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The map label for this gene is tsr [C]

Identifier: 49183570

GI number: 49183570

Start: 582629

End: 584611

Strand: Direct

Name: tsr [C]

Synonym: BAS0544

Alternate gene names: 49183570

Gene position: 582629-584611 (Clockwise)

Preceding gene: 49183569

Following gene: 49183571

Centisome position: 11.14

GC content: 35.0

Gene sequence:

>1983_bases
ATGCAAAAAATATTTAACTGGGTTAAATGTATGAGTATCAAGAAAAAATTAATCATTTCATTTTTTCTTATTTTAACTAT
ACCAGGACTTATTATCGGTGGTGTTTCATATCAAACTGCCAAAACAAATTTTGAACAACAAATCACAGGTAAAGCAAAGG
AAAATATTTCGATTTTAAATACTGTTATTTCTCAAAATATAGAAGAGAAATTTGTTGATGCAGCATACTTTGCGGACATC
TTAACAGAGGATACATATCCAAACGGACAAGAAGAAATAGTAAGAACGAAATTAGCGCAATATATAAAACTTCATCCAGA
AGTAGAAGGTATTTACATTGGAACGCAGACGGGAAAGTTTATAAGAGAACCATTTATCCAAATGTCTGATGGGTATAATC
CAACAGATAGAGATTGGTATAAAGAAGCACATGAAAATAAAGGGAAAGTAATTGTTACTGCGCCATATCAATCAGCATCT
ACAAAAAATATGGTAGTGACAATTGCTAAAGAAGTAAAAGATGGTAAAGGTGTTATAGGGATTAACTTAAATTTAGATAA
CATTTTAAAAATCTCCAAAATGATTAATATTGGGGAAAAAGGTTATGCAGTTATTTTAGATCAAAATAAGCAAATTGTTA
GTCATCCATCTAGAAAACCAGGTGCAAAAGTTACTGATCCTTGGATTAAACCAATTTATGAAGATAAACAACGAAATGTT
GCTTATACAGAAAAAGATGATAAAAAGAATTTAATCTTTGCAACAAATGAGAAAACGGGCTGGAAAGTAGTTGGAGTCAT
GTTTGATGAAGAAATTACCCAAGCTGCGAATCCAGTTTTTTATAAGACTTTTATTGTCATTGCTATCGCTATTGTATTTG
GCAGTGTATTAATTTATTTCATCACAAAGTCTATTACAAGACCATTAAGAAAAATAGCTGACTCGGCATATAAAATTAGT
AAGGGAGATTTGACCGAGAAAATTACAATTCATTCCAAGGATGATATAGGGAAATTAGGGAATTCCTTTAATGAAATGTC
TGCCTCTTTACAAGATGTGATTACTCAAATTAGTTTTTCAGCAGAGCATGTCGCTGCATCGGCTGAAGAGTTAACAGCGA
GCGTACAGCAAGCAAATGATGCGACAGATCAAATTACAATTGCAATGGAACAAGTATCAGGTGGGGCTGAATCACAAAGT
CAAGGTGTTGAAGAAGGTGCGGCTACATTACAACAAGTAAATACAGCAATTCAAGATGTAAACGGAAGCGCGGAATCGAT
TTCTATCTCCTCATTGCATGCGAGAGAGCGAGCTAAAGAGGGGGAAGACTTGGTTGAACAAACTGCAACACAAATGCAGT
CTATTTCTAGGTCGGTATCCGAGTCGGACGCTATTATTAAACTTCTTGATGAGAAATCAAAGCAGGTAGGAGCTATTTCT
GAAGCAATTCAAAATATCGCTACTCAAACGAACCTTTTAGCTTTAAATGCGGCTATTGAAGCAGCAAGAGCAGGTGAACA
GGGCCGAGGGTTTGCTATTGTAGCAGATGAGGTTAGAAAATTAGCGGAGCAATCAGGAGAATCATCTGGAGAGATTGCGA
ATTTAATTGCAGAAATTAAGGCTGATATTGAACATACTGTTAAGGCGATGGATAATGTGAATGGAGAAGTTCAACAAGGT
CTTGATGTTGTAACAAAAACGAAAGTAAGTTTTACGGAAATTTTAAGTTCTACTACACATATTGTTTCTCAAGTGAATGA
AATGGTAGAAACAACGAAGAGAATTGCTGGAGATGCAAATGAAGTGACAAATGCTATTGATGAAATTGCAGCGGCTGCAG
AAGAAAATACGGCTAGTATGCAAAGTGTTGCTGCTTCAACAGAAGAACAAGTGAATTCAATGGAAGAAATTAGTTCAGCT
TCGCAAAACTTAGCTGAGATGGCCGAAGAACTACAAGCGATGACTAGTAAATTTAAAGTATAA

Upstream 100 bases:

>100_bases
TAATTGACAAAAATATTACATGTTATCATTATATATTGTTTTATATATGTCACTTGTATAAAATTACACAAGTATTCACA
TTACATAAAGGAGGCTTATT

Downstream 100 bases:

>100_bases
TAACAGCAGATAAGTAAGGTGAGAATAATATCACCTTACTTATTTTTCTATTCAGCAATTAGGGGAGTCATTAACGGGAT
GAAAAAAAGGAAAAGACTAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 660; Mature: 660

Protein sequence:

>660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQRNV
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNTAIQDVNGSAESISISSLHARERAKEGEDLVEQTATQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV

Sequences:

>Translated_660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQRNV
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNTAIQDVNGSAESISISSLHARERAKEGEDLVEQTATQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV
>Mature_660_residues
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILNTVISQNIEEKFVDAAYFADI
LTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKFIREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSAS
TKNMVVTIAKEVKDGKGVIGINLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQRNV
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYFITKSITRPLRKIADSAYKIS
KGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFSAEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQS
QGVEEGAATLQQVNTAIQDVNGSAESISISSLHARERAKEGEDLVEQTATQMQSISRSVSESDAIIKLLDEKSKQVGAIS
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIKADIEHTVKAMDNVNGEVQQG
LDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDANEVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSA
SQNLAEMAEELQAMTSKFKV

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=391, Percent_Identity=29.156010230179, Blast_Score=133, Evalue=3e-32,
Organism=Escherichia coli, GI1787690, Length=379, Percent_Identity=29.287598944591, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI1788195, Length=317, Percent_Identity=30.9148264984227, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1788194, Length=361, Percent_Identity=27.7008310249307, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI1789453, Length=399, Percent_Identity=25.062656641604, Blast_Score=107, Evalue=2e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 72071; Mature: 72071

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHH
TVISQNIEEKFVDAAYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHCCHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQRNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYF
CCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIADSAYKISKGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNTAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHC
NGSAESISISSLHARERAKEGEDLVEQTATQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASQNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKIFNWVKCMSIKKKLIISFFLILTIPGLIIGGVSYQTAKTNFEQQITGKAKENISILN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHCCCHHHHHHHHH
TVISQNIEEKFVDAAYFADILTEDTYPNGQEEIVRTKLAQYIKLHPEVEGIYIGTQTGKF
HHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHH
IREPFIQMSDGYNPTDRDWYKEAHENKGKVIVTAPYQSASTKNMVVTIAKEVKDGKGVIG
HHCCHHHHCCCCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEHHHCCCCCEEE
INLNLDNILKISKMINIGEKGYAVILDQNKQIVSHPSRKPGAKVTDPWIKPIYEDKQRNV
EECCHHHHHHHHHHHCCCCCCEEEEECCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCC
AYTEKDDKKNLIFATNEKTGWKVVGVMFDEEITQAANPVFYKTFIVIAIAIVFGSVLIYF
CCCCCCCCCCEEEEECCCCCCEEEEEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
ITKSITRPLRKIADSAYKISKGDLTEKITIHSKDDIGKLGNSFNEMSASLQDVITQISFS
HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHCC
AEHVAASAEELTASVQQANDATDQITIAMEQVSGGAESQSQGVEEGAATLQQVNTAIQDV
HHHHHHHHHHHHHHHHHCCCCCHHEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHC
NGSAESISISSLHARERAKEGEDLVEQTATQMQSISRSVSESDAIIKLLDEKSKQVGAIS
CCCCCEEEHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAIQNIATQTNLLALNAAIEAARAGEQGRGFAIVADEVRKLAEQSGESSGEIANLIAEIK
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCCCCCHHHHHHHHHHH
ADIEHTVKAMDNVNGEVQQGLDVVTKTKVSFTEILSSTTHIVSQVNEMVETTKRIAGDAN
HHHHHHHHHHHCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH
EVTNAIDEIAAAAEENTASMQSVAASTEEQVNSMEEISSASQNLAEMAEELQAMTSKFKV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA