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The map label for this gene is yqjF [H]

Identifier: 46447620

GI number: 46447620

Start: 2368068

End: 2368730

Strand: Reverse

Name: yqjF [H]

Synonym: pc1986

Alternate gene names: 46447620

Gene position: 2368730-2368068 (Counterclockwise)

Preceding gene: 46447621

Following gene: 46447619

Centisome position: 98.11

GC content: 33.33

Gene sequence:

>663_bases
ATGGATCAAAAATGGAGTGATATCCTTTTTGTGAACTGGGAATGTGATCCAAAAGAGATACAAAAGACGCTGCCTGAAGA
GTTATTCGTAGATACTTTTCAAGGAAAGGCTTACATGGGTATTCAAGCTTTTAAAGTGGAAGAAGCGAAATTGAAATCTT
TTTTTTTCTCACCTCGGTTTGAAAACTTTTTAGCTTTAAATATTCAAACATATGTTTACGATCAAAATAGAGTTCCGGGT
ATCTGGTTTTATTCTTTATTAGCTGATCAAAAACTAGTTGTAGAATTAGCCAAGCAGTTTTTGACCTTGCCCTATCACTA
TACTAAAATGGAAATTCTTCGAAACTCTGAGAAGTCTACTTTGATGGTTCACCAAGAGAAGCATCCTTTACTCTCTTGGC
AAAATTCATTAAGGTCCCATGATATATTTGCTGAACCCGATAGCCTTGAATTTTTTTTGCTAGAGCGTTATGTGGTTTAT
ACTTTAAAACAATCTCTTTTAAAAAAAGGATTTGTTTATCACTCTCCCTTTAAGTATTCGCTAATAAAAATTTTAGAATT
TTCTCCTTCCAACAGTCTTTATTCAAACTTTCTTCCCTGTAATCATTCCTTCCATGCTTTTTTTTCTCCCCATAGTCAGA
TAGAAATCTTTAAACCTATCTGA

Upstream 100 bases:

>100_bases
ACCTAAATTTTTCAAACCTTTCATTTGCCACTTTATGACCAAACCTACCCTTGATGATCGTTTACGAGTCCAAAACTATC
CCAATAATCAAGTTTCTTTG

Downstream 100 bases:

>100_bases
TTCTCTAAAAACTTATTGAATTGGCATGAATTTTGCTTAATAAAATTAATAACAGATCTATTAATTAAAATTATTAAAAT
ATTTAATTAATTAAATTAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDQKWSDILFVNWECDPKEIQKTLPEELFVDTFQGKAYMGIQAFKVEEAKLKSFFFSPRFENFLALNIQTYVYDQNRVPG
IWFYSLLADQKLVVELAKQFLTLPYHYTKMEILRNSEKSTLMVHQEKHPLLSWQNSLRSHDIFAEPDSLEFFLLERYVVY
TLKQSLLKKGFVYHSPFKYSLIKILEFSPSNSLYSNFLPCNHSFHAFFSPHSQIEIFKPI

Sequences:

>Translated_220_residues
MDQKWSDILFVNWECDPKEIQKTLPEELFVDTFQGKAYMGIQAFKVEEAKLKSFFFSPRFENFLALNIQTYVYDQNRVPG
IWFYSLLADQKLVVELAKQFLTLPYHYTKMEILRNSEKSTLMVHQEKHPLLSWQNSLRSHDIFAEPDSLEFFLLERYVVY
TLKQSLLKKGFVYHSPFKYSLIKILEFSPSNSLYSNFLPCNHSFHAFFSPHSQIEIFKPI
>Mature_220_residues
MDQKWSDILFVNWECDPKEIQKTLPEELFVDTFQGKAYMGIQAFKVEEAKLKSFFFSPRFENFLALNIQTYVYDQNRVPG
IWFYSLLADQKLVVELAKQFLTLPYHYTKMEILRNSEKSTLMVHQEKHPLLSWQNSLRSHDIFAEPDSLEFFLLERYVVY
TLKQSLLKKGFVYHSPFKYSLIKILEFSPSNSLYSNFLPCNHSFHAFFSPHSQIEIFKPI

Specific function: Unknown

COG id: COG3361

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018644 [H]

Pfam domain/function: PF09844 DUF2071 [H]

EC number: NA

Molecular weight: Translated: 26178; Mature: 26178

Theoretical pI: Translated: 7.27; Mature: 7.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQKWSDILFVNWECDPKEIQKTLPEELFVDTFQGKAYMGIQAFKVEEAKLKSFFFSPRF
CCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHCCCCEEECEEEEEEHHHHHHHHHCCCCC
ENFLALNIQTYVYDQNRVPGIWFYSLLADQKLVVELAKQFLTLPYHYTKMEILRNSEKST
CCEEEEEEEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
LMVHQEKHPLLSWQNSLRSHDIFAEPDSLEFFLLERYVVYTLKQSLLKKGFVYHSPFKYS
EEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHE
LIKILEFSPSNSLYSNFLPCNHSFHAFFSPHSQIEIFKPI
EEEEEECCCCCCHHHCCCCCCCCCEEEECCCCCEEEECCC
>Mature Secondary Structure
MDQKWSDILFVNWECDPKEIQKTLPEELFVDTFQGKAYMGIQAFKVEEAKLKSFFFSPRF
CCCCCCCEEEEEECCCHHHHHHHCCHHHHHHHCCCCEEECEEEEEEHHHHHHHHHCCCCC
ENFLALNIQTYVYDQNRVPGIWFYSLLADQKLVVELAKQFLTLPYHYTKMEILRNSEKST
CCEEEEEEEEEEEECCCCCHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCE
LMVHQEKHPLLSWQNSLRSHDIFAEPDSLEFFLLERYVVYTLKQSLLKKGFVYHSPFKYS
EEEECCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEECCHHHE
LIKILEFSPSNSLYSNFLPCNHSFHAFFSPHSQIEIFKPI
EEEEEECCCCCCHHHCCCCCCCCCEEEECCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 10568751 [H]