNHFNGAVI HHHHHHHHHCCCCCEEEEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEE LIAHDRHLIEATMDRLWLVKNKTVLPYEGDMHTYRKEILGLSSKKETNVSLKKQLSLSKN EEECCCHHHHHHHHHEEEEECCEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHCCCCC DQRKSNAQKRSSLAPLRKKIVETEALIEYLHKQIAQLDEELISASFHNKIPEKIKERAQK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH AKKLQEAETLWFTLSDQYETQMMQK HHHHHHHHEEEEEECCHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]