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The map label for this gene is omp10 [H]

Identifier: 49474990

GI number: 49474990

Start: 242439

End: 242798

Strand: Reverse

Name: omp10 [H]

Synonym: BH01770

Alternate gene names: 49474990

Gene position: 242798-242439 (Counterclockwise)

Preceding gene: 49474997

Following gene: 49474987

Centisome position: 12.57

GC content: 35.0

Gene sequence:

>360_bases
ATGAAGCATACTTGCCGTATTTTATGTCTTATAATCACAGCTTTAGGATTAGGTGCCTGCGGCTTTTCGCAATATTATGG
TCCAAATATACAAACAGGAATTGATGGAAAATGGCTTGATGAAAACGGTATTATTTCCTCTTTCCAAAATGGTGTTTTTG
AAACGCGAGCAGCAGATACAGAAGAAAAACTATCAGAAGGTACCTATAATTATGTCAGTGCTCAACATATAGAAATTGAA
ATACGCTCCATTCTCCGTGGAACAATATCTAAAGTCAGTTGTATGATATCGCATAATGCAACACAACTTCTCTGTACATC
ACAAACAGGAACACAATTTTTCCTTAAGAGAAAATTTTAA

Upstream 100 bases:

>100_bases
TTTTCATTGATTTTCATCAAATTTTTCATATTGACTCATGGAGTAATTTAACAATCTTATAGAAGCAAAAGAGCAGGATA
ACACAAATAGAGTAAAAAAA

Downstream 100 bases:

>100_bases
ATAAAATAAACAAAGTCAAAGCTTCTATTAAAAACATAGAAAGCATCCTTATAATAGGAGGACACAAATCTCCCTGCGCG
AGAAAAATATCCTTTAAAAT

Product: Outer membrane lipoprotein precursor

Products: NA

Alternate protein names: 10 kDa OMP; Minor outer membrane protein omp10 [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MKHTCRILCLIITALGLGACGFSQYYGPNIQTGIDGKWLDENGIISSFQNGVFETRAADTEEKLSEGTYNYVSAQHIEIE
IRSILRGTISKVSCMISHNATQLLCTSQTGTQFFLKRKF

Sequences:

>Translated_119_residues
MKHTCRILCLIITALGLGACGFSQYYGPNIQTGIDGKWLDENGIISSFQNGVFETRAADTEEKLSEGTYNYVSAQHIEIE
IRSILRGTISKVSCMISHNATQLLCTSQTGTQFFLKRKF
>Mature_119_residues
MKHTCRILCLIITALGLGACGFSQYYGPNIQTGIDGKWLDENGIISSFQNGVFETRAADTEEKLSEGTYNYVSAQHIEIE
IRSILRGTISKVSCMISHNATQLLCTSQTGTQFFLKRKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhizobiaceae omp10 lipoprotein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13230; Mature: 13230

Theoretical pI: Translated: 7.86; Mature: 7.86

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHTCRILCLIITALGLGACGFSQYYGPNIQTGIDGKWLDENGIISSFQNGVFETRAADT
CCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCC
EEKLSEGTYNYVSAQHIEIEIRSILRGTISKVSCMISHNATQLLCTSQTGTQFFLKRKF
HHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECC
>Mature Secondary Structure
MKHTCRILCLIITALGLGACGFSQYYGPNIQTGIDGKWLDENGIISSFQNGVFETRAADT
CCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCCCCEECCCCCHHHHHCCCCCCCCCCC
EEKLSEGTYNYVSAQHIEIEIRSILRGTISKVSCMISHNATQLLCTSQTGTQFFLKRKF
HHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8557326; 10456959 [H]