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The map label for this gene is fixN [H]

Identifier: 46447612

GI number: 46447612

Start: 2358011

End: 2359426

Strand: Reverse

Name: fixN [H]

Synonym: pc1978

Alternate gene names: 46447612

Gene position: 2359426-2358011 (Counterclockwise)

Preceding gene: 46447613

Following gene: 46447611

Centisome position: 97.72

GC content: 35.88

Gene sequence:

>1416_bases
ATGGTTACATATGACGATAGACCAGCTAAATTGTTCTTATATCCCTCCATCATATTTATGATTATTGGAATGATCATTGG
TGTTTTTATTGCTTTCAACGGTTTTATTTTTCCTGATTATTTTGCTGGTGAGTATATTCATTTTGGTCGTGTCAGACCTG
TACACGTAGGGACTGTCACATTGTTGTGGTTACTATCCGTGGATATAGGGTTAATGTATTATTTTATTCCTCGTCTTTGT
GGCATTTCTATATGGAGCTCTAAACTTGCTTTTTGGGGAGCTGCTCTGTGGTGGCTTTCATTGACATTAGGAGTCAATTC
ATTTCCTTGGGGAACAAATTTTGGTTGGGAATATGCTGAACTGCCCGATTGGGTCTCTTGGATTCCCGTTAAATATTTAT
TTGTGTTAGGGTGGATTTTTATCGTCATTAATTTTTTTATGACAATAGCAAATAGACGTTTTGAAAAATTATATGTTTCT
CTTTGGTACAGCATGGGGACATTGATTTGGACAACATTTGTTGTATTTGTGGGAAGTATTGCTATTAATTGGCTACCTGA
AGGTATGTCAAGAGTTAATGCTAGTTGGTTTTATGTTCATAACCTTGTTGGATTAATTTATACTCCAATGGGATTAGCCA
CAGCTTATTATTTTCTTCCTAAAATAGCGGGTACACCCATATATAGCCACCGCCTATCAATGATAGGATTTTGGTCTATT
GCTTTTATTTATGCTTGGATTGGCACGCATCATATTATTCACGGGCCCGTTTCTCAATGGCTTCAAACAACTTCCATCAT
ATTTTCAATTTGGATGTTTATTCCAGTATGGACAGTGGTATTTAACTTATTTGCCACCTTGCAAAAAGATTGGCTAAAGT
ATTTAGAAAGCGCCCCCATTAGATTTTTAATGATGGGTAATATTTTTTATTTCATTACGTGTGCTCAAGGCTCTTTGCAA
GCTTTGCGAAATGTCAATGAAATTACCTCAAAAACAGATTGGGTTATTGGACATTCTCATATTTCACTGTATGGTACTTT
TACATTTTTTGCGATAGCCGGAATTTATCAAGCTATTCCAACAATAGTGAAAAAACCATTATGGTCTACAAAGCTTGCTG
ATTGGCATTTTGCCTTAAATTTATGGGGAAGTTTATTATTTTTATTTTCTCTATGGCTAGGTGGTTTTTTGCAGGGATTG
ATGTGGGCTAACTGGGCAGAGGGATCTTCTTATGCAGAATTTCATGATAATTTGACTCGCATTCCCTTTATTCAAACTAT
GGCTGATATGCGCGACTGGTGGATTTTAAGGGGATTAGGGGGAATCATTATTTTAATCGGCAACATCTTATTTGCGATTA
ATATCTTTAATACAATTGTTTTAGAAAAACCTCGAGAAGTGAGATTGGCGGCATGA

Upstream 100 bases:

>100_bases
CCTCTGAACAAAATTGATAGAGAAATTTAGACAAAAAAGCGTTTTCAAGAATAAATTTTTACGATATTAAACTTTTAATT
CAAATTGCAAAGAGTGTGAC

Downstream 100 bases:

>100_bases
CGCAGGAAAATCAAAAAAAAGATAAGGCTTCTCAGCAAAATTCCTCTCCTTATGATTTTTTGCATCGTCTTGATAAATCA
GCCCTGTGGGTGATTATAGG

Product: putative cytochrome-c oxidase fixN chain

Products: NA

Alternate protein names: Cytochrome c oxidase polypeptide I homolog [H]

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MVTYDDRPAKLFLYPSIIFMIIGMIIGVFIAFNGFIFPDYFAGEYIHFGRVRPVHVGTVTLLWLLSVDIGLMYYFIPRLC
GISIWSSKLAFWGAALWWLSLTLGVNSFPWGTNFGWEYAELPDWVSWIPVKYLFVLGWIFIVINFFMTIANRRFEKLYVS
LWYSMGTLIWTTFVVFVGSIAINWLPEGMSRVNASWFYVHNLVGLIYTPMGLATAYYFLPKIAGTPIYSHRLSMIGFWSI
AFIYAWIGTHHIIHGPVSQWLQTTSIIFSIWMFIPVWTVVFNLFATLQKDWLKYLESAPIRFLMMGNIFYFITCAQGSLQ
ALRNVNEITSKTDWVIGHSHISLYGTFTFFAIAGIYQAIPTIVKKPLWSTKLADWHFALNLWGSLLFLFSLWLGGFLQGL
MWANWAEGSSYAEFHDNLTRIPFIQTMADMRDWWILRGLGGIIILIGNILFAINIFNTIVLEKPREVRLAA

Sequences:

>Translated_471_residues
MVTYDDRPAKLFLYPSIIFMIIGMIIGVFIAFNGFIFPDYFAGEYIHFGRVRPVHVGTVTLLWLLSVDIGLMYYFIPRLC
GISIWSSKLAFWGAALWWLSLTLGVNSFPWGTNFGWEYAELPDWVSWIPVKYLFVLGWIFIVINFFMTIANRRFEKLYVS
LWYSMGTLIWTTFVVFVGSIAINWLPEGMSRVNASWFYVHNLVGLIYTPMGLATAYYFLPKIAGTPIYSHRLSMIGFWSI
AFIYAWIGTHHIIHGPVSQWLQTTSIIFSIWMFIPVWTVVFNLFATLQKDWLKYLESAPIRFLMMGNIFYFITCAQGSLQ
ALRNVNEITSKTDWVIGHSHISLYGTFTFFAIAGIYQAIPTIVKKPLWSTKLADWHFALNLWGSLLFLFSLWLGGFLQGL
MWANWAEGSSYAEFHDNLTRIPFIQTMADMRDWWILRGLGGIIILIGNILFAINIFNTIVLEKPREVRLAA
>Mature_471_residues
MVTYDDRPAKLFLYPSIIFMIIGMIIGVFIAFNGFIFPDYFAGEYIHFGRVRPVHVGTVTLLWLLSVDIGLMYYFIPRLC
GISIWSSKLAFWGAALWWLSLTLGVNSFPWGTNFGWEYAELPDWVSWIPVKYLFVLGWIFIVINFFMTIANRRFEKLYVS
LWYSMGTLIWTTFVVFVGSIAINWLPEGMSRVNASWFYVHNLVGLIYTPMGLATAYYFLPKIAGTPIYSHRLSMIGFWSI
AFIYAWIGTHHIIHGPVSQWLQTTSIIFSIWMFIPVWTVVFNLFATLQKDWLKYLESAPIRFLMMGNIFYFITCAQGSLQ
ALRNVNEITSKTDWVIGHSHISLYGTFTFFAIAGIYQAIPTIVKKPLWSTKLADWHFALNLWGSLLFLFSLWLGGFLQGL
MWANWAEGSSYAEFHDNLTRIPFIQTMADMRDWWILRGLGGIIILIGNILFAINIFNTIVLEKPREVRLAA

Specific function: Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Co I is the catalytic subunit of the enzyme. Electrons originating in cytochrome

COG id: COG3278

COG function: function code O; Cbb3-type cytochrome oxidase, subunit 1

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the heme-copper respiratory oxidase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004677
- InterPro:   IPR000883 [H]

Pfam domain/function: PF00115 COX1 [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 54450; Mature: 54450

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS50855 COX1 ; PS00077 COX1_CUB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8282187 [H]