Click here to switch to the map view.

The map label for this gene is 49475215

Identifier: 49475215

GI number: 49475215

Start: 479446

End: 481140

Strand: Reverse

Name: 49475215

Synonym: BH04170

Alternate gene names: NA

Gene position: 481140-479446 (Counterclockwise)

Preceding gene: 49475216

Following gene: 49475214

Centisome position: 24.92

GC content: 38.11

Gene sequence:

>1695_bases
ATGCGCAGTGTAACAGTATCCGGCTTTCTTACTCTCATTATCTCCGGTATTATGCTGATACCATCCCCCGCCTATAGCAA
AATCGATACTACTCTCAATACAAGCTCATTTATAGGCGCTTACCTGGCAGGGAGGGTCGCAAATCATGAGAACAAAACAG
ATCTTGCCATCAAATATTTTAAAAAGGCTCTTACTTATAAACCTGAAAATATTGAAACACAAGTAGAGATGCTTGAAGCG
ATGCTCTTTTCAGGTGCTTTTAAAGAAGCTGTTAAACAAGCCCAAAAATTGAAAAAGCAAGGCATTACGAATCCCTTTGT
CTCTTTGACGTTATCGATCGAAAGTCTCATCAAAAAAGACTACAACAAGGCCAAGATTCTTCTGCAATTAAAAACACTTC
CCGCTGCCAACAATCCAATACCTGAATTAATCGGTGCTTGGGCCACATTCGGATCTGGGTACCAATCTCAAGCAATTACT
CATCTTCAAAAAATCCAAGGACCTGCTTGGTATAAGCTTTTTATAAACTACCATCTTGCACTCATGTGCGATCTCGCAGG
ACATAAGCAGAATGCACAAAAATATTTCACTCAAGCGCTCAATACTCAACAAGCCACTCTTATAGCCCCTAATACTTATG
AACATATTATCATAGCCTATGCCTCATTCCAATTGCGCTCTAAAATGCGCATTCAAGCTCTTCAGACCCTCAAACACGGC
GAACAAATGCTGCCAGGACGAGAAATATTTAAAAATATTCGAGAAAAAATTGAAAAAGGTGCTTCTTTAGAAAGGCTCAT
TAAAACACCTCAGCAAGGAACTGGCGAAGTATTGTATAACTTTGGAACAACACTTAACCATAAAAACTCACAACGAATTG
CACGTATTTTCACACAGTTATCTTTAATCTTATCACCCGAAAATGACGCAATAATGTTTCACCTGGCAAATATCTCTGCC
AAAGTGAATGATCTCAATCAAGCCATTAAACTTTACCGCTCTTTACCACAAAGCTCGCCTTATTATAGGGTTGGACAATT
ACAGCTTGCTTTCATTCTTGCAAATAACAACAATCACAGTGAAGCTATCAAATTGCTCACTTCATTAAAGAAAAAAAATC
CCAATGATCGCCACATTTTGATAACACTTTCTGCACTTTATATGCAAGATAATAAATTTACCGAAGCTACCAAAACTCTG
GATCGTGCTATTGCACAAATAACAAATTTTCAACAAGATGATTGGAAGCTTTTTTATCAGCGTGGAATCGCCTTTGAACG
TTTACAGCAATGGTCAAAAGCAGAAAATGATCTGCGAAAAGCACTTGATTTTTTTCCCAACCAACCGCAAGTCCTTAATT
ATTTAGGCTATTCACTTGTTGAGCGTGGTGAAAAACTTGAAGAATCACTCCATATGCTGCAAAAAGCCTCTACGTTACAA
CCTCAAAATAGTCATATCCTTGATTCTCTAGGGTGGGCTTATTATAAGCTTAAGCAATATAATCAAGCTGTTCAAATATT
GGGAAATGCTGTCAGGTTACAACCTGAAGATCCAACATTGAATGATCATTTAGGCGATGTCTATTGGCGAGTTGGGCGTA
AACGTGAAGCAATGTTTCAATGGAATCACGCAATCGATGGGGAAGCAAAAAACTCCAAGGAAATCCAAGAAAAATTGAAA
TTTGGTTTGCAATAA

Upstream 100 bases:

>100_bases
GTAAACTGATTATTTGCAATAATTACAATATTTTTCAATAAAGTAACCGGATATGGTTTATAAGTACAGTCAATTGATTA
TCTTAAGAAGGATTAGCTCT

Downstream 100 bases:

>100_bases
ACAATGTTGCTTGACCACAACCACATGAAACAATAGACAGTCATAGAGGCTGAAATTTCTTTGGTCGCTATCTGTTGATC
AAACATTAAAGAGTATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 564

Protein sequence:

>564_residues
MRSVTVSGFLTLIISGIMLIPSPAYSKIDTTLNTSSFIGAYLAGRVANHENKTDLAIKYFKKALTYKPENIETQVEMLEA
MLFSGAFKEAVKQAQKLKKQGITNPFVSLTLSIESLIKKDYNKAKILLQLKTLPAANNPIPELIGAWATFGSGYQSQAIT
HLQKIQGPAWYKLFINYHLALMCDLAGHKQNAQKYFTQALNTQQATLIAPNTYEHIIIAYASFQLRSKMRIQALQTLKHG
EQMLPGREIFKNIREKIEKGASLERLIKTPQQGTGEVLYNFGTTLNHKNSQRIARIFTQLSLILSPENDAIMFHLANISA
KVNDLNQAIKLYRSLPQSSPYYRVGQLQLAFILANNNNHSEAIKLLTSLKKKNPNDRHILITLSALYMQDNKFTEATKTL
DRAIAQITNFQQDDWKLFYQRGIAFERLQQWSKAENDLRKALDFFPNQPQVLNYLGYSLVERGEKLEESLHMLQKASTLQ
PQNSHILDSLGWAYYKLKQYNQAVQILGNAVRLQPEDPTLNDHLGDVYWRVGRKREAMFQWNHAIDGEAKNSKEIQEKLK
FGLQ

Sequences:

>Translated_564_residues
MRSVTVSGFLTLIISGIMLIPSPAYSKIDTTLNTSSFIGAYLAGRVANHENKTDLAIKYFKKALTYKPENIETQVEMLEA
MLFSGAFKEAVKQAQKLKKQGITNPFVSLTLSIESLIKKDYNKAKILLQLKTLPAANNPIPELIGAWATFGSGYQSQAIT
HLQKIQGPAWYKLFINYHLALMCDLAGHKQNAQKYFTQALNTQQATLIAPNTYEHIIIAYASFQLRSKMRIQALQTLKHG
EQMLPGREIFKNIREKIEKGASLERLIKTPQQGTGEVLYNFGTTLNHKNSQRIARIFTQLSLILSPENDAIMFHLANISA
KVNDLNQAIKLYRSLPQSSPYYRVGQLQLAFILANNNNHSEAIKLLTSLKKKNPNDRHILITLSALYMQDNKFTEATKTL
DRAIAQITNFQQDDWKLFYQRGIAFERLQQWSKAENDLRKALDFFPNQPQVLNYLGYSLVERGEKLEESLHMLQKASTLQ
PQNSHILDSLGWAYYKLKQYNQAVQILGNAVRLQPEDPTLNDHLGDVYWRVGRKREAMFQWNHAIDGEAKNSKEIQEKLK
FGLQ
>Mature_564_residues
MRSVTVSGFLTLIISGIMLIPSPAYSKIDTTLNTSSFIGAYLAGRVANHENKTDLAIKYFKKALTYKPENIETQVEMLEA
MLFSGAFKEAVKQAQKLKKQGITNPFVSLTLSIESLIKKDYNKAKILLQLKTLPAANNPIPELIGAWATFGSGYQSQAIT
HLQKIQGPAWYKLFINYHLALMCDLAGHKQNAQKYFTQALNTQQATLIAPNTYEHIIIAYASFQLRSKMRIQALQTLKHG
EQMLPGREIFKNIREKIEKGASLERLIKTPQQGTGEVLYNFGTTLNHKNSQRIARIFTQLSLILSPENDAIMFHLANISA
KVNDLNQAIKLYRSLPQSSPYYRVGQLQLAFILANNNNHSEAIKLLTSLKKKNPNDRHILITLSALYMQDNKFTEATKTL
DRAIAQITNFQQDDWKLFYQRGIAFERLQQWSKAENDLRKALDFFPNQPQVLNYLGYSLVERGEKLEESLHMLQKASTLQ
PQNSHILDSLGWAYYKLKQYNQAVQILGNAVRLQPEDPTLNDHLGDVYWRVGRKREAMFQWNHAIDGEAKNSKEIQEKLK
FGLQ

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 TPR repeats [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6319387, Length=252, Percent_Identity=26.984126984127, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011717
- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR013105
- InterPro:   IPR019734 [H]

Pfam domain/function: PF07719 TPR_2; PF07721 TPR_4 [H]

EC number: NA

Molecular weight: Translated: 64282; Mature: 64282

Theoretical pI: Translated: 10.09; Mature: 10.09

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSVTVSGFLTLIISGIMLIPSPAYSKIDTTLNTSSFIGAYLAGRVANHENKTDLAIKYF
CCCEEHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
KKALTYKPENIETQVEMLEAMLFSGAFKEAVKQAQKLKKQGITNPFVSLTLSIESLIKKD
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
YNKAKILLQLKTLPAANNPIPELIGAWATFGSGYQSQAITHLQKIQGPAWYKLFINYHLA
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMCDLAGHKQNAQKYFTQALNTQQATLIAPNTYEHIIIAYASFQLRSKMRIQALQTLKHG
HHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
EQMLPGREIFKNIREKIEKGASLERLIKTPQQGTGEVLYNFGTTLNHKNSQRIARIFTQL
HHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHH
SLILSPENDAIMFHLANISAKVNDLNQAIKLYRSLPQSSPYYRVGQLQLAFILANNNNHS
HHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCCHH
EAIKLLTSLKKKNPNDRHILITLSALYMQDNKFTEATKTLDRAIAQITNFQQDDWKLFYQ
HHHHHHHHHHHCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RGIAFERLQQWSKAENDLRKALDFFPNQPQVLNYLGYSLVERGEKLEESLHMLQKASTLQ
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQNSHILDSLGWAYYKLKQYNQAVQILGNAVRLQPEDPTLNDHLGDVYWRVGRKREAMFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCHHHHHHHHHHCCHHHHHHH
WNHAIDGEAKNSKEIQEKLKFGLQ
HCCCCCCCCCCHHHHHHHHHCCCC
>Mature Secondary Structure
MRSVTVSGFLTLIISGIMLIPSPAYSKIDTTLNTSSFIGAYLAGRVANHENKTDLAIKYF
CCCEEHHHHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHH
KKALTYKPENIETQVEMLEAMLFSGAFKEAVKQAQKLKKQGITNPFVSLTLSIESLIKKD
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCC
YNKAKILLQLKTLPAANNPIPELIGAWATFGSGYQSQAITHLQKIQGPAWYKLFINYHLA
CCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHH
LMCDLAGHKQNAQKYFTQALNTQQATLIAPNTYEHIIIAYASFQLRSKMRIQALQTLKHG
HHHHHHCCCHHHHHHHHHHHCCCCEEEECCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH
EQMLPGREIFKNIREKIEKGASLERLIKTPQQGTGEVLYNFGTTLNHKNSQRIARIFTQL
HHCCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHH
SLILSPENDAIMFHLANISAKVNDLNQAIKLYRSLPQSSPYYRVGQLQLAFILANNNNHS
HHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCEEECCEEEEEEEECCCCHH
EAIKLLTSLKKKNPNDRHILITLSALYMQDNKFTEATKTLDRAIAQITNFQQDDWKLFYQ
HHHHHHHHHHHCCCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH
RGIAFERLQQWSKAENDLRKALDFFPNQPQVLNYLGYSLVERGEKLEESLHMLQKASTLQ
HCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PQNSHILDSLGWAYYKLKQYNQAVQILGNAVRLQPEDPTLNDHLGDVYWRVGRKREAMFQ
CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHEECCCCCCCCHHHHHHHHHHCCHHHHHHH
WNHAIDGEAKNSKEIQEKLKFGLQ
HCCCCCCCCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7883699; 10984043 [H]