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The map label for this gene is yvrH [H]

Identifier: 49184060

GI number: 49184060

Start: 1094609

End: 1095313

Strand: Reverse

Name: yvrH [H]

Synonym: BAS1040

Alternate gene names: 49184060

Gene position: 1095313-1094609 (Counterclockwise)

Preceding gene: 49184073

Following gene: 49184059

Centisome position: 20.95

GC content: 36.88

Gene sequence:

>705_bases
ATGTATGAAGCAAATATTTTGCTCGTTGATGATGAAACAGCAATTTTACAATTACTAACTACCATTCTTGAAAAAGAAGG
TTTTTCTCATATTACAACTGCAACATCAGCTGAAATGGCTTTATCTCTCACTCAGCAAAACGATTACGATTTAATTATTT
TAGATGTCATGCTTCCTGGACAATCTGGTTTTGATATTTGTCCAATCATTCGTCAAAAAACAGATTGTCCTATCTTCTTC
CTCACAGCTAAAACATCTGATTTAGATAAAATATCTGGATTTTCACACGGTGCAGATGATTATATTACGAAGCCATTTAA
TCCACTTGAAGTGGTAGCTCGTATGAAAGCACAACTCCGAAGACATATGAAGCAAGTCATGCCACACGAACAAAAAGCAC
ACTCTAGTTCATTTGGCAGATTTGAAATTGATCGATATTCCGCAGAGCTTACAGTAAATGGGCGTGTTGTCGAATGTTCC
GCCCAGCTATTTCAGCTATTACTCTTCTTTTGCGAGAATCCGAACTACGTATTTTCAAAAGAAGAAATATACGAGAAAGT
TTGGGAAGCACCTGCCTACAATGGAGATGACAATACCGTTATGGTCCACATTCGAAAACTGCGTGAAAAAATTGAACAAG
ACCCAAGTAAACCAGAATATATAAAAACCGTTCGCGGACTTGGCTATAAGTTCATTACAAAGTAG

Upstream 100 bases:

>100_bases
TTCTTAATTTTTTGAGAAAGAAAACCTTAAAATTTCCTTAAAAATTCCATAAGTTACAGAAAGATGATATGATATTCGAG
GAAATTAGGAGGGATTTTTT

Downstream 100 bases:

>100_bases
GGTGACGATATGAACTTTAATAAACGACTTATTATCCAGTTTATACTGCAACACGTATTTGTTTTAGTTACATTACTAAT
TGCTGTAGTAGCTGCTTTCA

Product: DNA-binding response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MYEANILLVDDETAILQLLTTILEKEGFSHITTATSAEMALSLTQQNDYDLIILDVMLPGQSGFDICPIIRQKTDCPIFF
LTAKTSDLDKISGFSHGADDYITKPFNPLEVVARMKAQLRRHMKQVMPHEQKAHSSSFGRFEIDRYSAELTVNGRVVECS
AQLFQLLLFFCENPNYVFSKEEIYEKVWEAPAYNGDDNTVMVHIRKLREKIEQDPSKPEYIKTVRGLGYKFITK

Sequences:

>Translated_234_residues
MYEANILLVDDETAILQLLTTILEKEGFSHITTATSAEMALSLTQQNDYDLIILDVMLPGQSGFDICPIIRQKTDCPIFF
LTAKTSDLDKISGFSHGADDYITKPFNPLEVVARMKAQLRRHMKQVMPHEQKAHSSSFGRFEIDRYSAELTVNGRVVECS
AQLFQLLLFFCENPNYVFSKEEIYEKVWEAPAYNGDDNTVMVHIRKLREKIEQDPSKPEYIKTVRGLGYKFITK
>Mature_234_residues
MYEANILLVDDETAILQLLTTILEKEGFSHITTATSAEMALSLTQQNDYDLIILDVMLPGQSGFDICPIIRQKTDCPIFF
LTAKTSDLDKISGFSHGADDYITKPFNPLEVVARMKAQLRRHMKQVMPHEQKAHSSSFGRFEIDRYSAELTVNGRVVECS
AQLFQLLLFFCENPNYVFSKEEIYEKVWEAPAYNGDDNTVMVHIRKLREKIEQDPSKPEYIKTVRGLGYKFITK

Specific function: Member of the two-component regulatory system YvrG/YvrH that positively regulates 7 transcriptional units (wprA, wapA- yxxG, dltABCDE, sunA, sunT-bdbA-yolJ-bdbB, sigO-rsoA, and sigX- rsiX), and negatively regulates the lytABC operon [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=230, Percent_Identity=34.7826086956522, Blast_Score=145, Evalue=2e-36,
Organism=Escherichia coli, GI1790863, Length=234, Percent_Identity=35.4700854700855, Blast_Score=140, Evalue=7e-35,
Organism=Escherichia coli, GI1786599, Length=233, Percent_Identity=36.0515021459227, Blast_Score=138, Evalue=4e-34,
Organism=Escherichia coli, GI1788394, Length=227, Percent_Identity=34.8017621145374, Blast_Score=134, Evalue=5e-33,
Organism=Escherichia coli, GI87082012, Length=227, Percent_Identity=33.0396475770925, Blast_Score=128, Evalue=3e-31,
Organism=Escherichia coli, GI1786911, Length=228, Percent_Identity=31.140350877193, Blast_Score=123, Evalue=1e-29,
Organism=Escherichia coli, GI1790860, Length=232, Percent_Identity=32.7586206896552, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI1786784, Length=225, Percent_Identity=33.3333333333333, Blast_Score=122, Evalue=2e-29,
Organism=Escherichia coli, GI2367329, Length=234, Percent_Identity=32.9059829059829, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1790552, Length=236, Percent_Identity=32.2033898305085, Blast_Score=108, Evalue=2e-25,
Organism=Escherichia coli, GI1787229, Length=227, Percent_Identity=29.5154185022026, Blast_Score=106, Evalue=1e-24,
Organism=Escherichia coli, GI1789402, Length=233, Percent_Identity=32.1888412017167, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=28.6324786324786, Blast_Score=92, Evalue=2e-20,
Organism=Escherichia coli, GI1787375, Length=231, Percent_Identity=31.6017316017316, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 26813; Mature: 26813

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYEANILLVDDETAILQLLTTILEKEGFSHITTATSAEMALSLTQQNDYDLIILDVMLPG
CCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCHHHHEEEEECCCCCCEEEEEEEECC
QSGFDICPIIRQKTDCPIFFLTAKTSDLDKISGFSHGADDYITKPFNPLEVVARMKAQLR
CCCCCCCHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RHMKQVMPHEQKAHSSSFGRFEIDRYSAELTVNGRVVECSAQLFQLLLFFCENPNYVFSK
HHHHHHCCCHHHHCCCCCCCEEEEEEEEEEEECCEEEEHHHHHHHHHHHHHCCCCEEECH
EEIYEKVWEAPAYNGDDNTVMVHIRKLREKIEQDPSKPEYIKTVRGLGYKFITK
HHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCEEECCC
>Mature Secondary Structure
MYEANILLVDDETAILQLLTTILEKEGFSHITTATSAEMALSLTQQNDYDLIILDVMLPG
CCCCEEEEEECCHHHHHHHHHHHHHCCCCHHHHHCHHHHEEEEECCCCCCEEEEEEEECC
QSGFDICPIIRQKTDCPIFFLTAKTSDLDKISGFSHGADDYITKPFNPLEVVARMKAQLR
CCCCCCCHHHHCCCCCCEEEEEECCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
RHMKQVMPHEQKAHSSSFGRFEIDRYSAELTVNGRVVECSAQLFQLLLFFCENPNYVFSK
HHHHHHCCCHHHHCCCCCCCEEEEEEEEEEEECCEEEEHHHHHHHHHHHHHCCCCEEECH
EEIYEKVWEAPAYNGDDNTVMVHIRKLREKIEQDPSKPEYIKTVRGLGYKFITK
HHHHHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCCCCCHHHHHHHHCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]