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The map label for this gene is bscR [H]

Identifier: 49185748

GI number: 49185748

Start: 2720589

End: 2721155

Strand: Reverse

Name: bscR [H]

Synonym: BAS2742

Alternate gene names: 49185748

Gene position: 2721155-2720589 (Counterclockwise)

Preceding gene: 49185749

Following gene: 49185747

Centisome position: 52.04

GC content: 32.45

Gene sequence:

>567_bases
ATGGCTAAAAATAAACAAGAAGACATTTTTGATGCGGCAATACAACTTTTTGCAGAACGAGGTTATGATGGTACAACAAT
TCCGATGATTGCTGAAAAAGCAAAAGTAGGTGCTGGTACCATTTATCGTTATTTTGAAAATAAAGAAGCACTTGTTAATT
CTTTATTTACGAAAAGTGTTTTACAGCTATCAGAGTTAATAAAAACCGACTTTCCAGTCAACGCAAATATTCGTGAACAG
TTTAGCCATACATACAACCGTTTATTTGAATTTGCAAGACAAAATGCAGATGCTTTTCTTTTTACGAATTCTCACTGTGA
TAGTTATTTTCTCGATGAACATAGTAATGAAATATTCGAGGATTTTATGGGTTTCTTTATGGACTTGATTGAGGATGGAA
TCGAAAAAGGTTTTCTCCGTCCATTACCACCAATTGCGTTAATTATCATTGTATATCAACCGATTGAAAAATTAATTAAA
GTAATGGAAACAGGCCAATTAGAATATACAGAAGAATTGGTAAAAGAACTGGAAGAAAGCTGTTGGAATGCTATTAGAAT
CATTTGA

Upstream 100 bases:

>100_bases
TTAAAAACGAAATGATACTTGTCACACACTTGACTTTTAACCGATGTAATTTATAATTAAAAACGGAATGAATTTTCATT
CCTGAAATTGAGGTGAAAAA

Downstream 100 bases:

>100_bases
TTCTATAGCGTTATAAGAACAGGAATGAACATTCATTCCGATGAGGGTGTGAAAAAGAAAAGTAGGAGATGATCAATCTG
TACAATTAAAGGAATGAATA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 188; Mature: 187

Protein sequence:

>188_residues
MAKNKQEDIFDAAIQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFTKSVLQLSELIKTDFPVNANIREQ
FSHTYNRLFEFARQNADAFLFTNSHCDSYFLDEHSNEIFEDFMGFFMDLIEDGIEKGFLRPLPPIALIIIVYQPIEKLIK
VMETGQLEYTEELVKELEESCWNAIRII

Sequences:

>Translated_188_residues
MAKNKQEDIFDAAIQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFTKSVLQLSELIKTDFPVNANIREQ
FSHTYNRLFEFARQNADAFLFTNSHCDSYFLDEHSNEIFEDFMGFFMDLIEDGIEKGFLRPLPPIALIIIVYQPIEKLIK
VMETGQLEYTEELVKELEESCWNAIRII
>Mature_187_residues
AKNKQEDIFDAAIQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFTKSVLQLSELIKTDFPVNANIREQF
SHTYNRLFEFARQNADAFLFTNSHCDSYFLDEHSNEIFEDFMGFFMDLIEDGIEKGFLRPLPPIALIIIVYQPIEKLIKV
METGQLEYTEELVKELEESCWNAIRII

Specific function: Negatively regulates the transcription of the bscR- CYP102A3 operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 21787; Mature: 21656

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKNKQEDIFDAAIQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFTKSV
CCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LQLSELIKTDFPVNANIREQFSHTYNRLFEFARQNADAFLFTNSHCDSYFLDEHSNEIFE
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHHH
DFMGFFMDLIEDGIEKGFLRPLPPIALIIIVYQPIEKLIKVMETGQLEYTEELVKELEES
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
CWNAIRII
HHHHHHCC
>Mature Secondary Structure 
AKNKQEDIFDAAIQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFTKSV
CCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH
LQLSELIKTDFPVNANIREQFSHTYNRLFEFARQNADAFLFTNSHCDSYFLDEHSNEIFE
HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHCCHHHHH
DFMGFFMDLIEDGIEKGFLRPLPPIALIIIVYQPIEKLIKVMETGQLEYTEELVKELEES
HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
CWNAIRII
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]