| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46447658
Identifier: 46447658
GI number: 46447658
Start: 2407806
End: 2408645
Strand: Direct
Name: 46447658
Synonym: pc2024
Alternate gene names: NA
Gene position: 2407806-2408645 (Clockwise)
Preceding gene: 46447655
Following gene: 46447659
Centisome position: 99.72
GC content: 32.86
Gene sequence:
>840_bases TTGGAGGGATTTATGACAATTAATCTTAGTATTGACAATCCTTGTGAGGTTATTATCGGCTCTCTTAACATTCTTAATTC TTGGGATCAACTTCACAAAGATGTCCAAATCGACAGTAAAACAGGCCTTTCTTCTTCCCCTCCTTCTGTAACTAAAGCTG CTACGAAAAGGTTTTTTGACAATATTGGCGCACCCTCCTCCTATTCTAAGGTAAAGTTTTTAAGCGATATGGATATTCAA ATGTTTGCCTTTTTTAATTTTAGCCTTTACAAATTTTATTTTTATCAAATCAAAGACCTTTCTGATTTCAATGATTCTAC CCAATTATCACTACAACTTGACAAAGCTAAACAGATTGCCGCTAAAGCCATTCAAGAATATCAAGCCTGTATGAAGCTTT TAGAAAATGGCCTTGCTCGAGAAATGATCAGTTTTGTCCCGACTTTTATATTCGATTATTTCTGCAACTATGAATTTGTA AATATAACAAAAATAATTGAACCAGATTTACTTGCTCCACCCAGTGAATATGCCGATTATTTAATTGATCTATTTCCTAA AGCAAAATTGGGAAATTTTTGTTTAATCGCTCAAAAAGTACAGTATATTAAATTACCGTTTGAATCCTGGTCTATTATTG ATTGTGCAGAGCATACAGAAAAGATGGTACCAGCGGAGGTTTTTGCGAGAGTTCATCATCGTGCGATGGAAGAAATCAAG TATTTACTTCACCAACATTTTGTTACTAAACTTGATAGAGAACTAATTGATGGATATTTTGATACATCCAAATTTTTTCA AATTCATAAAAAAAGGATAGAAGTGTATGAACAACATTAA
Upstream 100 bases:
>100_bases GCTGATTGCTACTTTTAAAAACATGAAAACATAGTTAAAAAACGAACATGAAAAAAATTAAAAAATATGTTGAAGTTTTA ACTGAAATATATAGGATAAA
Downstream 100 bases:
>100_bases TTTGGCTAATCCTAACGCTTATTATCCAGAAATATTGACACAAGAGCTATCAAGTTCTACAATTTCTTGTGAAAATCCTC ACTATGTAATCGTGAAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 279
Protein sequence:
>279_residues MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFDNIGAPSSYSKVKFLSDMDIQ MFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIAAKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFV NITKIIEPDLLAPPSEYADYLIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH
Sequences:
>Translated_279_residues MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFDNIGAPSSYSKVKFLSDMDIQ MFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIAAKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFV NITKIIEPDLLAPPSEYADYLIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH >Mature_279_residues MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFDNIGAPSSYSKVKFLSDMDIQ MFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIAAKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFV NITKIIEPDLLAPPSEYADYLIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32457; Mature: 32457
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFD CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH NIGAPSSYSKVKFLSDMDIQMFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIA HCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH AKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFVNITKIIEPDLLAPPSEYADY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHH LIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK HHHHCCCCCCCCCHHHHHHHHHEECCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHH YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFD CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH NIGAPSSYSKVKFLSDMDIQMFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIA HCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH AKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFVNITKIIEPDLLAPPSEYADY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHH LIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK HHHHCCCCCCCCCHHHHHHHHHEECCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHH YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA