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The map label for this gene is fixO

Identifier: 46447611

GI number: 46447611

Start: 2356704

End: 2357951

Strand: Reverse

Name: fixO

Synonym: pc1977

Alternate gene names: NA

Gene position: 2357951-2356704 (Counterclockwise)

Preceding gene: 46447612

Following gene: 46447610

Centisome position: 97.66

GC content: 38.3

Gene sequence:

>1248_bases
TTGCATCGTCTTGATAAATCAGCCCTGTGGGTGATTATAGGTGTTATTCTCTTATTTTCTACCTCTATTATTGTTGTCTT
AATTGCTCCAACCTATGTCGATTCAACTTGGACAAGCCCAACAAGTCCTTACCAAGTTCAAATGTATGAAGTAGAAGATC
CTAACCTTTATATTAGTAATGCCTCTGTCGAAGGGAGTGATTTACAATATGTACGCCATTTAAAGCAGAATTATAGCCTG
TTAGCTTTCAAAGAATCTAATAACCTGCGTTTAGTCACTTCTCAAGGATTAGAGAAATATATCACGAAAGTAAATGATTC
AACGCTTAAGCTCACCTCACGTCTTTTATTGTTGAGAGAACCACAAGGTGAAGCTAAAAAACAGGCCGAGCAGCTATTAG
CCTCTCAACAATCAACAACGAAAATAGCTCAAAAAGAAGAGGATTCATCGGCAAATTTGGGAAAATTGAAATTTCAAGTT
TTGGAGTTATATGACCCCGAAATGCAAGAAGTGTTTTCTTTCGAACCTTCAGGGGGAATTTTGCAAAATTGGGTCGATGA
AAATTTCACAATTTTAGATGATAGTGTCAAACAGCCTTATCATCGAGATTATGGGGTCATTTATTCACTTAATCCTCAAG
AATTTCGCATTATTGAAGAAGGCCATGGCAATGCAAAAAGATGGCGATATGATCCGTTGGGTAGGCCTATTCAACAGATG
GATGAATTAAAAAGCCCTGCGATGGGTTTTCACTCAAGGCAAGATCTCATTCTTTTTGGTGAACATTTGTATGCAATTGA
AGGCTGCTGGTATTGCCATACCGACCAAACGCGCACACTAATTCAGGATACCGTTTTAAATGGATCAGACTCCTATCCAG
CTCCTCCCTCTTCTGCAAATGAGTATATTTATCAAAAAATTACTTTTGCTGGAACAAGACGGATTGGACCTGATATTTCT
CGCGTAGGAGTAAAAAAACCTAGTCGTGATTGGCATAAAGCTCATTTTTGGGCACCTAAAACGGCAAGTGCGGGATCTCT
GATGCCTTCTTTTCGACATTTTTTTGATGCTAATCCAAAGGAAACCGGAAAAAGTGCAATTGGTATTCCTAATTATCAAT
TTGAAGCAATTTATCAATATATGATGACCAAAGGAACTCGCATTACGGCTCCTAATCAGGCTTGGTGGTTGGGAAAAGAT
CCTATTAAAACAAAAGAAATTATTGAAGGCCAGCGTAAACTCCAATGA

Upstream 100 bases:

>100_bases
TTGTTTTAGAAAAACCTCGAGAAGTGAGATTGGCGGCATGACGCAGGAAAATCAAAAAAAAGATAAGGCTTCTCAGCAAA
ATTCCTCTCCTTATGATTTT

Downstream 100 bases:

>100_bases
ATCAATACGCAGTCATAGATGGATTCGGAATATATGGAAATTTATTACATTATGCATTGGTGATTAGTTTGGTTGGAGGT
GCTTTTATCATTTTTCTTTA

Product: putative cytochrome-c oxidase fixO chain

Products: ferricytochrome c; H2O

Alternate protein names: Cytochrome C Oxidase Cbb3-Type Subunit II; Cbb3-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Mono-Heme Subunit/FixO Superfamily; Cb-Type Cytochrome C Oxidase Subunit II; Cytochrome C Oxidase Cbb3-Type Subunit I; Bifunctional Cbb3-Type Cytochrome C Oxidase Subunit I/II; Cytochrome C Oxidase Mono-Heme Subunit; Cytochrome Oxidase Cytochrome C Subunit; Cytochrome C Oxidase Family Protein; Cytochrome-C Oxidase FixO Chain; Cytochrome C Oxidase Mono-Heme Subunit/Fixo; Cytochrome-C Oxidase Subunit II; Cytochrome C Oxidase Cbb3-Type Subunit I And II

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MHRLDKSALWVIIGVILLFSTSIIVVLIAPTYVDSTWTSPTSPYQVQMYEVEDPNLYISNASVEGSDLQYVRHLKQNYSL
LAFKESNNLRLVTSQGLEKYITKVNDSTLKLTSRLLLLREPQGEAKKQAEQLLASQQSTTKIAQKEEDSSANLGKLKFQV
LELYDPEMQEVFSFEPSGGILQNWVDENFTILDDSVKQPYHRDYGVIYSLNPQEFRIIEEGHGNAKRWRYDPLGRPIQQM
DELKSPAMGFHSRQDLILFGEHLYAIEGCWYCHTDQTRTLIQDTVLNGSDSYPAPPSSANEYIYQKITFAGTRRIGPDIS
RVGVKKPSRDWHKAHFWAPKTASAGSLMPSFRHFFDANPKETGKSAIGIPNYQFEAIYQYMMTKGTRITAPNQAWWLGKD
PIKTKEIIEGQRKLQ

Sequences:

>Translated_415_residues
MHRLDKSALWVIIGVILLFSTSIIVVLIAPTYVDSTWTSPTSPYQVQMYEVEDPNLYISNASVEGSDLQYVRHLKQNYSL
LAFKESNNLRLVTSQGLEKYITKVNDSTLKLTSRLLLLREPQGEAKKQAEQLLASQQSTTKIAQKEEDSSANLGKLKFQV
LELYDPEMQEVFSFEPSGGILQNWVDENFTILDDSVKQPYHRDYGVIYSLNPQEFRIIEEGHGNAKRWRYDPLGRPIQQM
DELKSPAMGFHSRQDLILFGEHLYAIEGCWYCHTDQTRTLIQDTVLNGSDSYPAPPSSANEYIYQKITFAGTRRIGPDIS
RVGVKKPSRDWHKAHFWAPKTASAGSLMPSFRHFFDANPKETGKSAIGIPNYQFEAIYQYMMTKGTRITAPNQAWWLGKD
PIKTKEIIEGQRKLQ
>Mature_415_residues
MHRLDKSALWVIIGVILLFSTSIIVVLIAPTYVDSTWTSPTSPYQVQMYEVEDPNLYISNASVEGSDLQYVRHLKQNYSL
LAFKESNNLRLVTSQGLEKYITKVNDSTLKLTSRLLLLREPQGEAKKQAEQLLASQQSTTKIAQKEEDSSANLGKLKFQV
LELYDPEMQEVFSFEPSGGILQNWVDENFTILDDSVKQPYHRDYGVIYSLNPQEFRIIEEGHGNAKRWRYDPLGRPIQQM
DELKSPAMGFHSRQDLILFGEHLYAIEGCWYCHTDQTRTLIQDTVLNGSDSYPAPPSSANEYIYQKITFAGTRRIGPDIS
RVGVKKPSRDWHKAHFWAPKTASAGSLMPSFRHFFDANPKETGKSAIGIPNYQFEAIYQYMMTKGTRITAPNQAWWLGKD
PIKTKEIIEGQRKLQ

Specific function: Unknown

COG id: COG2993

COG function: function code C; Cbb3-type cytochrome oxidase, cytochrome c subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.9.3.1

Molecular weight: Translated: 47441; Mature: 47441

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRLDKSALWVIIGVILLFSTSIIVVLIAPTYVDSTWTSPTSPYQVQMYEVEDPNLYISN
CCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEC
ASVEGSDLQYVRHLKQNYSLLAFKESNNLRLVTSQGLEKYITKVNDSTLKLTSRLLLLRE
CCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHEEEC
PQGEAKKQAEQLLASQQSTTKIAQKEEDSSANLGKLKFQVLELYDPEMQEVFSFEPSGGI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCHHHHHCCCCCCCH
LQNWVDENFTILDDSVKQPYHRDYGVIYSLNPQEFRIIEEGHGNAKRWRYDPLGRPIQQM
HHHHHCCCCEEECHHHCCCCCCCCCEEEECCHHHEEEEECCCCCCCCEECCCCCCCHHHH
DELKSPAMGFHSRQDLILFGEHLYAIEGCWYCHTDQTRTLIQDTVLNGSDSYPAPPSSAN
HHHCCCCCCCCCCCCEEEECCEEEEEECEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCC
EYIYQKITFAGTRRIGPDISRVGVKKPSRDWHKAHFWAPKTASAGSLMPSFRHFFDANPK
HHHHHHEEECCCCCCCCCHHHHCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHCCCHH
ETGKSAIGIPNYQFEAIYQYMMTKGTRITAPNQAWWLGKDPIKTKEIIEGQRKLQ
HCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MHRLDKSALWVIIGVILLFSTSIIVVLIAPTYVDSTWTSPTSPYQVQMYEVEDPNLYISN
CCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEC
ASVEGSDLQYVRHLKQNYSLLAFKESNNLRLVTSQGLEKYITKVNDSTLKLTSRLLLLRE
CCCCCCHHHHHHHHHCCCEEEEEECCCCEEEEEHHHHHHHHHHCCCCHHHHHHHHHEEEC
PQGEAKKQAEQLLASQQSTTKIAQKEEDSSANLGKLKFQVLELYDPEMQEVFSFEPSGGI
CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEEECCCCCHHHHHCCCCCCCH
LQNWVDENFTILDDSVKQPYHRDYGVIYSLNPQEFRIIEEGHGNAKRWRYDPLGRPIQQM
HHHHHCCCCEEECHHHCCCCCCCCCEEEECCHHHEEEEECCCCCCCCEECCCCCCCHHHH
DELKSPAMGFHSRQDLILFGEHLYAIEGCWYCHTDQTRTLIQDTVLNGSDSYPAPPSSAN
HHHCCCCCCCCCCCCEEEECCEEEEEECEEEEECCCHHHHHHHHHCCCCCCCCCCCCCCC
EYIYQKITFAGTRRIGPDISRVGVKKPSRDWHKAHFWAPKTASAGSLMPSFRHFFDANPK
HHHHHHEEECCCCCCCCCHHHHCCCCCCCCHHHHEECCCCCCCCCCCCHHHHHHHCCCHH
ETGKSAIGIPNYQFEAIYQYMMTKGTRITAPNQAWWLGKDPIKTKEIIEGQRKLQ
HCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ferrocytochrome c; O2

Specific reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA