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The map label for this gene is rsmC [H]

Identifier: 49475021

GI number: 49475021

Start: 281934

End: 282965

Strand: Reverse

Name: rsmC [H]

Synonym: BH02090

Alternate gene names: 49475021

Gene position: 282965-281934 (Counterclockwise)

Preceding gene: 49475022

Following gene: 49475018

Centisome position: 14.65

GC content: 38.47

Gene sequence:

>1032_bases
TTGGAATGGCATTTTTCTCTAAAAGAGCCACATGTGTTATTATTTTTACCTTTTGAAAAGTATGCACTTCCCTATCCTGA
TCCAAGCCAATCTTGGTTAAGTTTTGGTTTAACGGAAATCCCTGTTCCAGAATGGACAAAAAACTTAGAAATTATAACGC
CTTGGCGACCAGATTTTTTAAAATTTGCTAACGCTCAATTTCGCTGTTCTCCTGAAATCAATCAAACTTGCACCCATGAT
GGTGCACTTTTGCAATTAAGCAAATATCGTGGTTTTAACCAAAATTGTTTTCTTGATTTACTAGAACGCGTTAAACCTGG
TGGATGGATCATTATCGGTGGAAATAAAACGAGTGGTGCTGACTCAATGATGAAATGGGTCAAAAAAATTGTACCCATCA
CCAATAAATTTTCCAAAAATCACGGTCTTGTCTTCTGGATTCAAGTTCCACAACAAATAGAAAAACAAAATACTGCACAA
TTGCGTTCACCACCGCTCACTTTTGAAAACAAATTTCAAACCACTTCTGGCATGTTCTCGCACGGTCGTATTGATCCAGG
ATCTGCTGTACTTGCTTCGCATATGTGCAAAACTATTTCTGGAAAAACTGCTGATTTTGGTGCTGGTTGGGGCTTCCTTT
CTCACGCTGCACTTGAAAGAAGTGAAAAACTCACTGCTCTTGATCTTTATGAAGCGGACTACAACGCTTTAAAAGCAGCC
AAACAGCACCTAAAACACATAACAACTTCTCTTCCAATCCATTTCTATTGGCATGATCTTGTGCATGAACCAATCACAAA
TCTCTATGATACAATCATTTCAAACCCACCGTTTCACACACAACAAACTACAGATGTCTCATTAGGACAGCATTTTATTA
TCAATGCTGCAAAATACCTAAAGCCCGGTGGTAATCTTCTTCTTGTTGCTAACCGCCACCTGCCTTATGAAACATTGTTA
AAGAGGCTTTTTCGCACGGTATTGATATATGAAAAAGCCCATGGCTTTAAAGTTATTGAAGCATACCGGTAG

Upstream 100 bases:

>100_bases
AATACACAGAGGAAACACATAAATCTGAAAACAAGCGCCGTCGTAAGAAAAAAGAAGAGTAAACTTCTCCTTTTTTCATG
AAATTAAATGCCATCCCAAA

Downstream 100 bases:

>100_bases
ATAAAAATAAGCGTTCACTTTAGAGAATAAAACGGGAAAGATCGACATCCGCGGCAAGATCACCTATAGATTTTTTGACA
TAAGCAGCATCAACTTTAAA

Product: ribosomal RNA small subunit methyltransferase c

Products: NA

Alternate protein names: 16S rRNA m2G1207 methyltransferase; rRNA (guanine-N(2)-)-methyltransferase rsmC [H]

Number of amino acids: Translated: 343; Mature: 343

Protein sequence:

>343_residues
MEWHFSLKEPHVLLFLPFEKYALPYPDPSQSWLSFGLTEIPVPEWTKNLEIITPWRPDFLKFANAQFRCSPEINQTCTHD
GALLQLSKYRGFNQNCFLDLLERVKPGGWIIIGGNKTSGADSMMKWVKKIVPITNKFSKNHGLVFWIQVPQQIEKQNTAQ
LRSPPLTFENKFQTTSGMFSHGRIDPGSAVLASHMCKTISGKTADFGAGWGFLSHAALERSEKLTALDLYEADYNALKAA
KQHLKHITTSLPIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDVSLGQHFIINAAKYLKPGGNLLLVANRHLPYETLL
KRLFRTVLIYEKAHGFKVIEAYR

Sequences:

>Translated_343_residues
MEWHFSLKEPHVLLFLPFEKYALPYPDPSQSWLSFGLTEIPVPEWTKNLEIITPWRPDFLKFANAQFRCSPEINQTCTHD
GALLQLSKYRGFNQNCFLDLLERVKPGGWIIIGGNKTSGADSMMKWVKKIVPITNKFSKNHGLVFWIQVPQQIEKQNTAQ
LRSPPLTFENKFQTTSGMFSHGRIDPGSAVLASHMCKTISGKTADFGAGWGFLSHAALERSEKLTALDLYEADYNALKAA
KQHLKHITTSLPIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDVSLGQHFIINAAKYLKPGGNLLLVANRHLPYETLL
KRLFRTVLIYEKAHGFKVIEAYR
>Mature_343_residues
MEWHFSLKEPHVLLFLPFEKYALPYPDPSQSWLSFGLTEIPVPEWTKNLEIITPWRPDFLKFANAQFRCSPEINQTCTHD
GALLQLSKYRGFNQNCFLDLLERVKPGGWIIIGGNKTSGADSMMKWVKKIVPITNKFSKNHGLVFWIQVPQQIEKQNTAQ
LRSPPLTFENKFQTTSGMFSHGRIDPGSAVLASHMCKTISGKTADFGAGWGFLSHAALERSEKLTALDLYEADYNALKAA
KQHLKHITTSLPIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDVSLGQHFIINAAKYLKPGGNLLLVANRHLPYETLL
KRLFRTVLIYEKAHGFKVIEAYR

Specific function: Specifically methylates the guanosine in position 1207 of 16S rRNA in the 30S particle [H]

COG id: COG2813

COG function: function code J; 16S RNA G1207 methylase RsmC

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmC family [H]

Homologues:

Organism=Escherichia coli, GI1790830, Length=291, Percent_Identity=27.8350515463918, Blast_Score=83, Evalue=3e-17,
Organism=Escherichia coli, GI87082206, Length=201, Percent_Identity=24.8756218905473, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR013675
- InterPro:   IPR002296
- InterPro:   IPR007848 [H]

Pfam domain/function: PF05175 MTS; PF08468 MTS_N [H]

EC number: =2.1.1.172 [H]

Molecular weight: Translated: 39189; Mature: 39189

Theoretical pI: Translated: 9.37; Mature: 9.37

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEWHFSLKEPHVLLFLPFEKYALPYPDPSQSWLSFGLTEIPVPEWTKNLEIITPWRPDFL
CCCCCCCCCCCEEEEECHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCHHHH
KFANAQFRCSPEINQTCTHDGALLQLSKYRGFNQNCFLDLLERVKPGGWIIIGGNKTSGA
HHCCCCEEECCCCCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCH
DSMMKWVKKIVPITNKFSKNHGLVFWIQVPQQIEKQNTAQLRSPPLTFENKFQTTSGMFS
HHHHHHHHHHHCHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
HGRIDPGSAVLASHMCKTISGKTADFGAGWGFLSHAALERSEKLTALDLYEADYNALKAA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
KQHLKHITTSLPIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDVSLGQHFIINAAKYL
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHH
KPGGNLLLVANRHLPYETLLKRLFRTVLIYEKAHGFKVIEAYR
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC
>Mature Secondary Structure
MEWHFSLKEPHVLLFLPFEKYALPYPDPSQSWLSFGLTEIPVPEWTKNLEIITPWRPDFL
CCCCCCCCCCCEEEEECHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEECCCCHHHH
KFANAQFRCSPEINQTCTHDGALLQLSKYRGFNQNCFLDLLERVKPGGWIIIGGNKTSGA
HHCCCCEEECCCCCCCCCCCCCEEEEHHHCCCCCHHHHHHHHHCCCCCEEEECCCCCCCH
DSMMKWVKKIVPITNKFSKNHGLVFWIQVPQQIEKQNTAQLRSPPLTFENKFQTTSGMFS
HHHHHHHHHHHCHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
HGRIDPGSAVLASHMCKTISGKTADFGAGWGFLSHAALERSEKLTALDLYEADYNALKAA
CCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEHHHHHHHHHHH
KQHLKHITTSLPIHFYWHDLVHEPITNLYDTIISNPPFHTQQTTDVSLGQHFIINAAKYL
HHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHCCHHHHHHHHHHH
KPGGNLLLVANRHLPYETLLKRLFRTVLIYEKAHGFKVIEAYR
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA