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The map label for this gene is ycbY [C]

Identifier: 49474843

GI number: 49474843

Start: 12930

End: 13862

Strand: Reverse

Name: ycbY [C]

Synonym: BH00120

Alternate gene names: 49474843

Gene position: 13862-12930 (Counterclockwise)

Preceding gene: 49474844

Following gene: 49474842

Centisome position: 0.72

GC content: 42.12

Gene sequence:

>933_bases
ATGCTTGCGCAGTGCTTTCAACCAAATTCTAGCGGTATATATCCGCAAGAAAAGTTGCCTCTTATTTTAGAAACAGGTGT
GAGTCCAGATTATGCTCTCATCGATTCTGGTAATGGGAAAAAATTGGAACGTTATGGGGCTTACCGTATTATTCGACCAG
AAGGTCAAGCATTATGGAAACCAGCTTTATCAGAAAAACATTGGGCTAATGTTGATGCCATTTTTACAGGAAACCGGGAT
GAAGAAGGAGTTGGTCGTTGGTATTTTCCCAAAAAACCACTTGATGAAACATGGCCACTTTCTTGGAATGGGCTGTCCTT
TCTAGGGCGTTTTACTTCTTTTCGTCACGTGGGTGTTTTTCCTGAACAAGATGCTCATTGGCGCTTTATGGAAAAACAAA
TTGTTAATGCTACACGTCCTATTAAATTGCTCAATCTTTTTGGCTATACAGGTATTGCCTCTTTGATTAGTGCACGTGCG
GGTGCAAATGTAACGCATGTTGACGCTTCTAAAAAAGCCATTGCTTGGGCAAAAGCTAATCAAGAAAAAGCAGGATTATC
AGATCGCTCTATTCGCTGGATCTGCGATGATGCCGTAAAATTTGTTGAACGCGAACTACGTCGTCAAAAAACTTATGATA
TGATTCTTCTTGATCCTCCTGCATATGGACGTGGACCTCATGGCGAAATCTGGCAACTGTTTGATCACTTACCCGCAATG
ATCACAAACTGTCGTAAGCTTTTATCCGATGAACCTCTTGCCGTCGTACTCACAGCCTATTCTATCCGTGCTTCTTTCTA
TGCACTTCACACTCTCATGCGTGATGAATTTATAAATCTTGGTGGTACAGTCGAATCAGGAGAACTGATCTTGCGTGAAA
AAACCACCGGACGCGCTCTTTCTACTTCTCTTTTTAGCCGCTGGATTGCTTGA

Upstream 100 bases:

>100_bases
TCTTATAAATGTTTAATCGACTTTAGATCTTTGTATTATTATAGAAGTTTAAGAGCCTTTTAACATAATTTTTTTCAAGA
GCTGTATCGTGAAACCGAAT

Downstream 100 bases:

>100_bases
ACATGTGTATGCCTAAAACCGGTAAGGTTAAAGAAATTACCTCTCTTAGCAATCCTATCATTAAAGACCTTAAGGCACTT
AGCCAGAAAAAAAACCGTAA

Product: SAM dependent methyltransferase

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; Oxidoreductase; SAM-Dependent Methyltransferase-Like Protein; N6-Adenine-Specific DNA Methylase; LOW QUALITY PROTEIN SAM Dependent Methyltransferase; TRNA/RRNA Methyltransferase; SAM-Dependant Methyltransferase; RRNA-Methyltransferase; SAM-Dependent Methyltransferase Protein; Sam Dependent Methyltransferase

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MLAQCFQPNSSGIYPQEKLPLILETGVSPDYALIDSGNGKKLERYGAYRIIRPEGQALWKPALSEKHWANVDAIFTGNRD
EEGVGRWYFPKKPLDETWPLSWNGLSFLGRFTSFRHVGVFPEQDAHWRFMEKQIVNATRPIKLLNLFGYTGIASLISARA
GANVTHVDASKKAIAWAKANQEKAGLSDRSIRWICDDAVKFVERELRRQKTYDMILLDPPAYGRGPHGEIWQLFDHLPAM
ITNCRKLLSDEPLAVVLTAYSIRASFYALHTLMRDEFINLGGTVESGELILREKTTGRALSTSLFSRWIA

Sequences:

>Translated_310_residues
MLAQCFQPNSSGIYPQEKLPLILETGVSPDYALIDSGNGKKLERYGAYRIIRPEGQALWKPALSEKHWANVDAIFTGNRD
EEGVGRWYFPKKPLDETWPLSWNGLSFLGRFTSFRHVGVFPEQDAHWRFMEKQIVNATRPIKLLNLFGYTGIASLISARA
GANVTHVDASKKAIAWAKANQEKAGLSDRSIRWICDDAVKFVERELRRQKTYDMILLDPPAYGRGPHGEIWQLFDHLPAM
ITNCRKLLSDEPLAVVLTAYSIRASFYALHTLMRDEFINLGGTVESGELILREKTTGRALSTSLFSRWIA
>Mature_310_residues
MLAQCFQPNSSGIYPQEKLPLILETGVSPDYALIDSGNGKKLERYGAYRIIRPEGQALWKPALSEKHWANVDAIFTGNRD
EEGVGRWYFPKKPLDETWPLSWNGLSFLGRFTSFRHVGVFPEQDAHWRFMEKQIVNATRPIKLLNLFGYTGIASLISARA
GANVTHVDASKKAIAWAKANQEKAGLSDRSIRWICDDAVKFVERELRRQKTYDMILLDPPAYGRGPHGEIWQLFDHLPAM
ITNCRKLLSDEPLAVVLTAYSIRASFYALHTLMRDEFINLGGTVESGELILREKTTGRALSTSLFSRWIA

Specific function: Unknown

COG id: COG1092

COG function: function code R; Predicted SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35102; Mature: 35102

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAQCFQPNSSGIYPQEKLPLILETGVSPDYALIDSGNGKKLERYGAYRIIRPEGQALWK
CCCCCCCCCCCCCCCHHCCCEEEECCCCCCEEEEECCCCCEEHHCCCEEEECCCCCHHHH
PALSEKHWANVDAIFTGNRDEEGVGRWYFPKKPLDETWPLSWNGLSFLGRFTSFRHVGVF
HHCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCEECCC
PEQDAHWRFMEKQIVNATRPIKLLNLFGYTGIASLISARAGANVTHVDASKKAIAWAKAN
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCC
QEKAGLSDRSIRWICDDAVKFVERELRRQKTYDMILLDPPAYGRGPHGEIWQLFDHLPAM
CHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
ITNCRKLLSDEPLAVVLTAYSIRASFYALHTLMRDEFINLGGTVESGELILREKTTGRAL
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHH
STSLFSRWIA
HHHHHHHHCC
>Mature Secondary Structure
MLAQCFQPNSSGIYPQEKLPLILETGVSPDYALIDSGNGKKLERYGAYRIIRPEGQALWK
CCCCCCCCCCCCCCCHHCCCEEEECCCCCCEEEEECCCCCEEHHCCCEEEECCCCCHHHH
PALSEKHWANVDAIFTGNRDEEGVGRWYFPKKPLDETWPLSWNGLSFLGRFTSFRHVGVF
HHCCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHCEECCC
PEQDAHWRFMEKQIVNATRPIKLLNLFGYTGIASLISARAGANVTHVDASKKAIAWAKAN
CCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCEEEEECCC
QEKAGLSDRSIRWICDDAVKFVERELRRQKTYDMILLDPPAYGRGPHGEIWQLFDHLPAM
CHHCCCCCCCEEEHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHH
ITNCRKLLSDEPLAVVLTAYSIRASFYALHTLMRDEFINLGGTVESGELILREKTTGRAL
HHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCHHH
STSLFSRWIA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA