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The map label for this gene is lstR

Identifier: 49183987

GI number: 49183987

Start: 1020721

End: 1021128

Strand: Direct

Name: lstR

Synonym: BAS0965

Alternate gene names: NA

Gene position: 1020721-1021128 (Clockwise)

Preceding gene: 49183986

Following gene: 49183988

Centisome position: 19.52

GC content: 38.24

Gene sequence:

>408_bases
ATGGAAGATCGATTAAAAGGCTTGCGAAAATCAATGGAGAACACAACTTTTAAACATTTGAGTTTTTCTGATCAGCACCA
GAAGCGGGTGCGTGAAAAAATTAATCAATCGTCCGAAAAAGAAGAAGACATCCTTTTAGCAGTGTTGCAACTTCTTATGA
ATGAAAAAACAGGTTATGAATTGGTGCAGTTACTACGGGGGAGAGGGATTCAAACATTTGAAGGTAATGAAGGGTCTCTA
TACACTTTGTTACATCGTCTAGAGCAGAATCGCTTTATCCAATCTAGCTGGGACCACGAAGGAGCTAAATATTATCAATT
AAATGATAAAGGAAACAAGATGCTGCGAAAGGCAGAGAAGAATGCTACGAAGGCACGATTTATATTAAAAGGCTTAGTAC
AGGAGTGA

Upstream 100 bases:

>100_bases
AAAGAGATTGCTACGGTAATAGAAGTGAAGGAAAACACGATAAAAACGAGGCTGAAAAAAGCAAAGGAGCTTTTGAAGAA
AGGATTGGAGGAATAGTCAA

Downstream 100 bases:

>100_bases
GAAAAAATTGAATAAAAAAGGGGAGCGTTTTTTAAAAGAAGTTACGAACCATATTAAATCAAAAGAAGCGAAGGACTTGG
TGGCAGCGGAACTAGACTTT

Product: lineage-specific thermal regulator protein

Products: NA

Alternate protein names: Transcriptional Regulator PadR Family; PadR Family Transcriptional Regulator

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYELVQLLRGRGIQTFEGNEGSL
YTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE

Sequences:

>Translated_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYELVQLLRGRGIQTFEGNEGSL
YTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE
>Mature_135_residues
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYELVQLLRGRGIQTFEGNEGSL
YTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEKNATKARFILKGLVQE

Specific function: Unknown

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15884; Mature: 15884

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
LVQLLRGRGIQTFEGNEGSLYTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEK
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC
>Mature Secondary Structure
MEDRLKGLRKSMENTTFKHLSFSDQHQKRVREKINQSSEKEEDILLAVLQLLMNEKTGYE
CCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHH
LVQLLRGRGIQTFEGNEGSLYTLLHRLEQNRFIQSSWDHEGAKYYQLNDKGNKMLRKAEK
HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHH
NATKARFILKGLVQE
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA