| Definition | Bartonella henselae str. Houston-1, complete genome. |
|---|---|
| Accession | NC_005956 |
| Length | 1,931,047 |
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The map label for this gene is secA [H]
Identifier: 49475011
GI number: 49475011
Start: 268135
End: 270852
Strand: Reverse
Name: secA [H]
Synonym: BH01990
Alternate gene names: 49475011
Gene position: 270852-268135 (Counterclockwise)
Preceding gene: 49475015
Following gene: 49475010
Centisome position: 14.03
GC content: 40.21
Gene sequence:
>2718_bases ATGGTCGGTTTAGGTGTCTTTGCACGTAAATTTTTTGGTTCAGCTCATGAACGGCGCCTCAAGGTTCTTCGCAAAAAAGC CGAACAAATTAATGTTTTGGAAGAGCAATTCCAGAAGTTAAGTGATACACAGCTTTGCAAAAAAACCGATGAATTTCGTA AACGTCTCGTGGAAGGTGAAACCGTTGATTTGCTCTTACCAGAAGCTTTCGCAACTGTCCGTGAAGCAGCAAAACGTGTT TATGATATGCGTCCTTTTGATGTACAGCTCATTGGTGGAATGGTGCTTCATGATTGTGGCATTGCTGAAATGCGCACCGG TGAAGGTAAAACATTAATGGCAACTTTGCCAATTTATCTCAACGCATTGGAAGGAAAAGGCGTTCATGTCGTGACAGTAA ACGATTATCTTGCCAATCGTGATGCTGAAACAATGGGAAAAATCTTCGGTTTTCTAGGACTTACAACGGGCGTGATTTTG CATGATCTTGATAGTGACGCCCGCCGAGCAGCCTATGCATGTGATATCACCTATGCCACAAACAATGAATTGGGTTTTGA TTATCTGCGCGATAATATGGCTTTCGACCGTAGTCAAATGGTCCAACGTGGGCATCATTATGCAATCGTCGATGAAGTTG ATTCGATCCTCATTGATGAAGCACGTACTCCTCTTATTATTTCTGGTCCTTTAGAAGATCGGACTGACTTCTATAACCTT ATTGATACATTTATCCCTGCCTTAACTCCAGAAGACTATGAAATAGACGAAAAACAAAAAACAACAACCTTTACCGAAGT TGGTACTGAAAAAATTGAAAAAATGCTCGAACAGGCAGGGCATCTTAAAGGTGAAAGTCTCTACGATATAGAAAATGTCG CTATCGTCCATCATATCAATAATGCTCTAAAAGCCCATAAGCTCTTTGTCCGTGACAAGGATTACATTGTCCGCAATGGT GAAATTGTTATCATTGATGAATTTACAGGTCGTATGATGCCGGGGCGGCGTTATTCTGAAGGGCTTCATCAAGCATTAGA AGCAAAAGAGCACGTTGCTATTCAACCAGAGAATCAGACTCTTGCTTCCATTACTTTCCAAAATTATTTCCGTATGTATA GAAAACTTTCTGGCATGACAGGTACTGCTATAACAGAAGCAGAAGAATTTAGTAATATTTATGGTCTTGACGTTATCGAA GTTCCCACAAATTTACCGATACAGCGTCGTGATGAAGATGATGAAATCTATCGAACAGCAGAAGAAAAATATCGTGCTAT TGTACGTGATATTCGTCAAGCACATGAAAAAAGACAGCCTATTCTTGTTGGAACAACTTCTATTGAAAAGTCAGAACAAT TGGCAGAACGTTTGCGAAAAGAAGGCATTACCAATTTTAGAGTTCTGAACGCCCGCTATCATGAACAAGAGGCATACATT ATTGCACAGGCAGGAGTTCCTGGAGCAGTAACTATCGCAACCAATATGGCTGGTCGCGGTACTGATATACAGCTTGGTGG TAATATCGAAATGCGCATTCGACAAGAATTACAGGATATGCCCGAAGGACTAGAACGAACTGCAAAAATTGAAGAAATTA AAAAAGACGTCAAGCAACTCAAAGAAAAAGCATTAGCTGCTGGTGGTCTTTATGTTATTGCTACTGAACGTCACGAAAGT CGCCGTATTGATAACCAACTACGTGGACGTTCTGGTCGCCAAGGCGATCCCGGTCGCTCAAAATTTTTTCTCTCTCTTCA AGATGATCTCATGCGAATCTTCGGTTCCAACCGCATGGATGGGATGTTGCAAAAACTTGGATTAAAAGAAAACGAAGCTA TTATTCATCCATGGATTAATAAAGCCATCGAAAAAGCGCAAAAAAAAGTTGAAGCAAGAAATTTCGAAATTCGTAAAAAT TTATTAAAATATGACGATGTGATGAATGATCAGCGCAAAGTTATTTTTGAACAACGTATGGAGATCATGAACGCAGAGGA TTTAACTGAAATGATTCTCGAAATGCGCAACGAAGTGGTTGAAGATCTTGTCGAAACCTACATTCCCTCTGGAACGTATT GCGAAAAATGGGACATTACAGCTCTACAAGAAGAACTTCATCAGCTCTTTAATCTTGAACTGCCAATCGAGACATGGGCA AAAGAAGATGGAATTGCTGAAGAACAAATCTTAGAGCGTATATCAAATGCTGTTACCAAACTTGAAAACGAACGTATTGA ACGCTTCTCTCCAGAAGTTATGGCTTATTTCCATAAGGCCGTATTACTTGAAACCATTGACACATTGTGGCGTGAACATC TGGTACATTTAGACCATCTCCGTTCCGTTGTCGGTTTTCGTGGTTATGCACAACGTGATCCTCTCAACGAATATAAGACA GAATCATTTGAACTCTTTCAAGCCATGCTTAGAAATTTACGCAGAATCGTTACCTCTAAACTCATGCGTTTCGAGATCAT TCAGCAACCCATAGAACCGCGCATACCTGAACAAACGGATGTTGGTGATCCTATTTTGAATGATCAAAATAAAAAAAATA GTTCTACCTTGTGGACACCATCACAAGAAAATAAATTCGTTAATCCGAAAGATCGTAATCCTAGTGATTCAACCACATGG GGGAAAGTGGGACGGAATGAACGTTGTCCTTGTGGTTCAGAAAAAAAATACAAACATTGTCACGGCGCCTTCGTCTGA
Upstream 100 bases:
>100_bases CTGCGTTTGGTTATATTAAATACCTTACGAGATTTAGAGTGTGGGGATAATATATGAAATACCCAGTAATAGTGGCAACA AATAAAAGAAAGGGCCAGGG
Downstream 100 bases:
>100_bases AAAATATAACAGTTAAGATGCATAAAAAGCGAAATTATGAGCAAGAATTACGCACTGCAGGTTTAAGAGTGACACGTCAA CGACGTATTATTCTTGATAT
Product: preprotein translocase subunit SecA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 905; Mature: 905
Protein sequence:
>905_residues MVGLGVFARKFFGSAHERRLKVLRKKAEQINVLEEQFQKLSDTQLCKKTDEFRKRLVEGETVDLLLPEAFATVREAAKRV YDMRPFDVQLIGGMVLHDCGIAEMRTGEGKTLMATLPIYLNALEGKGVHVVTVNDYLANRDAETMGKIFGFLGLTTGVIL HDLDSDARRAAYACDITYATNNELGFDYLRDNMAFDRSQMVQRGHHYAIVDEVDSILIDEARTPLIISGPLEDRTDFYNL IDTFIPALTPEDYEIDEKQKTTTFTEVGTEKIEKMLEQAGHLKGESLYDIENVAIVHHINNALKAHKLFVRDKDYIVRNG EIVIIDEFTGRMMPGRRYSEGLHQALEAKEHVAIQPENQTLASITFQNYFRMYRKLSGMTGTAITEAEEFSNIYGLDVIE VPTNLPIQRRDEDDEIYRTAEEKYRAIVRDIRQAHEKRQPILVGTTSIEKSEQLAERLRKEGITNFRVLNARYHEQEAYI IAQAGVPGAVTIATNMAGRGTDIQLGGNIEMRIRQELQDMPEGLERTAKIEEIKKDVKQLKEKALAAGGLYVIATERHES RRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSNRMDGMLQKLGLKENEAIIHPWINKAIEKAQKKVEARNFEIRKN LLKYDDVMNDQRKVIFEQRMEIMNAEDLTEMILEMRNEVVEDLVETYIPSGTYCEKWDITALQEELHQLFNLELPIETWA KEDGIAEEQILERISNAVTKLENERIERFSPEVMAYFHKAVLLETIDTLWREHLVHLDHLRSVVGFRGYAQRDPLNEYKT ESFELFQAMLRNLRRIVTSKLMRFEIIQQPIEPRIPEQTDVGDPILNDQNKKNSSTLWTPSQENKFVNPKDRNPSDSTTW GKVGRNERCPCGSEKKYKHCHGAFV
Sequences:
>Translated_905_residues MVGLGVFARKFFGSAHERRLKVLRKKAEQINVLEEQFQKLSDTQLCKKTDEFRKRLVEGETVDLLLPEAFATVREAAKRV YDMRPFDVQLIGGMVLHDCGIAEMRTGEGKTLMATLPIYLNALEGKGVHVVTVNDYLANRDAETMGKIFGFLGLTTGVIL HDLDSDARRAAYACDITYATNNELGFDYLRDNMAFDRSQMVQRGHHYAIVDEVDSILIDEARTPLIISGPLEDRTDFYNL IDTFIPALTPEDYEIDEKQKTTTFTEVGTEKIEKMLEQAGHLKGESLYDIENVAIVHHINNALKAHKLFVRDKDYIVRNG EIVIIDEFTGRMMPGRRYSEGLHQALEAKEHVAIQPENQTLASITFQNYFRMYRKLSGMTGTAITEAEEFSNIYGLDVIE VPTNLPIQRRDEDDEIYRTAEEKYRAIVRDIRQAHEKRQPILVGTTSIEKSEQLAERLRKEGITNFRVLNARYHEQEAYI IAQAGVPGAVTIATNMAGRGTDIQLGGNIEMRIRQELQDMPEGLERTAKIEEIKKDVKQLKEKALAAGGLYVIATERHES RRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSNRMDGMLQKLGLKENEAIIHPWINKAIEKAQKKVEARNFEIRKN LLKYDDVMNDQRKVIFEQRMEIMNAEDLTEMILEMRNEVVEDLVETYIPSGTYCEKWDITALQEELHQLFNLELPIETWA KEDGIAEEQILERISNAVTKLENERIERFSPEVMAYFHKAVLLETIDTLWREHLVHLDHLRSVVGFRGYAQRDPLNEYKT ESFELFQAMLRNLRRIVTSKLMRFEIIQQPIEPRIPEQTDVGDPILNDQNKKNSSTLWTPSQENKFVNPKDRNPSDSTTW GKVGRNERCPCGSEKKYKHCHGAFV >Mature_905_residues MVGLGVFARKFFGSAHERRLKVLRKKAEQINVLEEQFQKLSDTQLCKKTDEFRKRLVEGETVDLLLPEAFATVREAAKRV YDMRPFDVQLIGGMVLHDCGIAEMRTGEGKTLMATLPIYLNALEGKGVHVVTVNDYLANRDAETMGKIFGFLGLTTGVIL HDLDSDARRAAYACDITYATNNELGFDYLRDNMAFDRSQMVQRGHHYAIVDEVDSILIDEARTPLIISGPLEDRTDFYNL IDTFIPALTPEDYEIDEKQKTTTFTEVGTEKIEKMLEQAGHLKGESLYDIENVAIVHHINNALKAHKLFVRDKDYIVRNG EIVIIDEFTGRMMPGRRYSEGLHQALEAKEHVAIQPENQTLASITFQNYFRMYRKLSGMTGTAITEAEEFSNIYGLDVIE VPTNLPIQRRDEDDEIYRTAEEKYRAIVRDIRQAHEKRQPILVGTTSIEKSEQLAERLRKEGITNFRVLNARYHEQEAYI IAQAGVPGAVTIATNMAGRGTDIQLGGNIEMRIRQELQDMPEGLERTAKIEEIKKDVKQLKEKALAAGGLYVIATERHES RRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSNRMDGMLQKLGLKENEAIIHPWINKAIEKAQKKVEARNFEIRKN LLKYDDVMNDQRKVIFEQRMEIMNAEDLTEMILEMRNEVVEDLVETYIPSGTYCEKWDITALQEELHQLFNLELPIETWA KEDGIAEEQILERISNAVTKLENERIERFSPEVMAYFHKAVLLETIDTLWREHLVHLDHLRSVVGFRGYAQRDPLNEYKT ESFELFQAMLRNLRRIVTSKLMRFEIIQQPIEPRIPEQTDVGDPILNDQNKKNSSTLWTPSQENKFVNPKDRNPSDSTTW GKVGRNERCPCGSEKKYKHCHGAFV
Specific function: Part of the Sec protein translocase complex. Interacts with the secYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the pr
COG id: COG0653
COG function: function code U; Preprotein translocase subunit SecA (ATPase, RNA helicase)
Gene ontology:
Cell location: Cell inner membrane; Peripheral membrane protein; Cytoplasmic side. Cytoplasm (By similarity). Note=Distribution is 50-50 (By similarity) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the secA family [H]
Homologues:
Organism=Escherichia coli, GI1786287, Length=912, Percent_Identity=53.3991228070175, Blast_Score=930, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004027 - InterPro: IPR000185 - InterPro: IPR011115 - InterPro: IPR014018 - InterPro: IPR011130 - InterPro: IPR011116 [H]
Pfam domain/function: PF02810 SEC-C; PF07517 SecA_DEAD; PF01043 SecA_PP_bind; PF07516 SecA_SW [H]
EC number: NA
Molecular weight: Translated: 104141; Mature: 104141
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: PS01312 SECA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGLGVFARKFFGSAHERRLKVLRKKAEQINVLEEQFQKLSDTQLCKKTDEFRKRLVEGE CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TVDLLLPEAFATVREAAKRVYDMRPFDVQLIGGMVLHDCGIAEMRTGEGKTLMATLPIYL CEEEECHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCHHEECCCCCEEEEEHHHHH NALEGKGVHVVTVNDYLANRDAETMGKIFGFLGLTTGVILHDLDSDARRAAYACDITYAT HHCCCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEEEEC NNELGFDYLRDNMAFDRSQMVQRGHHYAIVDEVDSILIDEARTPLIISGPLEDRTDFYNL CCCCCHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH IDTFIPALTPEDYEIDEKQKTTTFTEVGTEKIEKMLEQAGHLKGESLYDIENVAIVHHIN HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH NALKAHKLFVRDKDYIVRNGEIVIIDEFTGRMMPGRRYSEGLHQALEAKEHVAIQPENQT HHHHHHHHHEECCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCH LASITFQNYFRMYRKLSGMTGTAITEAEEFSNIYGLDVIEVPTNLPIQRRDEDDEIYRTA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHH EEKYRAIVRDIRQAHEKRQPILVGTTSIEKSEQLAERLRKEGITNFRVLNARYHEQEAYI HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEE IAQAGVPGAVTIATNMAGRGTDIQLGGNIEMRIRQELQDMPEGLERTAKIEEIKKDVKQL EEECCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEKALAAGGLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSNRMD HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHH GMLQKLGLKENEAIIHPWINKAIEKAQKKVEARNFEIRKNLLKYDDVMNDQRKVIFEQRM HHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EIMNAEDLTEMILEMRNEVVEDLVETYIPSGTYCEKWDITALQEELHQLFNLELPIETWA HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH KEDGIAEEQILERISNAVTKLENERIERFSPEVMAYFHKAVLLETIDTLWREHLVHLDHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSVVGFRGYAQRDPLNEYKTESFELFQAMLRNLRRIVTSKLMRFEIIQQPIEPRIPEQTD HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VGDPILNDQNKKNSSTLWTPSQENKFVNPKDRNPSDSTTWGKVGRNERCPCGSEKKYKHC CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHH HGAFV CCCCC >Mature Secondary Structure MVGLGVFARKFFGSAHERRLKVLRKKAEQINVLEEQFQKLSDTQLCKKTDEFRKRLVEGE CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC TVDLLLPEAFATVREAAKRVYDMRPFDVQLIGGMVLHDCGIAEMRTGEGKTLMATLPIYL CEEEECHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHCCCHHEECCCCCEEEEEHHHHH NALEGKGVHVVTVNDYLANRDAETMGKIFGFLGLTTGVILHDLDSDARRAAYACDITYAT HHCCCCCEEEEEECHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEEEEEC NNELGFDYLRDNMAFDRSQMVQRGHHYAIVDEVDSILIDEARTPLIISGPLEDRTDFYNL CCCCCHHHHHHHHCCCHHHHHHCCCCEEEHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH IDTFIPALTPEDYEIDEKQKTTTFTEVGTEKIEKMLEQAGHLKGESLYDIENVAIVHHIN HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH NALKAHKLFVRDKDYIVRNGEIVIIDEFTGRMMPGRRYSEGLHQALEAKEHVAIQPENQT HHHHHHHHHEECCCEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEECCCCCH LASITFQNYFRMYRKLSGMTGTAITEAEEFSNIYGLDVIEVPTNLPIQRRDEDDEIYRTA HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHH EEKYRAIVRDIRQAHEKRQPILVGTTSIEKSEQLAERLRKEGITNFRVLNARYHEQEAYI HHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEE IAQAGVPGAVTIATNMAGRGTDIQLGGNIEMRIRQELQDMPEGLERTAKIEEIKKDVKQL EEECCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KEKALAAGGLYVIATERHESRRIDNQLRGRSGRQGDPGRSKFFLSLQDDLMRIFGSNRMD HHHHHHCCCEEEEEECCHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCHH GMLQKLGLKENEAIIHPWINKAIEKAQKKVEARNFEIRKNLLKYDDVMNDQRKVIFEQRM HHHHHCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH EIMNAEDLTEMILEMRNEVVEDLVETYIPSGTYCEKWDITALQEELHQLFNLELPIETWA HHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHH KEDGIAEEQILERISNAVTKLENERIERFSPEVMAYFHKAVLLETIDTLWREHLVHLDHL CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RSVVGFRGYAQRDPLNEYKTESFELFQAMLRNLRRIVTSKLMRFEIIQQPIEPRIPEQTD HHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC VGDPILNDQNKKNSSTLWTPSQENKFVNPKDRNPSDSTTWGKVGRNERCPCGSEKKYKHC CCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCHHHH HGAFV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA