Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46447658

Identifier: 46447658

GI number: 46447658

Start: 2407806

End: 2408645

Strand: Direct

Name: 46447658

Synonym: pc2024

Alternate gene names: NA

Gene position: 2407806-2408645 (Clockwise)

Preceding gene: 46447655

Following gene: 46447659

Centisome position: 99.72

GC content: 32.86

Gene sequence:

>840_bases
TTGGAGGGATTTATGACAATTAATCTTAGTATTGACAATCCTTGTGAGGTTATTATCGGCTCTCTTAACATTCTTAATTC
TTGGGATCAACTTCACAAAGATGTCCAAATCGACAGTAAAACAGGCCTTTCTTCTTCCCCTCCTTCTGTAACTAAAGCTG
CTACGAAAAGGTTTTTTGACAATATTGGCGCACCCTCCTCCTATTCTAAGGTAAAGTTTTTAAGCGATATGGATATTCAA
ATGTTTGCCTTTTTTAATTTTAGCCTTTACAAATTTTATTTTTATCAAATCAAAGACCTTTCTGATTTCAATGATTCTAC
CCAATTATCACTACAACTTGACAAAGCTAAACAGATTGCCGCTAAAGCCATTCAAGAATATCAAGCCTGTATGAAGCTTT
TAGAAAATGGCCTTGCTCGAGAAATGATCAGTTTTGTCCCGACTTTTATATTCGATTATTTCTGCAACTATGAATTTGTA
AATATAACAAAAATAATTGAACCAGATTTACTTGCTCCACCCAGTGAATATGCCGATTATTTAATTGATCTATTTCCTAA
AGCAAAATTGGGAAATTTTTGTTTAATCGCTCAAAAAGTACAGTATATTAAATTACCGTTTGAATCCTGGTCTATTATTG
ATTGTGCAGAGCATACAGAAAAGATGGTACCAGCGGAGGTTTTTGCGAGAGTTCATCATCGTGCGATGGAAGAAATCAAG
TATTTACTTCACCAACATTTTGTTACTAAACTTGATAGAGAACTAATTGATGGATATTTTGATACATCCAAATTTTTTCA
AATTCATAAAAAAAGGATAGAAGTGTATGAACAACATTAA

Upstream 100 bases:

>100_bases
GCTGATTGCTACTTTTAAAAACATGAAAACATAGTTAAAAAACGAACATGAAAAAAATTAAAAAATATGTTGAAGTTTTA
ACTGAAATATATAGGATAAA

Downstream 100 bases:

>100_bases
TTTGGCTAATCCTAACGCTTATTATCCAGAAATATTGACACAAGAGCTATCAAGTTCTACAATTTCTTGTGAAAATCCTC
ACTATGTAATCGTGAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFDNIGAPSSYSKVKFLSDMDIQ
MFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIAAKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFV
NITKIIEPDLLAPPSEYADYLIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK
YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH

Sequences:

>Translated_279_residues
MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFDNIGAPSSYSKVKFLSDMDIQ
MFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIAAKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFV
NITKIIEPDLLAPPSEYADYLIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK
YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH
>Mature_279_residues
MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFDNIGAPSSYSKVKFLSDMDIQ
MFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIAAKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFV
NITKIIEPDLLAPPSEYADYLIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK
YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32457; Mature: 32457

Theoretical pI: Translated: 5.86; Mature: 5.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFD
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
NIGAPSSYSKVKFLSDMDIQMFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIA
HCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH
AKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFVNITKIIEPDLLAPPSEYADY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHH
LIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK
HHHHCCCCCCCCCHHHHHHHHHEECCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHH
YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEGFMTINLSIDNPCEVIIGSLNILNSWDQLHKDVQIDSKTGLSSSPPSVTKAATKRFFD
CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
NIGAPSSYSKVKFLSDMDIQMFAFFNFSLYKFYFYQIKDLSDFNDSTQLSLQLDKAKQIA
HCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHH
AKAIQEYQACMKLLENGLAREMISFVPTFIFDYFCNYEFVNITKIIEPDLLAPPSEYADY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHCCCCCCCCCHHHHHH
LIDLFPKAKLGNFCLIAQKVQYIKLPFESWSIIDCAEHTEKMVPAEVFARVHHRAMEEIK
HHHHCCCCCCCCCHHHHHHHHHEECCCCCCCEEHHHHHHHHCCCHHHHHHHHHHHHHHHH
YLLHQHFVTKLDRELIDGYFDTSKFFQIHKKRIEVYEQH
HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA