Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447659

Identifier: 46447659

GI number: 46447659

Start: 2408632

End: 2408991

Strand: Direct

Name: 46447659

Synonym: pc2025

Alternate gene names: NA

Gene position: 2408632-2408991 (Clockwise)

Preceding gene: 46447658

Following gene: 46447660

Centisome position: 99.76

GC content: 33.06

Gene sequence:

>360_bases
ATGAACAACATTAATTTGGCTAATCCTAACGCTTATTATCCAGAAATATTGACACAAGAGCTATCAAGTTCTACAATTTC
TTGTGAAAATCCTCACTATGTAATCGTGAAAGCTCCTCAACAAGAAGATCACATTTTATCGAAAACAACCCTTGTTATCC
AGGCGATCTTTAATTTTTTATTTCAAATGTTTGAATGCATGTGCCATTACGCTCGTTTATTGGCAAATGGGCTTATTTCA
ATAAAAACTAAATTAATAGGAATAGATCTCCATCTCCACTTTCATCTATTTACTGTTAATATTAATTATGATGTTTCCAA
CCCACAAAATACTTCTCCGAGCGGAGTTTTGGCCTGTTAA

Upstream 100 bases:

>100_bases
CTTCACCAACATTTTGTTACTAAACTTGATAGAGAACTAATTGATGGATATTTTGATACATCCAAATTTTTTCAAATTCA
TAAAAAAAGGATAGAAGTGT

Downstream 100 bases:

>100_bases
ATAGCAATGATATGTGTTTTATTTTGGTGTGAGAAGAAAAGGTTGAAAATTAACGACTTGAAAAGCTTTCTGATGCTTAT
GAGAATAATCCTTAAATTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MNNINLANPNAYYPEILTQELSSSTISCENPHYVIVKAPQQEDHILSKTTLVIQAIFNFLFQMFECMCHYARLLANGLIS
IKTKLIGIDLHLHFHLFTVNINYDVSNPQNTSPSGVLAC

Sequences:

>Translated_119_residues
MNNINLANPNAYYPEILTQELSSSTISCENPHYVIVKAPQQEDHILSKTTLVIQAIFNFLFQMFECMCHYARLLANGLIS
IKTKLIGIDLHLHFHLFTVNINYDVSNPQNTSPSGVLAC
>Mature_119_residues
MNNINLANPNAYYPEILTQELSSSTISCENPHYVIVKAPQQEDHILSKTTLVIQAIFNFLFQMFECMCHYARLLANGLIS
IKTKLIGIDLHLHFHLFTVNINYDVSNPQNTSPSGVLAC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13424; Mature: 13424

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNINLANPNAYYPEILTQELSSSTISCENPHYVIVKAPQQEDHILSKTTLVIQAIFNFL
CCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
FQMFECMCHYARLLANGLISIKTKLIGIDLHLHFHLFTVNINYDVSNPQNTSPSGVLAC
HHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEC
>Mature Secondary Structure
MNNINLANPNAYYPEILTQELSSSTISCENPHYVIVKAPQQEDHILSKTTLVIQAIFNFL
CCCCCCCCCCCCCHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
FQMFECMCHYARLLANGLISIKTKLIGIDLHLHFHLFTVNINYDVSNPQNTSPSGVLAC
HHHHHHHHHHHHHHHCCCEEEEEEEEEEEEEEEEEEEEEEEEEECCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA