Click here to switch to the map view.

The map label for this gene is gp25

Identifier: 49475121

GI number: 49475121

Start: 393772

End: 394101

Strand: Reverse

Name: gp25

Synonym: BH03180

Alternate gene names: NA

Gene position: 394101-393772 (Counterclockwise)

Preceding gene: 49475122

Following gene: 49475120

Centisome position: 20.41

GC content: 43.94

Gene sequence:

>330_bases
ATGGACCGCACAACAGGAAAGCCATTGGTTGGCATAGAGCATTTGCGGCAGTCGATTATTGATATCTTATCAACACGCAT
TGGCACACGGGTGATGCGACGTGATTATGGTTCACGCATTGCAGAACTCATTGATGCACCGGTTAACAGCAGCTTTTCTA
TTGCTCTTTATGCCGCCGTTGCTGAAGCTTTAGACAAGTGGGAACCACGTTTTAAGCTCAAAAAGATTGATTTTAAAATG
CTTGGAACCGGACAAGTTTCTCTGTCTTTTGAGGGCATGTATTTGCCATCAGGAAAGCCCATCACCATGGAAGGATTATT
GATACAATGA

Upstream 100 bases:

>100_bases
GTGATTTAAAGCATAATGGCACCAATATTGGAAACAGCCATGTTCATGGAGGTGTTTCCCCTGGTGGCTCCATGACAGGA
GGTCCAAATTGAACAGTGGA

Downstream 100 bases:

>100_bases
GTAGAGCGCTTGCAAAACCGGAAATTATTACAGAACTTTCTTTTGAGGAAATCCGCGCTGCTGTTCTGACCCATTTAAAA
GAGCTTTTACCTGAATATAC

Product: Phage protein gp25

Products: NA

Alternate protein names: Baseplate Assembly Protein W; Phage Baseplate Assembly Protein; GPW/Gp; Phage-Related Baseplate Assembly Protein; Baseplate Assembly Protein GpW; Pyocin R2_PP Baseplate Protein; Bacteriophage P2 Baseplate Assembly Protein GPW; Bacteriophage Baseplate Assembly Protein W; Phage Baseplate Assembly Protein W; Phage P2 Baseplate Assembly GpW-Like Protein; Phage Baseplate Assembly; GpW/GP25 Family Protein; Bacteriophage Protein; Phage P2 Baseplate Assembly W Protein; Phage-Related Baseplate Protein; Phage Protein Gp; Baseplate Assembly Protein; Prophage Baseplate Protein; Baseplate Assembly Protein W Prophage; Prophage LambdaW1 Baseplate Assembly Protein W

Number of amino acids: Translated: 109; Mature: 109

Protein sequence:

>109_residues
MDRTTGKPLVGIEHLRQSIIDILSTRIGTRVMRRDYGSRIAELIDAPVNSSFSIALYAAVAEALDKWEPRFKLKKIDFKM
LGTGQVSLSFEGMYLPSGKPITMEGLLIQ

Sequences:

>Translated_109_residues
MDRTTGKPLVGIEHLRQSIIDILSTRIGTRVMRRDYGSRIAELIDAPVNSSFSIALYAAVAEALDKWEPRFKLKKIDFKM
LGTGQVSLSFEGMYLPSGKPITMEGLLIQ
>Mature_109_residues
MDRTTGKPLVGIEHLRQSIIDILSTRIGTRVMRRDYGSRIAELIDAPVNSSFSIALYAAVAEALDKWEPRFKLKKIDFKM
LGTGQVSLSFEGMYLPSGKPITMEGLLIQ

Specific function: Unknown

COG id: COG3628

COG function: function code R; Phage baseplate assembly protein W

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12171; Mature: 12171

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRTTGKPLVGIEHLRQSIIDILSTRIGTRVMRRDYGSRIAELIDAPVNSSFSIALYAAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
AEALDKWEPRFKLKKIDFKMLGTGQVSLSFEGMYLPSGKPITMEGLLIQ
HHHHHCCCCCEEEEECCEEEECCCEEEEEECCEECCCCCCEEECCEEEC
>Mature Secondary Structure
MDRTTGKPLVGIEHLRQSIIDILSTRIGTRVMRRDYGSRIAELIDAPVNSSFSIALYAAV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
AEALDKWEPRFKLKKIDFKMLGTGQVSLSFEGMYLPSGKPITMEGLLIQ
HHHHHCCCCCEEEEECCEEEECCCEEEEEECCEECCCCCCEEECCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA